PB000653.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000653.00.0
Entrez Gene ID	3417809
Full Name	conserved Plasmodium protein, unknown function
Synonyms	PB000653.00.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_664470.2	XP_669562.2	conserved Plasmodium protein, unknown function
XM_664470.1	XP_669562.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000653.00.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000653.00.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm06598	XM_664470.2 Latest version!	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_122460), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000653.00.0 ( XM_664470.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_669562.2 Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_122460), partial mRNA.

Price & Availability↑

CloneID	OPm06598
Clone ID Related Accession (Same CDS sequence)	XM_664470.2
Accession Version	XM_664470.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1551bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	conserved Plasmodium protein, unknown function
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036170). On Oct 24, 2017 this sequence version replaced XM_664470.1. COMPLETENESS: incomplete on both ends.

ATGAAAAGGG GAAAAAAAAC AAAGAAGAAT ATTAAATATA TAAGAGATCA AATAAAGGAA 
ATAGAATTAG AATCCAAAAT AATTAATAAA CACATTAAAA AATTGGAAGA GGAAAGAAAA 
ATATTTCAAT TGTCTACTGT TTTATTAGAA AAATACAGCT CTTTTATAAA CACAAAATTA 
GCTAATAATT TATCTATTCA TATTTTTAAT AACACATTTT TAAATAGCTG TGGAATTCTT 
TTTACTAATT ACCCCCATAA TGAAATATAT TATAACAATA TAAGTCCATA TCCCCAATAT 
GGAAATTATA CTATCAAACA TATTAGTTCA AATTATATTT GTAACGAAAA TGATAATAAA 
GAGAATAGTA AATATAATAA TATATTCCGG TTAAACTCAA AAAAGGGAAA ATATGAAGTG 
GAAAATATTA AAGCGGCATC AAACAAACTA GACGATAAAA TTAATAATCA AACAACGAGA 
ACCCATAGTT GTCATAATAT TTATATAAAA AACTATAAAA AATCAAAGGA TATTTTGAAA 
AATAAGAATA ATGTATTTAA AATAAAAAGG GAAACGCTTC ATTCCAATTT TAAAGATCCT 
ACTAATATGC TATTCGAAGA AAGCCACTTT AAAAAGCTAA ATAATAATTA TACCATAACA 
GATAACAAAC TGATAGAAAG TGAAAACTAT ATGTCAAGGG ATGATGAAAT AAATACAAGC 
ATCACTATTT TAAATGAAAA AAATAACATG AAAAATTATA ATAAGCTAAA ATTAATGCAA 
ACGGAAATTC AAAAAGAGAA AAAACCATAT ATGGAACAAC TGGATTTGAA TTTAAAAGAA 
TCTATAAACG ATTCTACTAG TTCAAATGAT GAATATAACG CAGATAGTTA TATAGAAAGT 
CAAAATGATT TAAATGACAT TGATCCATAT ACTGATTTAA TTAAAAATGA TAAAATTCTA 
CTAACCTATG AAAATCAGAA TCTAAATGAA GAAAAAAGTA GTAGTACATT TGGAGGTTTC 
ATGAACAATA TAAAAAAAAT TTTTTTTAAT GATCAAAAAA ATATATTAAG TTATAAAAAC 
AGTGAAAGTG ACTTAATTAA TGAATTGGAA CTCGAGAAAC AGCATACAAA TGAAAAAAAA 
AAAAAAAAAA ATACAAACAA AACAGACATG AGTATATTAA AATTTAAATG TGTAATTAAA 
TCTAAAAGAA TAAAAATTTA TTTATGTGTA TGCCCTAATT GCACAAAACA ATTTTATCTT 
TTAATAAAAA AATTCCCAAA TAAAAAAATT ATATCAAAAG TTTTTCATCC ATTCCTTTTT 
TCTTCCTTTG TTGAAAGTTT AAAGAAAAAT AATGACGACT TTTTTTATCA AAAAGATAAA 
CATAAATGGG AACAGTTATC TAATATGGAA AATCAATTTA ATGCATATCA TGATAATACT 
CTTTCATTTA ATTTCCCTGA CAGCAACTCT AAATTTTGCA ATTGCTATAT AGGAATAGAA 
GAGAGGGATA ATAATATTTT TGAGAACTTG GATATGCTAG TTTATTTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_669562.2
CDS	1..1551
Translation	MKRGKKTKKNIKYIRDQIKEIELESKIINKHIKKLEEERKIFQLSTVLLEKYSSFINTKLANNLSIHIFNNTFLNSCGILFTNYPHNEIYYNNISPYPQYGNYTIKHISSNYICNENDNKENSKYNNIFRLNSKKGKYEVENIKAASNKLDDKINNQTTRTHSCHNIYIKNYKKSKDILKNKNNVFKIKRETLHSNFKDPTNMLFEESHFKKLNNNYTITDNKLIESENYMSRDDEINTSITILNEKNNMKNYNKLKLMQTEIQKEKKPYMEQLDLNLKESINDSTSSNDEYNADSYIESQNDLNDIDPYTDLIKNDKILLTYENQNLNEEKSSSTFGGFMNNIKKIFFNDQKNILSYKNSESDLINELELEKQHTNEKKKKKNTNKTDMSILKFKCVIKSKRIKIYLCVCPNCTKQFYLLIKKFPNKKIISKVFHPFLFSSFVESLKKNNDDFFYQKDKHKWEQLSNMENQFNAYHDNTLSFNFPDSNSKFCNCYIGIEERDNNIFENLDMLVYL

Target ORF information:

RefSeq Version	XM_664470.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_122460), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_664470.2

ORF Insert Sequence:

ATGAAAAGGG GAAAAAAAAC AAAGAAGAAT ATTAAATATA TAAGAGATCA AATAAAGGAA 
ATAGAATTAG AATCCAAAAT AATTAATAAA CACATTAAAA AATTGGAAGA GGAAAGAAAA 
ATATTTCAAT TGTCTACTGT TTTATTAGAA AAATACAGCT CTTTTATAAA CACAAAATTA 
GCTAATAATT TATCTATTCA TATTTTTAAT AACACATTTT TAAATAGCTG TGGAATTCTT 
TTTACTAATT ACCCCCATAA TGAAATATAT TATAACAATA TAAGTCCATA TCCCCAATAT 
GGAAATTATA CTATCAAACA TATTAGTTCA AATTATATTT GTAACGAAAA TGATAATAAA 
GAGAATAGTA AATATAATAA TATATTCCGG TTAAACTCAA AAAAGGGAAA ATATGAAGTG 
GAAAATATTA AAGCGGCATC AAACAAACTA GACGATAAAA TTAATAATCA AACAACGAGA 
ACCCATAGTT GTCATAATAT TTATATAAAA AACTATAAAA AATCAAAGGA TATTTTGAAA 
AATAAGAATA ATGTATTTAA AATAAAAAGG GAAACGCTTC ATTCCAATTT TAAAGATCCT 
ACTAATATGC TATTCGAAGA AAGCCACTTT AAAAAGCTAA ATAATAATTA TACCATAACA 
GATAACAAAC TGATAGAAAG TGAAAACTAT ATGTCAAGGG ATGATGAAAT AAATACAAGC 
ATCACTATTT TAAATGAAAA AAATAACATG AAAAATTATA ATAAGCTAAA ATTAATGCAA 
ACGGAAATTC AAAAAGAGAA AAAACCATAT ATGGAACAAC TGGATTTGAA TTTAAAAGAA 
TCTATAAACG ATTCTACTAG TTCAAATGAT GAATATAACG CAGATAGTTA TATAGAAAGT 
CAAAATGATT TAAATGACAT TGATCCATAT ACTGATTTAA TTAAAAATGA TAAAATTCTA 
CTAACCTATG AAAATCAGAA TCTAAATGAA GAAAAAAGTA GTAGTACATT TGGAGGTTTC 
ATGAACAATA TAAAAAAAAT TTTTTTTAAT GATCAAAAAA ATATATTAAG TTATAAAAAC 
AGTGAAAGTG ACTTAATTAA TGAATTGGAA CTCGAGAAAC AGCATACAAA TGAAAAAAAA 
AAAAAAAAAA ATACAAACAA AACAGACATG AGTATATTAA AATTTAAATG TGTAATTAAA 
TCTAAAAGAA TAAAAATTTA TTTATGTGTA TGCCCTAATT GCACAAAACA ATTTTATCTT 
TTAATAAAAA AATTCCCAAA TAAAAAAATT ATATCAAAAG TTTTTCATCC ATTCCTTTTT 
TCTTCCTTTG TTGAAAGTTT AAAGAAAAAT AATGACGACT TTTTTTATCA AAAAGATAAA 
CATAAATGGG AACAGTTATC TAATATGGAA AATCAATTTA ATGCATATCA TGATAATACT 
CTTTCATTTA ATTTCCCTGA CAGCAACTCT AAATTTTGCA ATTGCTATAT AGGAATAGAA 
GAGAGGGATA ATAATATTTT TGAGAACTTG GATATGCTAG TTTATTTATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000653.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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