PHATRDRAFT_42497 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

Gene
Clones
gRNAs

Summary

Gene Symbol	PHATRDRAFT_42497
Entrez Gene ID	7196680
Full Name	predicted protein
Gene Type	protein-coding
Organism	Phaeodactylum tricornutum CCAP 1055/1

mRNA and Protein(s)

mRNA	Protein	Name
XM_002177008.1	XP_002177044.1	predicted protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP, Rayko E, Salamov A, Vandepoele K, Beszteri B, Gruber A, Heijde M, Katinka M, Mock T, Valentin K, Verret F, Berges JA, Brownlee C, Cadoret JP, Chiovitti A, Choi CJ, Coesel S, De Martino A, Detter JC, Durkin C, Falciatore A, Fournet J, Haruta M, Huysman MJ, Jenkins BD, Jiroutova K, Jorgensen RE, Joubert Y, Kaplan A, Kröger N, Kroth PG, La Roche J, Lindquist E, Lommer M, Martin-Jézéquel V, Lopez PJ, Lucas S, Mangogna M, McGinnis K, Medlin LK, Montsant A, Oudot-Le Secq MP, Napoli C, Obornik M, Parker MS, Petit JL, Porcel BM, Poulsen N, Robison M, Rychlewski L, Rynearson TA, Schmutz J, Shapiro H, Siaut M, Stanley M, Sussman MR, Taylor AR, Vardi A, von Dassow P, Vyverman W, Willis A, Wyrwicz LS, Rokhsar DS, Weissenbach J, Armbrust EV, Green BR, Van de Peer Y, Grigoriev IV
Nature456(7219)239-44(2008 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PHATRDRAFT_42497 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_42497 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPb01218	XM_002177008.1 Latest version!	Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	29-31	$1301.30 $1859.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PHATRDRAFT_42497 ( XM_002177008.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002177044.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

Price & Availability↑

CloneID	OPb01218
Clone ID Related Accession (Same CDS sequence)	XM_002177008.1
Accession Version	XM_002177008.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 7098bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497456000000
Organism	Phaeodactylum tricornutum CCAP 1055/1
Product	predicted protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011669). COMPLETENESS: incomplete on the 5' end.

ATGGAGAAAG CGACAACGAC AACGACACAA GAATCCCCCG TTATTGCGGG GTCGTCCTCG 
TCGAAGGCAC CGACGCCTCC TCGACCTTCA CCTCGGCAGC TCGTACCCGA TATCGACTTT 
CCCACGTCAG TGGAAGAAGC CGGAGCCTTG CTGGGGGCCA CGATTACAAC TTGCGGCAAA 
CAAGTCGGAA CGACACGCGC ACCGCCGCCC GGGTTGCACA GTTCCTTCGG GACCGCCCAA 
CCCGTACCCA GTTCCATCCT GCTCACGCGT TTGCACGGTC TGCGGGCCTG GCTCCGAGCC 
TCCGTCACCG ACACCCCACT CGTCGCGGCA CCCTCCATAC TCGCTGTATT GATGAAACTC 
ATGGGCGTAT CCAATACCAT GAGTGCCTCC TACAGTCAAA CAGCCGCCGC GTCGGTCTGG 
AACGACACCA CCCAAGCCAA TCGCGCCGTG CTGGAAACCC CACCCATGTT GTCGACGCCC 
ATCCGTGCCC TCTGGGTCGA CTGTGTCGTG CTCTGTCACG TACTGGCACA GGGACTCACC 
GGGACGGCGA GGATTGATAC CTTGCAATTC TTGCGGAAAA TGTTGGCCTT GGCGACGCTC 
CACCCACGCT CCGCCAAGGC CGCCGGAGGC GTACGCGTCG CCGCACTCGA TCTAGTCACT 
GGACTCTTGC ACCATCAACC CAACGACAAC ACCATCAAAA CTAACGCAAA CAACAATAAC 
AGCAACAATA CGGTGCAACG CAATTCCCCA ACGCTGGCCA AAACGTTGGC TCCGTGGAGT 
TTGGAAACAC TCCAAACCTG TTTGCGAGCG TTGCGTTCGG CCGGCAACGG TGAACCGACC 
TATCGCGTGG CCGCCGTGAG AACCGCCTGT GCTACCGTCG TGGCCTGTCG CAACGCCTTT 
CTACCCACTC GTATGGGGTC TTCCTTGATC GACCCGGATA CCGCCACTGC TACGGATCGA 
CTGGTCTTGC CCGGCGCCAT GGAAGACAAG GCCGTACTCG AAGCCGTCAA AGTATGCAAA 
CAAGCCGTCC TGGATAAGTT TCCGGAAGTC CGTGCCCATG CCGGTATACT GGCGTCGCTG 
TTGACCCCCC TTCTAGTCAC CAACCTACCG CCCTCTTCTT CCGCACACGG CATTGACGGA 
CGCCTGCACG CCTTGGAAGA CCTCCTCCAG CTGGCGTACA AACACCTCGA CGACGAGAGT 
CCCGAGACGG CCACGCACTG GGCCGAAACT CTTGCCCGGG GTGTGGCAAC GGCAATTCAG 
TTTCATCAAG CGGAAAAAGA CACTGGTGAC GGTCCCAAAG GAGGTGTCGA CCAAGGCGCG 
ATACCGCGTT TTGGATCGCG CAAAGTCCTG GGTATTGCGC ACTCGTGTAC GTCGCTCAAG 
AACGCCGTAC GTTACTGGAT CGCGCAATTT GTCAAAGTGG GCGGAGAATT GGTGGCGCCC 
CGTTTGGGAG GATCCTACGC GACCGGAGGA CGAGCGGTGC GGATTGGTAT CAGTATGGTA 
CTCACCAAAA TACTGCGACT CCAAGTCGTC CTCGGAGCCG TGGGGGAAGA TCGGAGTGCG 
TCTCTGAAAG AGATCCTGGA TCTAATATTG AATGGACTCG GTCCGGACCT GGAGAAACAA 
CTCCGACCAC CCGATACGCC GGCTTCGGGA CCAGCGAATC CCTTGTTCGG GGCCACCCGG 
ACCTGGTCCA AGAACGATGC CGGCCTAGCC CGGTTGGCCC TCAGCCGCGT CTTGCGCGAA 
GGTCTCTCCG AAGTCACGCC CGAACCTACG CAAATCAACT TTTTGCACGA ATTGATTCTG 
TGTCTACCGG GTAAGGGAGA CGCCGAATCC AACGAGGCGC CCGCCGTCCA ATGGAATGCG 
AATCAATTGC AGATCGTGCT AGTTGAGATT TCGCATTTGC TGGCGGCCTT GGGCGAAGCG 
GCCGCTTCTA GAATAGACGA CGCCGTGATA AGGCTGGAAA TATGCCTGGA ACACATGGAT 
CAAGGGGTGC GGCACGAAGC AGCGATTGCC TGTGCCTCGT TAACGGCCAG CTTTCCAACG 
GAAGGTCGCA AGCTGGTACG GTCCTCGATC GATGAGATGC AACTCCATCA CGCGCAATTG 
GTCACGTTGG CTTCGAGCTC GTCGGATGCG AAGGAAGAAC CGGATGCCGG GATACGGATG 
TTTCGACGTC CCAAGGAGAA GGAGCATGAC CCATCCGCTC GTCATCAATG TGCGATTCAC 
GGCAGGGCCT TGATGATTTC CATCCTTGTG CGAGATCTTA CTAGTCTTCC AGGCGGGTTG 
CCGACGGAAT TATTAAGCGC CGCACTGTCC GTGGCGGAAA TAATGCTTTC GTGTCAATTC 
CATAAACCGA TCATCCAGGC CAATGCCATG TCGGCTTGCA ACTGCGTCAA GGCAGGCTTT 
GCTATTATCT CGGGCGTGCT GGCGAACGGT CCGAAAGCTG CGGCACCGAG TGTATCGCTA 
ATCTTCAATT CCTGGCAAAA AGCAATAAGC AGTATCACAG GCGGCGGCAA GATTCTCAGT 
CCGAGACACG AGCTGCTTTG CGTGGATGCA ATGCTCTCGT CGGTGGTTGT CTTTCTCAAG 
TATTGCTCCG AGCTTTTACT TTCAGTACCA GAGGCTTTGA CCCAGGTGAC GGTCCTTTTG 
GAAAACGTCC TGCCGATGCT TTTGCCGGAC GGAACGTTTG GAAGTCTTCC GTTTTCGGCA 
CCGGTTATGG CTCGACTAGA AAGTTCCAGG TCCTCCCTCC TTGAGGCGTT TGCGTGGTTG 
CCATCCGGTT CCTTCCCGAT GGTTGCCGAT ACAGTCTTTT CATTTGCCGC CGAACACATT 
CGAGCAGCCG TGGAGGGGGA GGTATCCTGC TCGATTTTAC ATGCGTTGGT GAGCCGGGAG 
GACTCTATTC TGGACGCCAA GACCATGAGT CGAGCGAGGC GAGACGGGCA AATTGGGGGA 
GCGCGTGATC TGGAAGAAAC AATCCTTTTG CTTACAGGCG AGATCGCACA CCCCGGGGAA 
AGAGAGGCCG TTCTGCATTT ATCCATGTAC AATCGATCGG AGCCAGACCC CAGCGTCTTT 
CGGGGTAGCC GCATTCTGGG AATTTGCGCA AAAGATGCTA GTGGGGAGAA ACCTCCGACG 
CCTCTACACG GGGTTGGAAC GTGGAGAAAA CCGATCGATC CGTCTTGCTC TTCCAAGGTC 
CGTCTTGTCG ATGCCGCTAT ACAGGCATTT TCCGCAACCT TTGGATTGAA GAGTGGTTCT 
GAACAACAGG GCGCAATGGA CATGTTGGAA TCTCTGGTAC CGCCATTACT TGCTCAGCTG 
GCTCGCGCAA TTGGTGTGAA CTCTGCCTTG GTCGATCAGA GCCCGAGGTC CAAGGCCAAG 
GAGGATTCTT CCGCCGTTGC CAACATTACT GCCGTTCTTC TGTCGTGTCT AAAAGCACTA 
CCACTCCACG AGACTAGCCA CAACGTTCCC CTTGGCCTGG GACCGCCGTG GATGAACAAA 
GCCAAAGATC TTCTTCTCAC TGTATTACCT TCCCCTTCCA GCACTGTTCG TCGTGCCGCA 
GCGGAAGGTC TCGCTCTACT CGCAACTTTG GGTGTTTCGG AAGACGCACA CTTTCTGCAA 
AGTAAGGTCC TTCATTCTCT GGATGAAGTG ATGCAAGGTA ACAAACCAGA TGGAAAACCC 
CGAGCGATTG CATTGGAACC AGTCTCAGCA GCGCGTGCGG GATCTCTACT TACCTTGGCT 
TGCATTCAGC GAACTGCGTT CAACGTTGCA AAGAAACAAA TTGCAAGAGC ACGATCTCGC 
GTGAATAATT CGAAGGACGT AGAATCAAGA CGGGCTAGTG AGCTGCCACT TCTACAAATG 
ATGACTCGGA TCCTCCCCTC TATCGCATGC TCGGGATTTC GCGATTTTTT TGTCGTGAGA 
ACGTACGCCC TGCACTCTTT TTCTGTTCTC TTGATATATT CTGAGCGTCT CGAGAAGACA 
ACTGATCTGG ACAAAGGGGA TAAACAGCTC TTGCGAAAGG CGGTGGAACT CGTCGAAGAT 
AATTTTGCTG CGTCCATGAC CATTTCTTCC ACAGAGATGG ACCGCGGCCA GGAAGCGGAA 
AAGATGACCT CGGAAGTCGC ATTTTTATCC GTACTATTGC GATTAATGTC GTTTCTGGTT 
CAGACAGTCT ACCATCTTCA AGATGAAGAC CCCGGCATTG GCGAGCGCTT CATACTGATT 
GCAAGGCTTA CTCTTGAGCT TTATGGATCG CATCCTGTTG TCTTTACTGA AGCGATGGCA 
TTCTTTGAAG TCACGGCTGG CCATCGCCAA CTTATTCCCT TACCATGGGA TAAAATCGAC 
TACAGCGAGA GTCCCTTGTT CGCAAGTATT TCGAGTATTC AATCCTCCTT GGCACCAATT 
CGTCCAGCTC TTTTTGCATT TGCACCTTGG GAGCAGCCTC GCAATTTGTC GGCCATTAAT 
ATACGTGCCT CGGGGATAGC TCTTCAGTCG CTGACCCAAT CAAATGTCTC TGTCGTAGAT 
TGGTGCAGCT TTTCGATCGT ATCCGCGTTG TTTGCTTCGC TGGAATCAAC ATCTGGGAAA 
GGGTTCTTTG GCAGAACTAC CTTTCTCCGA TCGCTGGCTG TGCCAAGACA TACGGAAGTT 
TCGTTTCATG AATGGAAAAA TGTAGAGCTC GATCTCACCG ATACCATTCG AACCATCTTC 
TATCTAAATA GTGCTAAAAC GGCTGTCTCG TCTTCAAATG TTCTGCGGTG GATCCTTTTC 
GCACGAGCTC TGTTGGTCAA ATCGTGTCCT TTAGACTACA CCGACAAGGA AGAGGAAGTT 
TCAATCGATT CTGTTGTCCA GGCTGCAAGC CGCAGATCGC ATCAGGACGT CTCGCTGGTC 
TATACTGCAT CCAGCGCTGT CCGATGGCAA GTCAAATGCA TTGCGGCACA AATTGTGGAA 
TTTGCCTTGG ATGCTCTTTT ACAAAACACG CCGGAAAATG CTGAAGTCGT ATATGGCGAC 
GCGAAGGACC AATGCGCGAA GGAACTCGAA AAAGCTAAAA AAAACGACAG CGGGCTTCCA 
GATTCAAGAC TTGTGTTCCA TCTCCAAGAA ATCTTATCTG CGGTGTGCAT GAGCACGGTA 
GCCGTGGTCG ACCAGGCGGA GGTGCATTCG TTGCAAGTCT CGGCAATGTA CGCTTTGACG 
ATGCTAATTT TAGCATTTGC AGAGTCGCCC GACCCGGAGC TTCCACAGTC TCGCATCTTG 
GATCAATATG CCCAGCAGAT TTTTTCTGCT GTCAAGCATG GTTTAGAATT GTCCACTTCG 
AGCCCCTCTA CCGCTTGTTT TCAGTTGTAT GTAGCCTCCT GTTACAGTAT GAGTGCACTG 
GTAGAGAGCG GAGTCACAAA AGATCCAATG GTGCTAAAGC GCTTGCTTCG TCCTATAGTT 
CCGAGGTCAG ACGAAACTCC TTTGTTTATG CATTCGGAAC CATATCCAGC TGAGCTCACG 
AAAATTTCGG AAGAAGGAGT TCACGAAAAT CGGCGTGTTC GACACTTGAA GAAGATCGCC 
CAAGTTTGGT GCACGAGCAA GCTTTTGATC GGAAATGAAC CCTTGTCAGA ATATATTTTA 
TTGGTTTCCA AGGATTTGAT CAAAGACCCG CTCCATATTG CTGTGCACAG TGCGGCATTT 
GCTTTCGATG GAGCCCGGTT GCTAATTTCG AGCCATTTTT CTTTGACCGG GGCTTGCCCT 
TGTTATAGAA CATCCGAAGC GGATGAGAAA ATGGCATGTG AACGAGGGTT TTTGTTCGAA 
TGCGCGGACG ACATCGATGA TTCAACCAAG ACCCTACTCA TGTCTCAGTG GTCGTATTGC 
GCTAGTACTG CAATCAAGCC TTTGGTCAGT TCGATGGACT CAGAGAATGG AAAGTTCAAG 
GTTCTATGCG ATGGGTGGAT AACGGTCTTG ACTCCGCTTT TACTCGAAGG CGTACATCAC 
GGCTTGTTGG CTTGCACTAG TGGGATTAAT CTCCCTTGTA TGGATGCAAC AAACGTGACT 
GTTGATTGCT TACGGGGTTT AAGCTGTTTG ACTGAAGCTG GACCGGAAGT TTTGTGCAAG 
ACACAGCACT TTAGCGACGT TGAGAGGCTG CTAAGAACGA TGCTGCAGAA GGTGTGGCTT 
CCTACTTTAC GCAATGAGAA ATTGACGGTC GACTCGAAAA TTGCGAAGGA AATGTGCCGT 
TTGGTCAGAA GTTTAGCAGA TTTGATGCCA TTCATTGCCA GTGATGAAAG TACTTTACTC 
GTCACTGTTC TGACTCCGCT GGAGCTTCTC GAACGTGCCA TGTTTGACTG CGAAATTTCT 
GCGGTCGCCG ACGAGATTGT TTCGACTTGC CTCGATGGTA TGACCAAATT CATTGCGCAC 
GGAAAAGTAA GCGAATCATT GCTGGAAGCG ATGTTGCATT TGTTGCTCCA AAGGATTCTA 
GTGTCAGAGA GGTCGCTTTC TGAACAGACC ACTGAGTCCT CCAAAGTTCT ACTGAAGCAA 
TGTTTCAGCA GCGGTATGGT GAATGCACGC CGCCGGAACA CCATCGCGGC TGATTTGGCG 
CACGTCGGTA ACTGGGATAC GTGGCTGGTC GTGTTTGCTT CGGACGACGG GTCGTCCTCG 
TGGAAGAGTC TAGACGCTGT TTCCGAATGC CTGCAAACCC CGGGTGGACC TCAAATGGCA 
TTGCTGGCCA AACTTTGTGC CTTTGCCCAA GGCTGCCCGA TTTCGAGTCC TTTGTTACAA 
CTATTGTTGC ATCGGGTTGG CGCCGACGTC GTCGGCACGT TGTATCTGTA CGGAACGCTG 
CAAATACCCG GCTCGGCGCG TCTCCACCGA CAAAAAGCGT GCGCCGACGC CTTGAAGCTG 
TCTCTAATTG GTTACCAGCA AGTGGTCGCC ACGAAGTCGG ACGACCGCAT CGCGCAGTAT 
CTCTCGTTGC TGTTCGAGAC TATCGTGGCC GTGTTGCGGT ACAACGGTGT CCCGAATCAT 
CCGTCGCCGC AACACGAGAG CGACCCAGCG TTGGGTCGCA TGTCGGCCCA GGCCATCTTA 
ATGACGGCAA GGACGACGCC GGTTGCCTTT AAAACGACAA CCGCCCTTTG CTTGAGTTTG 
CCGTCCGTGC CGAAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002177044.1
CDS	1..7098
Translation	MEKATTTTTQESPVIAGSSSSKAPTPPRPSPRQLVPDIDFPTSVEEAGALLGATITTCGKQVGTTRAPPPGLHSSFGTAQPVPSSILLTRLHGLRAWLRASVTDTPLVAAPSILAVLMKLMGVSNTMSASYSQTAAASVWNDTTQANRAVLETPPMLSTPIRALWVDCVVLCHVLAQGLTGTARIDTLQFLRKMLALATLHPRSAKAAGGVRVAALDLVTGLLHHQPNDNTIKTNANNNNSNNTVQRNSPTLAKTLAPWSLETLQTCLRALRSAGNGEPTYRVAAVRTACATVVACRNAFLPTRMGSSLIDPDTATATDRLVLPGAMEDKAVLEAVKVCKQAVLDKFPEVRAHAGILASLLTPLLVTNLPPSSSAHGIDGRLHALEDLLQLAYKHLDDESPETATHWAETLARGVATAIQFHQAEKDTGDGPKGGVDQGAIPRFGSRKVLGIAHSCTSLKNAVRYWIAQFVKVGGELVAPRLGGSYATGGRAVRIGISMVLTKILRLQVVLGAVGEDRSASLKEILDLILNGLGPDLEKQLRPPDTPASGPANPLFGATRTWSKNDAGLARLALSRVLREGLSEVTPEPTQINFLHELILCLPGKGDAESNEAPAVQWNANQLQIVLVEISHLLAALGEAAASRIDDAVIRLEICLEHMDQGVRHEAAIACASLTASFPTEGRKLVRSSIDEMQLHHAQLVTLASSSSDAKEEPDAGIRMFRRPKEKEHDPSARHQCAIHGRALMISILVRDLTSLPGGLPTELLSAALSVAEIMLSCQFHKPIIQANAMSACNCVKAGFAIISGVLANGPKAAAPSVSLIFNSWQKAISSITGGGKILSPRHELLCVDAMLSSVVVFLKYCSELLLSVPEALTQVTVLLENVLPMLLPDGTFGSLPFSAPVMARLESSRSSLLEAFAWLPSGSFPMVADTVFSFAAEHIRAAVEGEVSCSILHALVSREDSILDAKTMSRARRDGQIGGARDLEETILLLTGEIAHPGEREAVLHLSMYNRSEPDPSVFRGSRILGICAKDASGEKPPTPLHGVGTWRKPIDPSCSSKVRLVDAAIQAFSATFGLKSGSEQQGAMDMLESLVPPLLAQLARAIGVNSALVDQSPRSKAKEDSSAVANITAVLLSCLKALPLHETSHNVPLGLGPPWMNKAKDLLLTVLPSPSSTVRRAAAEGLALLATLGVSEDAHFLQSKVLHSLDEVMQGNKPDGKPRAIALEPVSAARAGSLLTLACIQRTAFNVAKKQIARARSRVNNSKDVESRRASELPLLQMMTRILPSIACSGFRDFFVVRTYALHSFSVLLIYSERLEKTTDLDKGDKQLLRKAVELVEDNFAASMTISSTEMDRGQEAEKMTSEVAFLSVLLRLMSFLVQTVYHLQDEDPGIGERFILIARLTLELYGSHPVVFTEAMAFFEVTAGHRQLIPLPWDKIDYSESPLFASISSIQSSLAPIRPALFAFAPWEQPRNLSAINIRASGIALQSLTQSNVSVVDWCSFSIVSALFASLESTSGKGFFGRTTFLRSLAVPRHTEVSFHEWKNVELDLTDTIRTIFYLNSAKTAVSSSNVLRWILFARALLVKSCPLDYTDKEEEVSIDSVVQAASRRSHQDVSLVYTASSAVRWQVKCIAAQIVEFALDALLQNTPENAEVVYGDAKDQCAKELEKAKKNDSGLPDSRLVFHLQEILSAVCMSTVAVVDQAEVHSLQVSAMYALTMLILAFAESPDPELPQSRILDQYAQQIFSAVKHGLELSTSSPSTACFQLYVASCYSMSALVESGVTKDPMVLKRLLRPIVPRSDETPLFMHSEPYPAELTKISEEGVHENRRVRHLKKIAQVWCTSKLLIGNEPLSEYILLVSKDLIKDPLHIAVHSAAFAFDGARLLISSHFSLTGACPCYRTSEADEKMACERGFLFECADDIDDSTKTLLMSQWSYCASTAIKPLVSSMDSENGKFKVLCDGWITVLTPLLLEGVHHGLLACTSGINLPCMDATNVTVDCLRGLSCLTEAGPEVLCKTQHFSDVERLLRTMLQKVWLPTLRNEKLTVDSKIAKEMCRLVRSLADLMPFIASDESTLLVTVLTPLELLERAMFDCEISAVADEIVSTCLDGMTKFIAHGKVSESLLEAMLHLLLQRILVSERSLSEQTTESSKVLLKQCFSSGMVNARRRNTIAADLAHVGNWDTWLVVFASDDGSSSWKSLDAVSECLQTPGGPQMALLAKLCAFAQGCPISSPLLQLLLHRVGADVVGTLYLYGTLQIPGSARLHRQKACADALKLSLIGYQQVVATKSDDRIAQYLSLLFETIVAVLRYNGVPNHPSPQHESDPALGRMSAQAILMTARTTPVAFKTTTALCLSLPSVPK

Target ORF information:

RefSeq Version	XM_002177008.1
Organism	Phaeodactylum tricornutum CCAP 1055/1
Definition	Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002177008.1

ORF Insert Sequence:

ATGGAGAAAG CGACAACGAC AACGACACAA GAATCCCCCG TTATTGCGGG GTCGTCCTCG 
TCGAAGGCAC CGACGCCTCC TCGACCTTCA CCTCGGCAGC TCGTACCCGA TATCGACTTT 
CCCACGTCAG TGGAAGAAGC CGGAGCCTTG CTGGGGGCCA CGATTACAAC TTGCGGCAAA 
CAAGTCGGAA CGACACGCGC ACCGCCGCCC GGGTTGCACA GTTCCTTCGG GACCGCCCAA 
CCCGTACCCA GTTCCATCCT GCTCACGCGT TTGCACGGTC TGCGGGCCTG GCTCCGAGCC 
TCCGTCACCG ACACCCCACT CGTCGCGGCA CCCTCCATAC TCGCTGTATT GATGAAACTC 
ATGGGCGTAT CCAATACCAT GAGTGCCTCC TACAGTCAAA CAGCCGCCGC GTCGGTCTGG 
AACGACACCA CCCAAGCCAA TCGCGCCGTG CTGGAAACCC CACCCATGTT GTCGACGCCC 
ATCCGTGCCC TCTGGGTCGA CTGTGTCGTG CTCTGTCACG TACTGGCACA GGGACTCACC 
GGGACGGCGA GGATTGATAC CTTGCAATTC TTGCGGAAAA TGTTGGCCTT GGCGACGCTC 
CACCCACGCT CCGCCAAGGC CGCCGGAGGC GTACGCGTCG CCGCACTCGA TCTAGTCACT 
GGACTCTTGC ACCATCAACC CAACGACAAC ACCATCAAAA CTAACGCAAA CAACAATAAC 
AGCAACAATA CGGTGCAACG CAATTCCCCA ACGCTGGCCA AAACGTTGGC TCCGTGGAGT 
TTGGAAACAC TCCAAACCTG TTTGCGAGCG TTGCGTTCGG CCGGCAACGG TGAACCGACC 
TATCGCGTGG CCGCCGTGAG AACCGCCTGT GCTACCGTCG TGGCCTGTCG CAACGCCTTT 
CTACCCACTC GTATGGGGTC TTCCTTGATC GACCCGGATA CCGCCACTGC TACGGATCGA 
CTGGTCTTGC CCGGCGCCAT GGAAGACAAG GCCGTACTCG AAGCCGTCAA AGTATGCAAA 
CAAGCCGTCC TGGATAAGTT TCCGGAAGTC CGTGCCCATG CCGGTATACT GGCGTCGCTG 
TTGACCCCCC TTCTAGTCAC CAACCTACCG CCCTCTTCTT CCGCACACGG CATTGACGGA 
CGCCTGCACG CCTTGGAAGA CCTCCTCCAG CTGGCGTACA AACACCTCGA CGACGAGAGT 
CCCGAGACGG CCACGCACTG GGCCGAAACT CTTGCCCGGG GTGTGGCAAC GGCAATTCAG 
TTTCATCAAG CGGAAAAAGA CACTGGTGAC GGTCCCAAAG GAGGTGTCGA CCAAGGCGCG 
ATACCGCGTT TTGGATCGCG CAAAGTCCTG GGTATTGCGC ACTCGTGTAC GTCGCTCAAG 
AACGCCGTAC GTTACTGGAT CGCGCAATTT GTCAAAGTGG GCGGAGAATT GGTGGCGCCC 
CGTTTGGGAG GATCCTACGC GACCGGAGGA CGAGCGGTGC GGATTGGTAT CAGTATGGTA 
CTCACCAAAA TACTGCGACT CCAAGTCGTC CTCGGAGCCG TGGGGGAAGA TCGGAGTGCG 
TCTCTGAAAG AGATCCTGGA TCTAATATTG AATGGACTCG GTCCGGACCT GGAGAAACAA 
CTCCGACCAC CCGATACGCC GGCTTCGGGA CCAGCGAATC CCTTGTTCGG GGCCACCCGG 
ACCTGGTCCA AGAACGATGC CGGCCTAGCC CGGTTGGCCC TCAGCCGCGT CTTGCGCGAA 
GGTCTCTCCG AAGTCACGCC CGAACCTACG CAAATCAACT TTTTGCACGA ATTGATTCTG 
TGTCTACCGG GTAAGGGAGA CGCCGAATCC AACGAGGCGC CCGCCGTCCA ATGGAATGCG 
AATCAATTGC AGATCGTGCT AGTTGAGATT TCGCATTTGC TGGCGGCCTT GGGCGAAGCG 
GCCGCTTCTA GAATAGACGA CGCCGTGATA AGGCTGGAAA TATGCCTGGA ACACATGGAT 
CAAGGGGTGC GGCACGAAGC AGCGATTGCC TGTGCCTCGT TAACGGCCAG CTTTCCAACG 
GAAGGTCGCA AGCTGGTACG GTCCTCGATC GATGAGATGC AACTCCATCA CGCGCAATTG 
GTCACGTTGG CTTCGAGCTC GTCGGATGCG AAGGAAGAAC CGGATGCCGG GATACGGATG 
TTTCGACGTC CCAAGGAGAA GGAGCATGAC CCATCCGCTC GTCATCAATG TGCGATTCAC 
GGCAGGGCCT TGATGATTTC CATCCTTGTG CGAGATCTTA CTAGTCTTCC AGGCGGGTTG 
CCGACGGAAT TATTAAGCGC CGCACTGTCC GTGGCGGAAA TAATGCTTTC GTGTCAATTC 
CATAAACCGA TCATCCAGGC CAATGCCATG TCGGCTTGCA ACTGCGTCAA GGCAGGCTTT 
GCTATTATCT CGGGCGTGCT GGCGAACGGT CCGAAAGCTG CGGCACCGAG TGTATCGCTA 
ATCTTCAATT CCTGGCAAAA AGCAATAAGC AGTATCACAG GCGGCGGCAA GATTCTCAGT 
CCGAGACACG AGCTGCTTTG CGTGGATGCA ATGCTCTCGT CGGTGGTTGT CTTTCTCAAG 
TATTGCTCCG AGCTTTTACT TTCAGTACCA GAGGCTTTGA CCCAGGTGAC GGTCCTTTTG 
GAAAACGTCC TGCCGATGCT TTTGCCGGAC GGAACGTTTG GAAGTCTTCC GTTTTCGGCA 
CCGGTTATGG CTCGACTAGA AAGTTCCAGG TCCTCCCTCC TTGAGGCGTT TGCGTGGTTG 
CCATCCGGTT CCTTCCCGAT GGTTGCCGAT ACAGTCTTTT CATTTGCCGC CGAACACATT 
CGAGCAGCCG TGGAGGGGGA GGTATCCTGC TCGATTTTAC ATGCGTTGGT GAGCCGGGAG 
GACTCTATTC TGGACGCCAA GACCATGAGT CGAGCGAGGC GAGACGGGCA AATTGGGGGA 
GCGCGTGATC TGGAAGAAAC AATCCTTTTG CTTACAGGCG AGATCGCACA CCCCGGGGAA 
AGAGAGGCCG TTCTGCATTT ATCCATGTAC AATCGATCGG AGCCAGACCC CAGCGTCTTT 
CGGGGTAGCC GCATTCTGGG AATTTGCGCA AAAGATGCTA GTGGGGAGAA ACCTCCGACG 
CCTCTACACG GGGTTGGAAC GTGGAGAAAA CCGATCGATC CGTCTTGCTC TTCCAAGGTC 
CGTCTTGTCG ATGCCGCTAT ACAGGCATTT TCCGCAACCT TTGGATTGAA GAGTGGTTCT 
GAACAACAGG GCGCAATGGA CATGTTGGAA TCTCTGGTAC CGCCATTACT TGCTCAGCTG 
GCTCGCGCAA TTGGTGTGAA CTCTGCCTTG GTCGATCAGA GCCCGAGGTC CAAGGCCAAG 
GAGGATTCTT CCGCCGTTGC CAACATTACT GCCGTTCTTC TGTCGTGTCT AAAAGCACTA 
CCACTCCACG AGACTAGCCA CAACGTTCCC CTTGGCCTGG GACCGCCGTG GATGAACAAA 
GCCAAAGATC TTCTTCTCAC TGTATTACCT TCCCCTTCCA GCACTGTTCG TCGTGCCGCA 
GCGGAAGGTC TCGCTCTACT CGCAACTTTG GGTGTTTCGG AAGACGCACA CTTTCTGCAA 
AGTAAGGTCC TTCATTCTCT GGATGAAGTG ATGCAAGGTA ACAAACCAGA TGGAAAACCC 
CGAGCGATTG CATTGGAACC AGTCTCAGCA GCGCGTGCGG GATCTCTACT TACCTTGGCT 
TGCATTCAGC GAACTGCGTT CAACGTTGCA AAGAAACAAA TTGCAAGAGC ACGATCTCGC 
GTGAATAATT CGAAGGACGT AGAATCAAGA CGGGCTAGTG AGCTGCCACT TCTACAAATG 
ATGACTCGGA TCCTCCCCTC TATCGCATGC TCGGGATTTC GCGATTTTTT TGTCGTGAGA 
ACGTACGCCC TGCACTCTTT TTCTGTTCTC TTGATATATT CTGAGCGTCT CGAGAAGACA 
ACTGATCTGG ACAAAGGGGA TAAACAGCTC TTGCGAAAGG CGGTGGAACT CGTCGAAGAT 
AATTTTGCTG CGTCCATGAC CATTTCTTCC ACAGAGATGG ACCGCGGCCA GGAAGCGGAA 
AAGATGACCT CGGAAGTCGC ATTTTTATCC GTACTATTGC GATTAATGTC GTTTCTGGTT 
CAGACAGTCT ACCATCTTCA AGATGAAGAC CCCGGCATTG GCGAGCGCTT CATACTGATT 
GCAAGGCTTA CTCTTGAGCT TTATGGATCG CATCCTGTTG TCTTTACTGA AGCGATGGCA 
TTCTTTGAAG TCACGGCTGG CCATCGCCAA CTTATTCCCT TACCATGGGA TAAAATCGAC 
TACAGCGAGA GTCCCTTGTT CGCAAGTATT TCGAGTATTC AATCCTCCTT GGCACCAATT 
CGTCCAGCTC TTTTTGCATT TGCACCTTGG GAGCAGCCTC GCAATTTGTC GGCCATTAAT 
ATACGTGCCT CGGGGATAGC TCTTCAGTCG CTGACCCAAT CAAATGTCTC TGTCGTAGAT 
TGGTGCAGCT TTTCGATCGT ATCCGCGTTG TTTGCTTCGC TGGAATCAAC ATCTGGGAAA 
GGGTTCTTTG GCAGAACTAC CTTTCTCCGA TCGCTGGCTG TGCCAAGACA TACGGAAGTT 
TCGTTTCATG AATGGAAAAA TGTAGAGCTC GATCTCACCG ATACCATTCG AACCATCTTC 
TATCTAAATA GTGCTAAAAC GGCTGTCTCG TCTTCAAATG TTCTGCGGTG GATCCTTTTC 
GCACGAGCTC TGTTGGTCAA ATCGTGTCCT TTAGACTACA CCGACAAGGA AGAGGAAGTT 
TCAATCGATT CTGTTGTCCA GGCTGCAAGC CGCAGATCGC ATCAGGACGT CTCGCTGGTC 
TATACTGCAT CCAGCGCTGT CCGATGGCAA GTCAAATGCA TTGCGGCACA AATTGTGGAA 
TTTGCCTTGG ATGCTCTTTT ACAAAACACG CCGGAAAATG CTGAAGTCGT ATATGGCGAC 
GCGAAGGACC AATGCGCGAA GGAACTCGAA AAAGCTAAAA AAAACGACAG CGGGCTTCCA 
GATTCAAGAC TTGTGTTCCA TCTCCAAGAA ATCTTATCTG CGGTGTGCAT GAGCACGGTA 
GCCGTGGTCG ACCAGGCGGA GGTGCATTCG TTGCAAGTCT CGGCAATGTA CGCTTTGACG 
ATGCTAATTT TAGCATTTGC AGAGTCGCCC GACCCGGAGC TTCCACAGTC TCGCATCTTG 
GATCAATATG CCCAGCAGAT TTTTTCTGCT GTCAAGCATG GTTTAGAATT GTCCACTTCG 
AGCCCCTCTA CCGCTTGTTT TCAGTTGTAT GTAGCCTCCT GTTACAGTAT GAGTGCACTG 
GTAGAGAGCG GAGTCACAAA AGATCCAATG GTGCTAAAGC GCTTGCTTCG TCCTATAGTT 
CCGAGGTCAG ACGAAACTCC TTTGTTTATG CATTCGGAAC CATATCCAGC TGAGCTCACG 
AAAATTTCGG AAGAAGGAGT TCACGAAAAT CGGCGTGTTC GACACTTGAA GAAGATCGCC 
CAAGTTTGGT GCACGAGCAA GCTTTTGATC GGAAATGAAC CCTTGTCAGA ATATATTTTA 
TTGGTTTCCA AGGATTTGAT CAAAGACCCG CTCCATATTG CTGTGCACAG TGCGGCATTT 
GCTTTCGATG GAGCCCGGTT GCTAATTTCG AGCCATTTTT CTTTGACCGG GGCTTGCCCT 
TGTTATAGAA CATCCGAAGC GGATGAGAAA ATGGCATGTG AACGAGGGTT TTTGTTCGAA 
TGCGCGGACG ACATCGATGA TTCAACCAAG ACCCTACTCA TGTCTCAGTG GTCGTATTGC 
GCTAGTACTG CAATCAAGCC TTTGGTCAGT TCGATGGACT CAGAGAATGG AAAGTTCAAG 
GTTCTATGCG ATGGGTGGAT AACGGTCTTG ACTCCGCTTT TACTCGAAGG CGTACATCAC 
GGCTTGTTGG CTTGCACTAG TGGGATTAAT CTCCCTTGTA TGGATGCAAC AAACGTGACT 
GTTGATTGCT TACGGGGTTT AAGCTGTTTG ACTGAAGCTG GACCGGAAGT TTTGTGCAAG 
ACACAGCACT TTAGCGACGT TGAGAGGCTG CTAAGAACGA TGCTGCAGAA GGTGTGGCTT 
CCTACTTTAC GCAATGAGAA ATTGACGGTC GACTCGAAAA TTGCGAAGGA AATGTGCCGT 
TTGGTCAGAA GTTTAGCAGA TTTGATGCCA TTCATTGCCA GTGATGAAAG TACTTTACTC 
GTCACTGTTC TGACTCCGCT GGAGCTTCTC GAACGTGCCA TGTTTGACTG CGAAATTTCT 
GCGGTCGCCG ACGAGATTGT TTCGACTTGC CTCGATGGTA TGACCAAATT CATTGCGCAC 
GGAAAAGTAA GCGAATCATT GCTGGAAGCG ATGTTGCATT TGTTGCTCCA AAGGATTCTA 
GTGTCAGAGA GGTCGCTTTC TGAACAGACC ACTGAGTCCT CCAAAGTTCT ACTGAAGCAA 
TGTTTCAGCA GCGGTATGGT GAATGCACGC CGCCGGAACA CCATCGCGGC TGATTTGGCG 
CACGTCGGTA ACTGGGATAC GTGGCTGGTC GTGTTTGCTT CGGACGACGG GTCGTCCTCG 
TGGAAGAGTC TAGACGCTGT TTCCGAATGC CTGCAAACCC CGGGTGGACC TCAAATGGCA 
TTGCTGGCCA AACTTTGTGC CTTTGCCCAA GGCTGCCCGA TTTCGAGTCC TTTGTTACAA 
CTATTGTTGC ATCGGGTTGG CGCCGACGTC GTCGGCACGT TGTATCTGTA CGGAACGCTG 
CAAATACCCG GCTCGGCGCG TCTCCACCGA CAAAAAGCGT GCGCCGACGC CTTGAAGCTG 
TCTCTAATTG GTTACCAGCA AGTGGTCGCC ACGAAGTCGG ACGACCGCAT CGCGCAGTAT 
CTCTCGTTGC TGTTCGAGAC TATCGTGGCC GTGTTGCGGT ACAACGGTGT CCCGAATCAT 
CCGTCGCCGC AACACGAGAG CGACCCAGCG TTGGGTCGCA TGTCGGCCCA GGCCATCTTA 
ATGACGGCAA GGACGACGCC GGTTGCCTTT AAAACGACAA CCGCCCTTTG CTTGAGTTTG 
CCGTCCGTGC CGAAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
Nature456(7219)239-44(2008 Nov)
Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV

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PHATRDRAFT_42497 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

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