CIITA cDNA ORF clone, Pan paniscus(pygmy chimpanzee)

Gene
Clones
gRNAs

Summary

Gene Symbol	CIITA
Entrez Gene ID	100973925
Full Name	class II major histocompatibility complex transactivator
Gene Type	protein-coding
Organism	Pan paniscus(pygmy chimpanzee)

mRNA and Protein(s)

mRNA	Protein	Name
XM_008960374.2	XP_008958622.1	MHC class II transactivator isoform X3
XM_008960373.2	XP_008958621.1	MHC class II transactivator isoform X1
XM_003808285.2	XP_003808333.1	MHC class II transactivator isoform X2

Pathways from BioSystems
Gene Ontology

The following CIITA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CIITA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OPa66904	XM_008960373.2 Latest version!	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPa66905	XM_003808285.2 Latest version!	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPa66906	XM_008960374.2 Latest version!	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CIITA ( XM_008960373.2 ) cDNA ORF clone, Pan paniscus(pygmy chimpanzee) -> XP_008958621.1 Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OPa66904
Clone ID Related Accession (Same CDS sequence)	XM_008960373.2
Accession Version	XM_008960373.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3396bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1525017600000
Organism	Pan paniscus(pygmy chimpanzee)
Product	MHC class II transactivator isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_027884.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 30, 2015 this sequence version replaced XM_008960373.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan paniscus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGTTGCC TGGCTCCACG CCCTGCTGGG TCCTACCTGT CAGAGCCCCA AGGCAGCTCA 
CAGTGTGCCA CCATGGAGTT GGGGCCCCTA GAAGGTGGCT ACCTGGAGCT TCTTAACAGC 
GATGCTGACC CCGTGTGCCT CTACCACTTC TATGACCAGA TGGACCTCGC TGGAGAAGAA 
GAGATTGAGC TCTACTCAGA ACCCGACACA GACACCATCA ACTGTGACCA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAGG CTTATGCCAA TATCGCGGAA 
CTGGACCAGT ATGTCTTCCA GGACTCCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATA 
GAGCACATAG GACCAGATGA AGTGATCGGT GAGAGTATGG AGATGCCAGC AGAAGTTGGG 
CAGAAAAGTC AGAAAAGACC CTTCCCAGAG GAGCTTCCGG CAGACCTGAA GCACTGGAAG 
CCAGCTGAAC CCCCCACTGT GGTGACTGGC AGTCTCCTAG TGGGACCAGT GAGCGACTGC 
TCCACCCTGC CCTGCCTGCC ACTGCCTGCG CTGTTCAACC AGGAGCCAGC CTCCGGCCAG 
ATGCGCCTGG AGAAAACCGA CCAGATTCCC ATGCCTTCCT CCAGTTCCTC GTTGAGCTGC 
CTGAATCTCC CTGAGGGACC CATCCAGTTT GTCCCCACCA TCTCCACTCT GCCCCATGGG 
CTCTGGCAAA TCTCTGAGGC TGGAACAGGG GTCTCCAGTA TATTCATCTA CCATGGTGAG 
GTGCCCCAGG CCAGCCAAGT ACCCCCTCCC AGTGGATTCA CTGTCCATGG CCTCCCAACA 
TCTCCAGACC GGCCAGGCTC CACCAGCCCC TTCGCTCCAT CAGCCACTGA CCTGCCCAGC 
ATGCCTGAAC CTGCCCTGAC TTCCCGAGCA AACATGACAG AGCACAAGAC GTCCCCCACC 
CAATGCCAGG CAGCTGGAGA GGTCTCCAAC AAGCTTCCAA AATGGCCTGA GCCGGTGGAG 
CAGTTCTACC GCTCACTGCA GGACACGTAT TGTGCCGAGC CCGCAGGCCC CGATGGCATC 
CTAGTGGAGG TGGATCTGGT GCAGGCCAGG CTGGAGAGGA GCAGCAGCAA GAGCCTGGAG 
CGGGAACTGG CCACCCCGGA CTGGGCAGAA CGGCAGCTGG CCCAAGGAGG CCTGGCTGAG 
GTGCTGTTGG CTGCCAAGGA GCACCGGCGG CCGCGTGAGA CACGAGTGAT TGCTGTGCTG 
GGCAAAGCTG GTCAGGGCAA GAGCTATTGG GCTGGGGCAG TGAGCCGGGC CTGGGCTTGT 
GGCCGGCTTC CCCAGTACGA CTTTGTCTTC TCTGTCCCCT GCCATTGCTT GAACCGTCCG 
GGGGATGCCT ATGGCCTGCA GGATCTGCTC TTCTCCCTGG GCCCACAGCC ACTCGTGGCG 
GCCGATGAGG TTTTCAGCCA CATCTTGAAG AGACCTGACC GCGTTCTGCT CATCCTAGAC 
GCCTTCGAGG AGCTGGAAGC GCAAGATGGC TTCCTGCACA GCACGTGCGG ACCGGCACCG 
GCGGAGCCCT GCTCCCTCCG GGGGCTGCTG GCCGGCCTTT TCCAGAAGAA GCTGCTCCGA 
GGTTGCACCC TCCTCCTCAC AGCCCGGCCC CGGGGCCGCC TGGTCCAGAG CCTGAGCAAG 
GCTGACGCCC TATTTGAGCT GTCCGGCTTC TCCATGGAGC AGGCCCAGGC CTACGTGATG 
CGCTACTTTG AGAGCTCAGG GATGACAGAG CACCAAGACA GAGCCCTGAC GCTCCTCCGG 
GACCGGCCAC TTCTTCTCAG TCACAGCCAC AGCCCTACTT TGTGCCGGGC AGTGTGCCAG 
CTCTCAGAGG CCCTGCTGGA GCTTGGGGAG GACGCCAAGC TTCCCTCCAC GCTCACGGGA 
CTCTATGTCG GCCTGCTGGG CCGTGCAGCC CTCGACAGCC CCCCCGGGGC CCTGGCAGAG 
CTGGCCAAGC TGGCCTGGGA GCTGGGCCGC AGACATCAAA GTACCCTACA GCAGGACCAG 
TTCCCATCCG CAGACGTGAG GACCTGGGCG ATGGCCAAAG GCTTAGTCCA ACACCCACCG 
GGGGCCGCAG AGTCCGAGCT GGCCTTCCCC AGCTTCCTCC TGCAATGCTT CCTGGGGGCC 
CTGTGGCTGG CTCTGAGTGG CGAAATCAAG GACAAGGAGC TCCCGCAGTA CCTAGCATTG 
ACCCCAAGGA AGAAGAGGCC CTATGACAAC TGGCTGGAGG GCGTGCCACG CTTTCTGGCT 
GGGCTGATCT TCCAGCCTCG CGCCCGCTGC CTGGGAGCCC TAGTCGGGCC ATCGGCGGCT 
GCCTTGGCGG ACAGGAAGCA GAAGGTGCTT GCGAGGTACC TGAAGCGGCT GCAGCCGGGG 
ACACTGCGGG CGCGGCAGCT GCTGGAGCTG CTGCACTGCG CCCACGAGGC CGAGGAGGCT 
GGAATTTGGC AGCACGTGGT ACAGGAGCTC CCCGGCCGCC TCTCTTTTCT GGGCACCCGT 
CTCACGCCTC CTGATGCACA TGTACTGGGC AAGGCCTTGG AGGCGGCGGG CCAAGACTTC 
TCCCTGGACC TCCGCAGCAC TGGCATTTGC CCCTCTGGAT TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCCTTG AGTGACACAG TGGCGCTGTG GGAGTCCCTG 
CGGCAGCATG GGGAGACCAA GCTACTTCAG GCAGCAGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAAGCCA AGTCCCTGAA GGATGTGGAA GACCTGGGAA AGCTTGTGCA GACTCAGAGG 
ACGAGAAGTT CCTCGGAAGA CACAGCTGGG GAGCTCCCTG CTGTTCGGGA CCTAAAGAAA 
CTGGAGTTTG CGCTGGGCCC TGTCTCAGGC CCCCAGGCTT TCCCCAAACT GGTGCGGATC 
CTCACGGCCT TTTCCTCCCT GCAGCATCTG GACCTGGATG CGCTGAGTGA GAACAAGATC 
GGGGACGAGG GTGTCTCGCA GCTCTCAGCC ACCTTCCCCC AGCTGAAGTC CTTGGAAACC 
CTCAATCTGT CCCAGAACAA CATCACTGAC CTGGGTGCCT ACAAACTCGC CAAGGCCCTG 
CCTTCACTCG CTGCATCCCT GCTCAGGCTA AGCTTGTACA ATAACTGCAT CTGCGACGTG 
GGAGCCGAGA GCTTGGCTCG TGTGCTTCCA GACATGGTGT CCCTCCGGGT GATGGACGTC 
CAGTACAACA AGTTCACGGC TGCCGGAGCC CAGCAGCTCG CTGCCAGCCT TCGGAGGTGT 
CCTCATGTGG AGACGCTGGC GATGTGGACG CCCACCATCC CATTCAGTGT CCAGGAACAC 
CTGCAACAAC AGGATTCACG GATCAGCCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008958621.1
CDS	134..3529
Translation	MRCLAPRPAGSYLSEPQGSSQCATMELGPLEGGYLELLNSDADPVCLYHFYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPTVVTGSLLVGPVSDCSTLPCLPLPALFNQEPASGQMRLEKTDQIPMPSSSSSLSCLNLPEGPIQFVPTISTLPHGLWQISEAGTGVSSIFIYHGEVPQASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRSLQDTYCAEPAGPDGILVEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRDRPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGLLGRAALDSPPGALAELAKLAWELGRRHQSTLQQDQFPSADVRTWAMAKGLVQHPPGAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSAAALADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPGRLSFLGTRLTPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLRQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAKALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR

Target ORF information:

RefSeq Version	XM_008960373.2
Organism	Pan paniscus(pygmy chimpanzee)
Definition	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008960373.2

ORF Insert Sequence:

ATGCGTTGCC TGGCTCCACG CCCTGCTGGG TCCTACCTGT CAGAGCCCCA AGGCAGCTCA 
CAGTGTGCCA CCATGGAGTT GGGGCCCCTA GAAGGTGGCT ACCTGGAGCT TCTTAACAGC 
GATGCTGACC CCGTGTGCCT CTACCACTTC TATGACCAGA TGGACCTCGC TGGAGAAGAA 
GAGATTGAGC TCTACTCAGA ACCCGACACA GACACCATCA ACTGTGACCA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAGG CTTATGCCAA TATCGCGGAA 
CTGGACCAGT ATGTCTTCCA GGACTCCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCATA 
GAGCACATAG GACCAGATGA AGTGATCGGT GAGAGTATGG AGATGCCAGC AGAAGTTGGG 
CAGAAAAGTC AGAAAAGACC CTTCCCAGAG GAGCTTCCGG CAGACCTGAA GCACTGGAAG 
CCAGCTGAAC CCCCCACTGT GGTGACTGGC AGTCTCCTAG TGGGACCAGT GAGCGACTGC 
TCCACCCTGC CCTGCCTGCC ACTGCCTGCG CTGTTCAACC AGGAGCCAGC CTCCGGCCAG 
ATGCGCCTGG AGAAAACCGA CCAGATTCCC ATGCCTTCCT CCAGTTCCTC GTTGAGCTGC 
CTGAATCTCC CTGAGGGACC CATCCAGTTT GTCCCCACCA TCTCCACTCT GCCCCATGGG 
CTCTGGCAAA TCTCTGAGGC TGGAACAGGG GTCTCCAGTA TATTCATCTA CCATGGTGAG 
GTGCCCCAGG CCAGCCAAGT ACCCCCTCCC AGTGGATTCA CTGTCCATGG CCTCCCAACA 
TCTCCAGACC GGCCAGGCTC CACCAGCCCC TTCGCTCCAT CAGCCACTGA CCTGCCCAGC 
ATGCCTGAAC CTGCCCTGAC TTCCCGAGCA AACATGACAG AGCACAAGAC GTCCCCCACC 
CAATGCCAGG CAGCTGGAGA GGTCTCCAAC AAGCTTCCAA AATGGCCTGA GCCGGTGGAG 
CAGTTCTACC GCTCACTGCA GGACACGTAT TGTGCCGAGC CCGCAGGCCC CGATGGCATC 
CTAGTGGAGG TGGATCTGGT GCAGGCCAGG CTGGAGAGGA GCAGCAGCAA GAGCCTGGAG 
CGGGAACTGG CCACCCCGGA CTGGGCAGAA CGGCAGCTGG CCCAAGGAGG CCTGGCTGAG 
GTGCTGTTGG CTGCCAAGGA GCACCGGCGG CCGCGTGAGA CACGAGTGAT TGCTGTGCTG 
GGCAAAGCTG GTCAGGGCAA GAGCTATTGG GCTGGGGCAG TGAGCCGGGC CTGGGCTTGT 
GGCCGGCTTC CCCAGTACGA CTTTGTCTTC TCTGTCCCCT GCCATTGCTT GAACCGTCCG 
GGGGATGCCT ATGGCCTGCA GGATCTGCTC TTCTCCCTGG GCCCACAGCC ACTCGTGGCG 
GCCGATGAGG TTTTCAGCCA CATCTTGAAG AGACCTGACC GCGTTCTGCT CATCCTAGAC 
GCCTTCGAGG AGCTGGAAGC GCAAGATGGC TTCCTGCACA GCACGTGCGG ACCGGCACCG 
GCGGAGCCCT GCTCCCTCCG GGGGCTGCTG GCCGGCCTTT TCCAGAAGAA GCTGCTCCGA 
GGTTGCACCC TCCTCCTCAC AGCCCGGCCC CGGGGCCGCC TGGTCCAGAG CCTGAGCAAG 
GCTGACGCCC TATTTGAGCT GTCCGGCTTC TCCATGGAGC AGGCCCAGGC CTACGTGATG 
CGCTACTTTG AGAGCTCAGG GATGACAGAG CACCAAGACA GAGCCCTGAC GCTCCTCCGG 
GACCGGCCAC TTCTTCTCAG TCACAGCCAC AGCCCTACTT TGTGCCGGGC AGTGTGCCAG 
CTCTCAGAGG CCCTGCTGGA GCTTGGGGAG GACGCCAAGC TTCCCTCCAC GCTCACGGGA 
CTCTATGTCG GCCTGCTGGG CCGTGCAGCC CTCGACAGCC CCCCCGGGGC CCTGGCAGAG 
CTGGCCAAGC TGGCCTGGGA GCTGGGCCGC AGACATCAAA GTACCCTACA GCAGGACCAG 
TTCCCATCCG CAGACGTGAG GACCTGGGCG ATGGCCAAAG GCTTAGTCCA ACACCCACCG 
GGGGCCGCAG AGTCCGAGCT GGCCTTCCCC AGCTTCCTCC TGCAATGCTT CCTGGGGGCC 
CTGTGGCTGG CTCTGAGTGG CGAAATCAAG GACAAGGAGC TCCCGCAGTA CCTAGCATTG 
ACCCCAAGGA AGAAGAGGCC CTATGACAAC TGGCTGGAGG GCGTGCCACG CTTTCTGGCT 
GGGCTGATCT TCCAGCCTCG CGCCCGCTGC CTGGGAGCCC TAGTCGGGCC ATCGGCGGCT 
GCCTTGGCGG ACAGGAAGCA GAAGGTGCTT GCGAGGTACC TGAAGCGGCT GCAGCCGGGG 
ACACTGCGGG CGCGGCAGCT GCTGGAGCTG CTGCACTGCG CCCACGAGGC CGAGGAGGCT 
GGAATTTGGC AGCACGTGGT ACAGGAGCTC CCCGGCCGCC TCTCTTTTCT GGGCACCCGT 
CTCACGCCTC CTGATGCACA TGTACTGGGC AAGGCCTTGG AGGCGGCGGG CCAAGACTTC 
TCCCTGGACC TCCGCAGCAC TGGCATTTGC CCCTCTGGAT TGGGGAGCCT CGTGGGACTC 
AGCTGTGTCA CCCGTTTCAG GGCTGCCTTG AGTGACACAG TGGCGCTGTG GGAGTCCCTG 
CGGCAGCATG GGGAGACCAA GCTACTTCAG GCAGCAGAGG AGAAGTTCAC CATCGAGCCT 
TTCAAAGCCA AGTCCCTGAA GGATGTGGAA GACCTGGGAA AGCTTGTGCA GACTCAGAGG 
ACGAGAAGTT CCTCGGAAGA CACAGCTGGG GAGCTCCCTG CTGTTCGGGA CCTAAAGAAA 
CTGGAGTTTG CGCTGGGCCC TGTCTCAGGC CCCCAGGCTT TCCCCAAACT GGTGCGGATC 
CTCACGGCCT TTTCCTCCCT GCAGCATCTG GACCTGGATG CGCTGAGTGA GAACAAGATC 
GGGGACGAGG GTGTCTCGCA GCTCTCAGCC ACCTTCCCCC AGCTGAAGTC CTTGGAAACC 
CTCAATCTGT CCCAGAACAA CATCACTGAC CTGGGTGCCT ACAAACTCGC CAAGGCCCTG 
CCTTCACTCG CTGCATCCCT GCTCAGGCTA AGCTTGTACA ATAACTGCAT CTGCGACGTG 
GGAGCCGAGA GCTTGGCTCG TGTGCTTCCA GACATGGTGT CCCTCCGGGT GATGGACGTC 
CAGTACAACA AGTTCACGGC TGCCGGAGCC CAGCAGCTCG CTGCCAGCCT TCGGAGGTGT 
CCTCATGTGG AGACGCTGGC GATGTGGACG CCCACCATCC CATTCAGTGT CCAGGAACAC 
CTGCAACAAC AGGATTCACG GATCAGCCTG AGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_003808285.2 ) cDNA ORF clone, Pan paniscus(pygmy chimpanzee) -> XP_003808333.1 Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.

Price & Availability↑

CloneID	OPa66905
Clone ID Related Accession (Same CDS sequence)	XM_003808285.2
Accession Version	XM_003808285.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3393bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1525017600000
Organism	Pan paniscus(pygmy chimpanzee)
Product	MHC class II transactivator isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_027884.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2014 this sequence version replaced XM_003808285.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan paniscus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGTTGCC TGGCTCCACG CCCTGCTGGG TCCTACCTGT CAGAGCCCCA AGGCAGCTCA 
CAGTGTGCCA CCATGGAGTT GGGGCCCCTA GAAGGTGGCT ACCTGGAGCT TCTTAACAGC 
GATGCTGACC CCGTGTGCCT CTACCACTTC TATGACCAGA TGGACCTCGC TGGAGAAGAA 
GAGATTGAGC TCTACTCAGA ACCCGACACA GACACCATCA ACTGTGACCA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAGG CTTATGCCAA TATCGCGGAA 
CTGGACCAGT ATGTCTTCCA GGACTCCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCAAG 
CACATAGGAC CAGATGAAGT GATCGGTGAG AGTATGGAGA TGCCAGCAGA AGTTGGGCAG 
AAAAGTCAGA AAAGACCCTT CCCAGAGGAG CTTCCGGCAG ACCTGAAGCA CTGGAAGCCA 
GCTGAACCCC CCACTGTGGT GACTGGCAGT CTCCTAGTGG GACCAGTGAG CGACTGCTCC 
ACCCTGCCCT GCCTGCCACT GCCTGCGCTG TTCAACCAGG AGCCAGCCTC CGGCCAGATG 
CGCCTGGAGA AAACCGACCA GATTCCCATG CCTTCCTCCA GTTCCTCGTT GAGCTGCCTG 
AATCTCCCTG AGGGACCCAT CCAGTTTGTC CCCACCATCT CCACTCTGCC CCATGGGCTC 
TGGCAAATCT CTGAGGCTGG AACAGGGGTC TCCAGTATAT TCATCTACCA TGGTGAGGTG 
CCCCAGGCCA GCCAAGTACC CCCTCCCAGT GGATTCACTG TCCATGGCCT CCCAACATCT 
CCAGACCGGC CAGGCTCCAC CAGCCCCTTC GCTCCATCAG CCACTGACCT GCCCAGCATG 
CCTGAACCTG CCCTGACTTC CCGAGCAAAC ATGACAGAGC ACAAGACGTC CCCCACCCAA 
TGCCAGGCAG CTGGAGAGGT CTCCAACAAG CTTCCAAAAT GGCCTGAGCC GGTGGAGCAG 
TTCTACCGCT CACTGCAGGA CACGTATTGT GCCGAGCCCG CAGGCCCCGA TGGCATCCTA 
GTGGAGGTGG ATCTGGTGCA GGCCAGGCTG GAGAGGAGCA GCAGCAAGAG CCTGGAGCGG 
GAACTGGCCA CCCCGGACTG GGCAGAACGG CAGCTGGCCC AAGGAGGCCT GGCTGAGGTG 
CTGTTGGCTG CCAAGGAGCA CCGGCGGCCG CGTGAGACAC GAGTGATTGC TGTGCTGGGC 
AAAGCTGGTC AGGGCAAGAG CTATTGGGCT GGGGCAGTGA GCCGGGCCTG GGCTTGTGGC 
CGGCTTCCCC AGTACGACTT TGTCTTCTCT GTCCCCTGCC ATTGCTTGAA CCGTCCGGGG 
GATGCCTATG GCCTGCAGGA TCTGCTCTTC TCCCTGGGCC CACAGCCACT CGTGGCGGCC 
GATGAGGTTT TCAGCCACAT CTTGAAGAGA CCTGACCGCG TTCTGCTCAT CCTAGACGCC 
TTCGAGGAGC TGGAAGCGCA AGATGGCTTC CTGCACAGCA CGTGCGGACC GGCACCGGCG 
GAGCCCTGCT CCCTCCGGGG GCTGCTGGCC GGCCTTTTCC AGAAGAAGCT GCTCCGAGGT 
TGCACCCTCC TCCTCACAGC CCGGCCCCGG GGCCGCCTGG TCCAGAGCCT GAGCAAGGCT 
GACGCCCTAT TTGAGCTGTC CGGCTTCTCC ATGGAGCAGG CCCAGGCCTA CGTGATGCGC 
TACTTTGAGA GCTCAGGGAT GACAGAGCAC CAAGACAGAG CCCTGACGCT CCTCCGGGAC 
CGGCCACTTC TTCTCAGTCA CAGCCACAGC CCTACTTTGT GCCGGGCAGT GTGCCAGCTC 
TCAGAGGCCC TGCTGGAGCT TGGGGAGGAC GCCAAGCTTC CCTCCACGCT CACGGGACTC 
TATGTCGGCC TGCTGGGCCG TGCAGCCCTC GACAGCCCCC CCGGGGCCCT GGCAGAGCTG 
GCCAAGCTGG CCTGGGAGCT GGGCCGCAGA CATCAAAGTA CCCTACAGCA GGACCAGTTC 
CCATCCGCAG ACGTGAGGAC CTGGGCGATG GCCAAAGGCT TAGTCCAACA CCCACCGGGG 
GCCGCAGAGT CCGAGCTGGC CTTCCCCAGC TTCCTCCTGC AATGCTTCCT GGGGGCCCTG 
TGGCTGGCTC TGAGTGGCGA AATCAAGGAC AAGGAGCTCC CGCAGTACCT AGCATTGACC 
CCAAGGAAGA AGAGGCCCTA TGACAACTGG CTGGAGGGCG TGCCACGCTT TCTGGCTGGG 
CTGATCTTCC AGCCTCGCGC CCGCTGCCTG GGAGCCCTAG TCGGGCCATC GGCGGCTGCC 
TTGGCGGACA GGAAGCAGAA GGTGCTTGCG AGGTACCTGA AGCGGCTGCA GCCGGGGACA 
CTGCGGGCGC GGCAGCTGCT GGAGCTGCTG CACTGCGCCC ACGAGGCCGA GGAGGCTGGA 
ATTTGGCAGC ACGTGGTACA GGAGCTCCCC GGCCGCCTCT CTTTTCTGGG CACCCGTCTC 
ACGCCTCCTG ATGCACATGT ACTGGGCAAG GCCTTGGAGG CGGCGGGCCA AGACTTCTCC 
CTGGACCTCC GCAGCACTGG CATTTGCCCC TCTGGATTGG GGAGCCTCGT GGGACTCAGC 
TGTGTCACCC GTTTCAGGGC TGCCTTGAGT GACACAGTGG CGCTGTGGGA GTCCCTGCGG 
CAGCATGGGG AGACCAAGCT ACTTCAGGCA GCAGAGGAGA AGTTCACCAT CGAGCCTTTC 
AAAGCCAAGT CCCTGAAGGA TGTGGAAGAC CTGGGAAAGC TTGTGCAGAC TCAGAGGACG 
AGAAGTTCCT CGGAAGACAC AGCTGGGGAG CTCCCTGCTG TTCGGGACCT AAAGAAACTG 
GAGTTTGCGC TGGGCCCTGT CTCAGGCCCC CAGGCTTTCC CCAAACTGGT GCGGATCCTC 
ACGGCCTTTT CCTCCCTGCA GCATCTGGAC CTGGATGCGC TGAGTGAGAA CAAGATCGGG 
GACGAGGGTG TCTCGCAGCT CTCAGCCACC TTCCCCCAGC TGAAGTCCTT GGAAACCCTC 
AATCTGTCCC AGAACAACAT CACTGACCTG GGTGCCTACA AACTCGCCAA GGCCCTGCCT 
TCACTCGCTG CATCCCTGCT CAGGCTAAGC TTGTACAATA ACTGCATCTG CGACGTGGGA 
GCCGAGAGCT TGGCTCGTGT GCTTCCAGAC ATGGTGTCCC TCCGGGTGAT GGACGTCCAG 
TACAACAAGT TCACGGCTGC CGGAGCCCAG CAGCTCGCTG CCAGCCTTCG GAGGTGTCCT 
CATGTGGAGA CGCTGGCGAT GTGGACGCCC ACCATCCCAT TCAGTGTCCA GGAACACCTG 
CAACAACAGG ATTCACGGAT CAGCCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003808333.1
CDS	134..3526
Translation	MRCLAPRPAGSYLSEPQGSSQCATMELGPLEGGYLELLNSDADPVCLYHFYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFKHIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPTVVTGSLLVGPVSDCSTLPCLPLPALFNQEPASGQMRLEKTDQIPMPSSSSSLSCLNLPEGPIQFVPTISTLPHGLWQISEAGTGVSSIFIYHGEVPQASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRSLQDTYCAEPAGPDGILVEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRDRPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGLLGRAALDSPPGALAELAKLAWELGRRHQSTLQQDQFPSADVRTWAMAKGLVQHPPGAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSAAALADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPGRLSFLGTRLTPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLRQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAKALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR

Target ORF information:

RefSeq Version	XM_003808285.2
Organism	Pan paniscus(pygmy chimpanzee)
Definition	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003808285.2

ORF Insert Sequence:

ATGCGTTGCC TGGCTCCACG CCCTGCTGGG TCCTACCTGT CAGAGCCCCA AGGCAGCTCA 
CAGTGTGCCA CCATGGAGTT GGGGCCCCTA GAAGGTGGCT ACCTGGAGCT TCTTAACAGC 
GATGCTGACC CCGTGTGCCT CTACCACTTC TATGACCAGA TGGACCTCGC TGGAGAAGAA 
GAGATTGAGC TCTACTCAGA ACCCGACACA GACACCATCA ACTGTGACCA GTTCAGCAGG 
CTGTTGTGTG ACATGGAAGG TGATGAAGAG ACCAGGGAGG CTTATGCCAA TATCGCGGAA 
CTGGACCAGT ATGTCTTCCA GGACTCCCAG CTGGAGGGCC TGAGCAAAGA CATTTTCAAG 
CACATAGGAC CAGATGAAGT GATCGGTGAG AGTATGGAGA TGCCAGCAGA AGTTGGGCAG 
AAAAGTCAGA AAAGACCCTT CCCAGAGGAG CTTCCGGCAG ACCTGAAGCA CTGGAAGCCA 
GCTGAACCCC CCACTGTGGT GACTGGCAGT CTCCTAGTGG GACCAGTGAG CGACTGCTCC 
ACCCTGCCCT GCCTGCCACT GCCTGCGCTG TTCAACCAGG AGCCAGCCTC CGGCCAGATG 
CGCCTGGAGA AAACCGACCA GATTCCCATG CCTTCCTCCA GTTCCTCGTT GAGCTGCCTG 
AATCTCCCTG AGGGACCCAT CCAGTTTGTC CCCACCATCT CCACTCTGCC CCATGGGCTC 
TGGCAAATCT CTGAGGCTGG AACAGGGGTC TCCAGTATAT TCATCTACCA TGGTGAGGTG 
CCCCAGGCCA GCCAAGTACC CCCTCCCAGT GGATTCACTG TCCATGGCCT CCCAACATCT 
CCAGACCGGC CAGGCTCCAC CAGCCCCTTC GCTCCATCAG CCACTGACCT GCCCAGCATG 
CCTGAACCTG CCCTGACTTC CCGAGCAAAC ATGACAGAGC ACAAGACGTC CCCCACCCAA 
TGCCAGGCAG CTGGAGAGGT CTCCAACAAG CTTCCAAAAT GGCCTGAGCC GGTGGAGCAG 
TTCTACCGCT CACTGCAGGA CACGTATTGT GCCGAGCCCG CAGGCCCCGA TGGCATCCTA 
GTGGAGGTGG ATCTGGTGCA GGCCAGGCTG GAGAGGAGCA GCAGCAAGAG CCTGGAGCGG 
GAACTGGCCA CCCCGGACTG GGCAGAACGG CAGCTGGCCC AAGGAGGCCT GGCTGAGGTG 
CTGTTGGCTG CCAAGGAGCA CCGGCGGCCG CGTGAGACAC GAGTGATTGC TGTGCTGGGC 
AAAGCTGGTC AGGGCAAGAG CTATTGGGCT GGGGCAGTGA GCCGGGCCTG GGCTTGTGGC 
CGGCTTCCCC AGTACGACTT TGTCTTCTCT GTCCCCTGCC ATTGCTTGAA CCGTCCGGGG 
GATGCCTATG GCCTGCAGGA TCTGCTCTTC TCCCTGGGCC CACAGCCACT CGTGGCGGCC 
GATGAGGTTT TCAGCCACAT CTTGAAGAGA CCTGACCGCG TTCTGCTCAT CCTAGACGCC 
TTCGAGGAGC TGGAAGCGCA AGATGGCTTC CTGCACAGCA CGTGCGGACC GGCACCGGCG 
GAGCCCTGCT CCCTCCGGGG GCTGCTGGCC GGCCTTTTCC AGAAGAAGCT GCTCCGAGGT 
TGCACCCTCC TCCTCACAGC CCGGCCCCGG GGCCGCCTGG TCCAGAGCCT GAGCAAGGCT 
GACGCCCTAT TTGAGCTGTC CGGCTTCTCC ATGGAGCAGG CCCAGGCCTA CGTGATGCGC 
TACTTTGAGA GCTCAGGGAT GACAGAGCAC CAAGACAGAG CCCTGACGCT CCTCCGGGAC 
CGGCCACTTC TTCTCAGTCA CAGCCACAGC CCTACTTTGT GCCGGGCAGT GTGCCAGCTC 
TCAGAGGCCC TGCTGGAGCT TGGGGAGGAC GCCAAGCTTC CCTCCACGCT CACGGGACTC 
TATGTCGGCC TGCTGGGCCG TGCAGCCCTC GACAGCCCCC CCGGGGCCCT GGCAGAGCTG 
GCCAAGCTGG CCTGGGAGCT GGGCCGCAGA CATCAAAGTA CCCTACAGCA GGACCAGTTC 
CCATCCGCAG ACGTGAGGAC CTGGGCGATG GCCAAAGGCT TAGTCCAACA CCCACCGGGG 
GCCGCAGAGT CCGAGCTGGC CTTCCCCAGC TTCCTCCTGC AATGCTTCCT GGGGGCCCTG 
TGGCTGGCTC TGAGTGGCGA AATCAAGGAC AAGGAGCTCC CGCAGTACCT AGCATTGACC 
CCAAGGAAGA AGAGGCCCTA TGACAACTGG CTGGAGGGCG TGCCACGCTT TCTGGCTGGG 
CTGATCTTCC AGCCTCGCGC CCGCTGCCTG GGAGCCCTAG TCGGGCCATC GGCGGCTGCC 
TTGGCGGACA GGAAGCAGAA GGTGCTTGCG AGGTACCTGA AGCGGCTGCA GCCGGGGACA 
CTGCGGGCGC GGCAGCTGCT GGAGCTGCTG CACTGCGCCC ACGAGGCCGA GGAGGCTGGA 
ATTTGGCAGC ACGTGGTACA GGAGCTCCCC GGCCGCCTCT CTTTTCTGGG CACCCGTCTC 
ACGCCTCCTG ATGCACATGT ACTGGGCAAG GCCTTGGAGG CGGCGGGCCA AGACTTCTCC 
CTGGACCTCC GCAGCACTGG CATTTGCCCC TCTGGATTGG GGAGCCTCGT GGGACTCAGC 
TGTGTCACCC GTTTCAGGGC TGCCTTGAGT GACACAGTGG CGCTGTGGGA GTCCCTGCGG 
CAGCATGGGG AGACCAAGCT ACTTCAGGCA GCAGAGGAGA AGTTCACCAT CGAGCCTTTC 
AAAGCCAAGT CCCTGAAGGA TGTGGAAGAC CTGGGAAAGC TTGTGCAGAC TCAGAGGACG 
AGAAGTTCCT CGGAAGACAC AGCTGGGGAG CTCCCTGCTG TTCGGGACCT AAAGAAACTG 
GAGTTTGCGC TGGGCCCTGT CTCAGGCCCC CAGGCTTTCC CCAAACTGGT GCGGATCCTC 
ACGGCCTTTT CCTCCCTGCA GCATCTGGAC CTGGATGCGC TGAGTGAGAA CAAGATCGGG 
GACGAGGGTG TCTCGCAGCT CTCAGCCACC TTCCCCCAGC TGAAGTCCTT GGAAACCCTC 
AATCTGTCCC AGAACAACAT CACTGACCTG GGTGCCTACA AACTCGCCAA GGCCCTGCCT 
TCACTCGCTG CATCCCTGCT CAGGCTAAGC TTGTACAATA ACTGCATCTG CGACGTGGGA 
GCCGAGAGCT TGGCTCGTGT GCTTCCAGAC ATGGTGTCCC TCCGGGTGAT GGACGTCCAG 
TACAACAAGT TCACGGCTGC CGGAGCCCAG CAGCTCGCTG CCAGCCTTCG GAGGTGTCCT 
CATGTGGAGA CGCTGGCGAT GTGGACGCCC ACCATCCCAT TCAGTGTCCA GGAACACCTG 
CAACAACAGG ATTCACGGAT CAGCCTGAGA TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

CIITA ( XM_008960374.2 ) cDNA ORF clone, Pan paniscus(pygmy chimpanzee) -> XP_008958622.1 Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.

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CloneID	OPa66906
Clone ID Related Accession (Same CDS sequence)	XM_008960374.2
Accession Version	XM_008960374.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3324bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1525017600000
Organism	Pan paniscus(pygmy chimpanzee)
Product	MHC class II transactivator isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_027884.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 30, 2015 this sequence version replaced XM_008960374.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan paniscus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGTTGG GGCCCCTAGA AGGTGGCTAC CTGGAGCTTC TTAACAGCGA TGCTGACCCC 
GTGTGCCTCT ACCACTTCTA TGACCAGATG GACCTCGCTG GAGAAGAAGA GATTGAGCTC 
TACTCAGAAC CCGACACAGA CACCATCAAC TGTGACCAGT TCAGCAGGCT GTTGTGTGAC 
ATGGAAGGTG ATGAAGAGAC CAGGGAGGCT TATGCCAATA TCGCGGAACT GGACCAGTAT 
GTCTTCCAGG ACTCCCAGCT GGAGGGCCTG AGCAAAGACA TTTTCATAGA GCACATAGGA 
CCAGATGAAG TGATCGGTGA GAGTATGGAG ATGCCAGCAG AAGTTGGGCA GAAAAGTCAG 
AAAAGACCCT TCCCAGAGGA GCTTCCGGCA GACCTGAAGC ACTGGAAGCC AGCTGAACCC 
CCCACTGTGG TGACTGGCAG TCTCCTAGTG GGACCAGTGA GCGACTGCTC CACCCTGCCC 
TGCCTGCCAC TGCCTGCGCT GTTCAACCAG GAGCCAGCCT CCGGCCAGAT GCGCCTGGAG 
AAAACCGACC AGATTCCCAT GCCTTCCTCC AGTTCCTCGT TGAGCTGCCT GAATCTCCCT 
GAGGGACCCA TCCAGTTTGT CCCCACCATC TCCACTCTGC CCCATGGGCT CTGGCAAATC 
TCTGAGGCTG GAACAGGGGT CTCCAGTATA TTCATCTACC ATGGTGAGGT GCCCCAGGCC 
AGCCAAGTAC CCCCTCCCAG TGGATTCACT GTCCATGGCC TCCCAACATC TCCAGACCGG 
CCAGGCTCCA CCAGCCCCTT CGCTCCATCA GCCACTGACC TGCCCAGCAT GCCTGAACCT 
GCCCTGACTT CCCGAGCAAA CATGACAGAG CACAAGACGT CCCCCACCCA ATGCCAGGCA 
GCTGGAGAGG TCTCCAACAA GCTTCCAAAA TGGCCTGAGC CGGTGGAGCA GTTCTACCGC 
TCACTGCAGG ACACGTATTG TGCCGAGCCC GCAGGCCCCG ATGGCATCCT AGTGGAGGTG 
GATCTGGTGC AGGCCAGGCT GGAGAGGAGC AGCAGCAAGA GCCTGGAGCG GGAACTGGCC 
ACCCCGGACT GGGCAGAACG GCAGCTGGCC CAAGGAGGCC TGGCTGAGGT GCTGTTGGCT 
GCCAAGGAGC ACCGGCGGCC GCGTGAGACA CGAGTGATTG CTGTGCTGGG CAAAGCTGGT 
CAGGGCAAGA GCTATTGGGC TGGGGCAGTG AGCCGGGCCT GGGCTTGTGG CCGGCTTCCC 
CAGTACGACT TTGTCTTCTC TGTCCCCTGC CATTGCTTGA ACCGTCCGGG GGATGCCTAT 
GGCCTGCAGG ATCTGCTCTT CTCCCTGGGC CCACAGCCAC TCGTGGCGGC CGATGAGGTT 
TTCAGCCACA TCTTGAAGAG ACCTGACCGC GTTCTGCTCA TCCTAGACGC CTTCGAGGAG 
CTGGAAGCGC AAGATGGCTT CCTGCACAGC ACGTGCGGAC CGGCACCGGC GGAGCCCTGC 
TCCCTCCGGG GGCTGCTGGC CGGCCTTTTC CAGAAGAAGC TGCTCCGAGG TTGCACCCTC 
CTCCTCACAG CCCGGCCCCG GGGCCGCCTG GTCCAGAGCC TGAGCAAGGC TGACGCCCTA 
TTTGAGCTGT CCGGCTTCTC CATGGAGCAG GCCCAGGCCT ACGTGATGCG CTACTTTGAG 
AGCTCAGGGA TGACAGAGCA CCAAGACAGA GCCCTGACGC TCCTCCGGGA CCGGCCACTT 
CTTCTCAGTC ACAGCCACAG CCCTACTTTG TGCCGGGCAG TGTGCCAGCT CTCAGAGGCC 
CTGCTGGAGC TTGGGGAGGA CGCCAAGCTT CCCTCCACGC TCACGGGACT CTATGTCGGC 
CTGCTGGGCC GTGCAGCCCT CGACAGCCCC CCCGGGGCCC TGGCAGAGCT GGCCAAGCTG 
GCCTGGGAGC TGGGCCGCAG ACATCAAAGT ACCCTACAGC AGGACCAGTT CCCATCCGCA 
GACGTGAGGA CCTGGGCGAT GGCCAAAGGC TTAGTCCAAC ACCCACCGGG GGCCGCAGAG 
TCCGAGCTGG CCTTCCCCAG CTTCCTCCTG CAATGCTTCC TGGGGGCCCT GTGGCTGGCT 
CTGAGTGGCG AAATCAAGGA CAAGGAGCTC CCGCAGTACC TAGCATTGAC CCCAAGGAAG 
AAGAGGCCCT ATGACAACTG GCTGGAGGGC GTGCCACGCT TTCTGGCTGG GCTGATCTTC 
CAGCCTCGCG CCCGCTGCCT GGGAGCCCTA GTCGGGCCAT CGGCGGCTGC CTTGGCGGAC 
AGGAAGCAGA AGGTGCTTGC GAGGTACCTG AAGCGGCTGC AGCCGGGGAC ACTGCGGGCG 
CGGCAGCTGC TGGAGCTGCT GCACTGCGCC CACGAGGCCG AGGAGGCTGG AATTTGGCAG 
CACGTGGTAC AGGAGCTCCC CGGCCGCCTC TCTTTTCTGG GCACCCGTCT CACGCCTCCT 
GATGCACATG TACTGGGCAA GGCCTTGGAG GCGGCGGGCC AAGACTTCTC CCTGGACCTC 
CGCAGCACTG GCATTTGCCC CTCTGGATTG GGGAGCCTCG TGGGACTCAG CTGTGTCACC 
CGTTTCAGGG CTGCCTTGAG TGACACAGTG GCGCTGTGGG AGTCCCTGCG GCAGCATGGG 
GAGACCAAGC TACTTCAGGC AGCAGAGGAG AAGTTCACCA TCGAGCCTTT CAAAGCCAAG 
TCCCTGAAGG ATGTGGAAGA CCTGGGAAAG CTTGTGCAGA CTCAGAGGAC GAGAAGTTCC 
TCGGAAGACA CAGCTGGGGA GCTCCCTGCT GTTCGGGACC TAAAGAAACT GGAGTTTGCG 
CTGGGCCCTG TCTCAGGCCC CCAGGCTTTC CCCAAACTGG TGCGGATCCT CACGGCCTTT 
TCCTCCCTGC AGCATCTGGA CCTGGATGCG CTGAGTGAGA ACAAGATCGG GGACGAGGGT 
GTCTCGCAGC TCTCAGCCAC CTTCCCCCAG CTGAAGTCCT TGGAAACCCT CAATCTGTCC 
CAGAACAACA TCACTGACCT GGGTGCCTAC AAACTCGCCA AGGCCCTGCC TTCACTCGCT 
GCATCCCTGC TCAGGCTAAG CTTGTACAAT AACTGCATCT GCGACGTGGG AGCCGAGAGC 
TTGGCTCGTG TGCTTCCAGA CATGGTGTCC CTCCGGGTGA TGGACGTCCA GTACAACAAG 
TTCACGGCTG CCGGAGCCCA GCAGCTCGCT GCCAGCCTTC GGAGGTGTCC TCATGTGGAG 
ACGCTGGCGA TGTGGACGCC CACCATCCCA TTCAGTGTCC AGGAACACCT GCAACAACAG 
GATTCACGGA TCAGCCTGAG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008958622.1
CDS	97..3420
Translation	MELGPLEGGYLELLNSDADPVCLYHFYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPTVVTGSLLVGPVSDCSTLPCLPLPALFNQEPASGQMRLEKTDQIPMPSSSSSLSCLNLPEGPIQFVPTISTLPHGLWQISEAGTGVSSIFIYHGEVPQASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRSLQDTYCAEPAGPDGILVEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRDRPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGLLGRAALDSPPGALAELAKLAWELGRRHQSTLQQDQFPSADVRTWAMAKGLVQHPPGAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSAAALADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPGRLSFLGTRLTPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLRQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAKALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR

Target ORF information:

RefSeq Version	XM_008960374.2
Organism	Pan paniscus(pygmy chimpanzee)
Definition	Pan paniscus class II major histocompatibility complex transactivator (CIITA), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008960374.2

ORF Insert Sequence:

ATGGAGTTGG GGCCCCTAGA AGGTGGCTAC CTGGAGCTTC TTAACAGCGA TGCTGACCCC 
GTGTGCCTCT ACCACTTCTA TGACCAGATG GACCTCGCTG GAGAAGAAGA GATTGAGCTC 
TACTCAGAAC CCGACACAGA CACCATCAAC TGTGACCAGT TCAGCAGGCT GTTGTGTGAC 
ATGGAAGGTG ATGAAGAGAC CAGGGAGGCT TATGCCAATA TCGCGGAACT GGACCAGTAT 
GTCTTCCAGG ACTCCCAGCT GGAGGGCCTG AGCAAAGACA TTTTCATAGA GCACATAGGA 
CCAGATGAAG TGATCGGTGA GAGTATGGAG ATGCCAGCAG AAGTTGGGCA GAAAAGTCAG 
AAAAGACCCT TCCCAGAGGA GCTTCCGGCA GACCTGAAGC ACTGGAAGCC AGCTGAACCC 
CCCACTGTGG TGACTGGCAG TCTCCTAGTG GGACCAGTGA GCGACTGCTC CACCCTGCCC 
TGCCTGCCAC TGCCTGCGCT GTTCAACCAG GAGCCAGCCT CCGGCCAGAT GCGCCTGGAG 
AAAACCGACC AGATTCCCAT GCCTTCCTCC AGTTCCTCGT TGAGCTGCCT GAATCTCCCT 
GAGGGACCCA TCCAGTTTGT CCCCACCATC TCCACTCTGC CCCATGGGCT CTGGCAAATC 
TCTGAGGCTG GAACAGGGGT CTCCAGTATA TTCATCTACC ATGGTGAGGT GCCCCAGGCC 
AGCCAAGTAC CCCCTCCCAG TGGATTCACT GTCCATGGCC TCCCAACATC TCCAGACCGG 
CCAGGCTCCA CCAGCCCCTT CGCTCCATCA GCCACTGACC TGCCCAGCAT GCCTGAACCT 
GCCCTGACTT CCCGAGCAAA CATGACAGAG CACAAGACGT CCCCCACCCA ATGCCAGGCA 
GCTGGAGAGG TCTCCAACAA GCTTCCAAAA TGGCCTGAGC CGGTGGAGCA GTTCTACCGC 
TCACTGCAGG ACACGTATTG TGCCGAGCCC GCAGGCCCCG ATGGCATCCT AGTGGAGGTG 
GATCTGGTGC AGGCCAGGCT GGAGAGGAGC AGCAGCAAGA GCCTGGAGCG GGAACTGGCC 
ACCCCGGACT GGGCAGAACG GCAGCTGGCC CAAGGAGGCC TGGCTGAGGT GCTGTTGGCT 
GCCAAGGAGC ACCGGCGGCC GCGTGAGACA CGAGTGATTG CTGTGCTGGG CAAAGCTGGT 
CAGGGCAAGA GCTATTGGGC TGGGGCAGTG AGCCGGGCCT GGGCTTGTGG CCGGCTTCCC 
CAGTACGACT TTGTCTTCTC TGTCCCCTGC CATTGCTTGA ACCGTCCGGG GGATGCCTAT 
GGCCTGCAGG ATCTGCTCTT CTCCCTGGGC CCACAGCCAC TCGTGGCGGC CGATGAGGTT 
TTCAGCCACA TCTTGAAGAG ACCTGACCGC GTTCTGCTCA TCCTAGACGC CTTCGAGGAG 
CTGGAAGCGC AAGATGGCTT CCTGCACAGC ACGTGCGGAC CGGCACCGGC GGAGCCCTGC 
TCCCTCCGGG GGCTGCTGGC CGGCCTTTTC CAGAAGAAGC TGCTCCGAGG TTGCACCCTC 
CTCCTCACAG CCCGGCCCCG GGGCCGCCTG GTCCAGAGCC TGAGCAAGGC TGACGCCCTA 
TTTGAGCTGT CCGGCTTCTC CATGGAGCAG GCCCAGGCCT ACGTGATGCG CTACTTTGAG 
AGCTCAGGGA TGACAGAGCA CCAAGACAGA GCCCTGACGC TCCTCCGGGA CCGGCCACTT 
CTTCTCAGTC ACAGCCACAG CCCTACTTTG TGCCGGGCAG TGTGCCAGCT CTCAGAGGCC 
CTGCTGGAGC TTGGGGAGGA CGCCAAGCTT CCCTCCACGC TCACGGGACT CTATGTCGGC 
CTGCTGGGCC GTGCAGCCCT CGACAGCCCC CCCGGGGCCC TGGCAGAGCT GGCCAAGCTG 
GCCTGGGAGC TGGGCCGCAG ACATCAAAGT ACCCTACAGC AGGACCAGTT CCCATCCGCA 
GACGTGAGGA CCTGGGCGAT GGCCAAAGGC TTAGTCCAAC ACCCACCGGG GGCCGCAGAG 
TCCGAGCTGG CCTTCCCCAG CTTCCTCCTG CAATGCTTCC TGGGGGCCCT GTGGCTGGCT 
CTGAGTGGCG AAATCAAGGA CAAGGAGCTC CCGCAGTACC TAGCATTGAC CCCAAGGAAG 
AAGAGGCCCT ATGACAACTG GCTGGAGGGC GTGCCACGCT TTCTGGCTGG GCTGATCTTC 
CAGCCTCGCG CCCGCTGCCT GGGAGCCCTA GTCGGGCCAT CGGCGGCTGC CTTGGCGGAC 
AGGAAGCAGA AGGTGCTTGC GAGGTACCTG AAGCGGCTGC AGCCGGGGAC ACTGCGGGCG 
CGGCAGCTGC TGGAGCTGCT GCACTGCGCC CACGAGGCCG AGGAGGCTGG AATTTGGCAG 
CACGTGGTAC AGGAGCTCCC CGGCCGCCTC TCTTTTCTGG GCACCCGTCT CACGCCTCCT 
GATGCACATG TACTGGGCAA GGCCTTGGAG GCGGCGGGCC AAGACTTCTC CCTGGACCTC 
CGCAGCACTG GCATTTGCCC CTCTGGATTG GGGAGCCTCG TGGGACTCAG CTGTGTCACC 
CGTTTCAGGG CTGCCTTGAG TGACACAGTG GCGCTGTGGG AGTCCCTGCG GCAGCATGGG 
GAGACCAAGC TACTTCAGGC AGCAGAGGAG AAGTTCACCA TCGAGCCTTT CAAAGCCAAG 
TCCCTGAAGG ATGTGGAAGA CCTGGGAAAG CTTGTGCAGA CTCAGAGGAC GAGAAGTTCC 
TCGGAAGACA CAGCTGGGGA GCTCCCTGCT GTTCGGGACC TAAAGAAACT GGAGTTTGCG 
CTGGGCCCTG TCTCAGGCCC CCAGGCTTTC CCCAAACTGG TGCGGATCCT CACGGCCTTT 
TCCTCCCTGC AGCATCTGGA CCTGGATGCG CTGAGTGAGA ACAAGATCGG GGACGAGGGT 
GTCTCGCAGC TCTCAGCCAC CTTCCCCCAG CTGAAGTCCT TGGAAACCCT CAATCTGTCC 
CAGAACAACA TCACTGACCT GGGTGCCTAC AAACTCGCCA AGGCCCTGCC TTCACTCGCT 
GCATCCCTGC TCAGGCTAAG CTTGTACAAT AACTGCATCT GCGACGTGGG AGCCGAGAGC 
TTGGCTCGTG TGCTTCCAGA CATGGTGTCC CTCCGGGTGA TGGACGTCCA GTACAACAAG 
TTCACGGCTG CCGGAGCCCA GCAGCTCGCT GCCAGCCTTC GGAGGTGTCC TCATGTGGAG 
ACGCTGGCGA TGTGGACGCC CACCATCCCA TTCAGTGTCC AGGAACACCT GCAACAACAG 
GATTCACGGA TCAGCCTGAG ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

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CIITA cDNA ORF clone, Pan paniscus(pygmy chimpanzee)

Gene

Clones

gRNAs

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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