Gene Symbol | CAPN3 |
Entrez Gene ID | 443038 |
Full Name | calpain 3 |
Synonyms | SKM-CALPOV,nCL1 |
Gene Type | protein-coding |
Organism | Ovis aries(sheep) |
Learn More
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Ovis aries » CAPN3 cDNA ORF clone
Gene Symbol | CAPN3 |
Entrez Gene ID | 443038 |
Full Name | calpain 3 |
Synonyms | SKM-CALPOV,nCL1 |
Gene Type | protein-coding |
Organism | Ovis aries(sheep) |
mRNA | Protein | Name |
---|---|---|
XM_012180593.2 | XP_012035983.1 | calpain-3 isoform X1 |
XM_012180596.2 | XP_012035986.1 | calpain-3 isoform X3 |
NM_001009212.1 | NP_001009212.1 | calpain-3 |
XM_012180595.2 | XP_012035985.1 | calpain-3 isoform X2 |
XM_012180597.2 | XP_012035987.1 | calpain-3 isoform X4 |
Investigation of biochemical changes of the ovine calpain 3 exon-10 polymorphism.
Muto Y, Morton J, Palmer D
Molecular and cellular probes29(6)382-388(2015 Dec)
Variation in ovine CAPN3 is not associated with meat tenderness.
Zhou H, Frampton CM, Hickford JG
Animal genetics40(2)251-2(2009 Apr)
Single nucleotide polymorphisms of the ovine calpain 3 (CAPN3) gene.
Zhou H, Hickford JG, Fang Q
Molecular and cellular probes21(1)78-9(2007 Feb)
Effect of variants in the ovine skeletal-muscle-specific calpain gene on body weight.
Chung H, Choi B, Jang G, Lee K, Kim H, Yoon S, Im S, Davis M, Hines H
Journal of applied genetics48(1)61-8(2007)
Effect of preslaughter feed withdrawal period on longissimus tenderness and the expression of calpains in the ovine.
Ilian MA, Morton JD, Bekhit AE, Roberts N, Palmer B, Sorimachi H, Bickerstaffe R
Journal of agricultural and food chemistry49(4)1990-8(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CAPN3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CAPN3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSm00079 | |
Clone ID Related Accession (Same CDS sequence) | NM_001009212.1 | |
Accession Version | NM_001009212.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2469bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577289600000 | |
Organism | Ovis aries(sheep) | |
Product | calpain-3 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF087570.1. ##Evidence-Data-START## Transcript exon combination :: AF087570.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA104494974, SAMEA104494985 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001009212.1 |
CDS | 46..2514 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm21592 | |
Clone ID Related Accession (Same CDS sequence) | XM_012180593.2 | |
Accession Version | XM_012180593.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2322bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1450195200000 | |
Organism | Ovis aries(sheep) | |
Product | calpain-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014639016.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 17, 2015 this sequence version replaced XM_012180593.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ovis aries Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012035983.1 |
CDS | 292..2613 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm21593 | |
Clone ID Related Accession (Same CDS sequence) | XM_012180595.2 | |
Accession Version | XM_012180595.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2190bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1450195200000 | |
Organism | Ovis aries(sheep) | |
Product | calpain-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014639016.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 17, 2015 this sequence version replaced XM_012180595.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ovis aries Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012035985.1 |
CDS | 293..2482 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm21594 | |
Clone ID Related Accession (Same CDS sequence) | XM_012180596.2 | |
Accession Version | XM_012180596.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2124bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1450195200000 | |
Organism | Ovis aries(sheep) | |
Product | calpain-3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014639016.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Dec 17, 2015 this sequence version replaced XM_012180596.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ovis aries Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012035986.1 |
CDS | 294..2417 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCGACTG TCATTAGCGC CTCTGTGGCC CCACGGACAG GGGCTGAGCC CAGGTCCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm21595 | |
Clone ID Related Accession (Same CDS sequence) | XM_012180597.2 | |
Accession Version | XM_012180597.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2130bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1450195200000 | |
Organism | Ovis aries(sheep) | |
Product | calpain-3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014639016.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 17, 2015 this sequence version replaced XM_012180597.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ovis aries Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCTACC TGCTGCCAGG ATTCTTCTGT GACCGTGTGA TCCGTGAGAG GGACAGGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012035987.1 |
CDS | 99..2228 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCTACC TGCTGCCAGG ATTCTTCTGT GACCGTGTGA TCCGTGAGAG GGACAGGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Investigation of biochemical changes of the ovine calpain 3 exon-10 polymorphism. |
Variation in ovine CAPN3 is not associated with meat tenderness. |
Single nucleotide polymorphisms of the ovine calpain 3 (CAPN3) gene. |
Effect of variants in the ovine skeletal-muscle-specific calpain gene on body weight. |
Effect of preslaughter feed withdrawal period on longissimus tenderness and the expression of calpains in the ovine. |