LINJ_29_0200 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_29_0200
Entrez Gene ID	5070573
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466504.1	XP_001466541.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_29_0200 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_29_0200 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04123	XM_001466504.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_29_0200 ( XM_001466504.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466541.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc04123
Clone ID Related Accession (Same CDS sequence)	XM_001466504.1
Accession Version	XM_001466504.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3048bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009413). COMPLETENESS: incomplete on both ends.

ATGGAGCACT ACGAGGATTC CTTCGAGAGT ACCACCACGA TGATGGATGA AGAAGAAGAG 
ACCATGTCGG TGCGCACCAG CTCAACGACC GCCACTTCAG GTGGCTCTGT CGACGCTGGC 
GGCGTAGGTG ATGCCGTCTC TGGCGGCAAG GGAATGAGCG ACGTGTTGAC TTTGAGCTCC 
GCCGCAACAC TGTCACCGAC AGCACGGTAT CTGGCTCTAC CCTTGCCTGC ATCCCCAGTG 
CCGGTACCGG TACCTGTGCC GACACTCACC TCTTCGCCGG CATCGGCGCT GAAGGGCGAC 
AGCGAGAGCG GCTTGCACGC GTCGTCCATT TGGTCTGTGC AAAACGCGTT GGCTTCTGAG 
AAGCCGCTTG GATTCGCTCC ATGCGCGACG GTCGGGGCAA TAGAGAGCGA GGAGCGGAGC 
GCGAGTCTGG CTGACAGCGC CGGGGCTAAA CACCCCACCA CGCTCGAGGC ATCGTGCGCT 
GCTCAAGGAG AATTCGTAGG GACCCCCAGC GACGATGCCG ACCATAGTCG TCGAGGGCTA 
AACGGCGTTG ACTTCGAGGC CCTCTCCCAC TTTGTGGCCT TTGGTGGCAG CGGCACCGAC 
AGCACGACGG GGCCAACGTC GCATCGGCAT AGCTCCGTGA TCGGAAGGGG AGTGGAAGGC 
TTCTCATCCC CGCTGGGCAG GATGCTCACC GCCAAGAGAG AGGCAGAAGG CGAGAGCCCG 
AGGGAGGGAG AGGAACTGCG GCCAGCTGCT GACTCTCTAG CTTCCCAGTC AACATCGGCG 
CAGCAGGCGG AGTTGCCACA GAAAACTGTG GCGTCGAAGG CGGCCTCCGT GGCTGCGAGC 
AGCGTCTTCA GCACCCTCTC ACAGCATCTT CAGCAGCAGA AGCCGCAACG ACAGCAGCCA 
CAAACGACCC TTGCGCCAGC GCCAGCGGTC AACTCGGCGC CAGTGGTCCC TTCAATACCA 
ACGCCTGCAA CCGCCCTGCC CACAATGCCG CCTGCCTCCG TTAAAGGGCC GACAACGTCA 
CCAGCGCCGC AAGCCTGCGC TTCTCTTTCT CTCCCAGCTC TGCCGCCACC GGGATGGTCT 
TCTACGACTG TTCCCAACAA TGCCACCGCT GGTATGGAGA CGCCATTCAC CGTCCTACCC 
GCGGCGGCGG CGGCGAAGGA AGCGACGGAC ATGCAACACG GGTGGATGAT TGGTGGTGTG 
CAGTACCGCA CCAGCCCCAC AGATAAGGAG GCGGTTCAGC AGATACCCCC GCTGCCCCCG 
CCGTACGAGC ATCCTCGGCC CACTGCAGAA CAGACGCGCA TATCCTCGCT CCGCGAGGCG 
TCGGAGGCGG TGGAGAGGCT AGTGAAGGCC TTCGCGATGC TGAAGGGATA CAACCGTCTC 
GAGCAGGCGC AAAGCAGAAG TCGCCCCCTC GCTGACGGTG TACCGGCCTC AGTGAAAGCG 
GCAGCCGATG TCGTCGCCTC TGCTCGTCAG GCTAGGATTG CATCCACTGT GCAGGTGCGC 
GACACTGTCC GGTCTCGCGG ATCGCGCGTT CGTGCACCTG GAGTGGCGTC GGCGGCCACT 
CTTGCCTCCA CCTCGGCTGC CGCCGCCTCG CTGCCGTTGG TGTCTGCCCC TCGCCGAGAA 
GACAGCGAGA GCGTGGCCGA AGGTGCCGTG CTGGACTGCG TGCTCGGCCT CTTACAGGAG 
CGTGCAAGGG GCACCGGGAC TTCTTCCGCG GGTGAGTACG AGGAGGAGGG AGTCAGGTCG 
ACGAAGCGCC CAACGGCGGC ATCGTCGTGG CAGGCGGCGA GACCCCACTA CGAGGTGGTG 
ACGGCCGACA CTTTTGCTCA CGGAGGAGGC GTGGGGGGGC ACGGCCGAGC TTCGCACTTC 
ACCGCCGGCA CCGTGTCTGC GGCCGCGCGG ACCCAAGCGT ACTTCAACTC ATCATCCGCC 
TTCCAGGGCG GGCTCGGTAG CAGTGGCGTC CCCTTGTTCG ACCCCCGAGA TCTGCAGAGC 
GCCGTCGATC TCTACAATGC CGTGCGCGAG GCGCTGGACA AGTACGTGCT GCGCCGCGTG 
GCGACCGGCA TAGAGAAAGC AGAGGGACTT CAGCCGCACG TCTCTGCCCC CCGCGCACGC 
TCCATCACCG CCATATTTGC GTGGGCGCTG CTGCTGGACA TGATAAATCT CTGTGAGGAG 
ATCGCGCGTG TCGCCTACGA TGCAGCGCCG CGCACCCCGA GCGCCGTGTA CCCCGTGCTC 
GTACAGTTCA GGGGAGATGC GGCGTGCGAG GAGGTTGCCA AGGCGGCGAT GCACTGCCTG 
CCCTTTGAGG CACTCAACAC CAGCGGTGCT GCCACCTTGG CGCCAGGGGA TGGCGGCTGC 
ACGTTCCGGA TGGCATGCTG GGTGACGCAG CAGCAGCTCT GGACTATCGC CGACGCTTTG 
GCCGACACGG TCCGCGAGGA CATGGTGCGA CGCGCCAAGG CGCTGCCGTA CTCTCCCTTT 
AACGCGGCCG CAGTGACCGA GGTTGATCCT CGGGTGCTGG TTCCTCCCAC GACTCCAATG 
CTCACCCTGC GGCCGCTGCC GGGGCGGAGA GGTGGCGGTG CCGTGCCAAA GGTGTCCGAT 
ACCTCCACGA CTGCAGGCAC TGCCGCGTCG TACGCACGAG TGCATGGGGG CGGCAGAGGG 
GAGGGAGGAG GCCCGGAAAG TGGCAGCTCT GGCAACGAGC TCTTCGAGGT GCCTGCCGCC 
GCGTTGCAGA AGGTTGCCTA CCACGTTTCT GTTCTCACCA CGGATTTGCT CTCTGACATG 
AGCACCGCCA ACCATCACGA GCTGTCGGCG CTGACTGCTG AGGATTACCC CGATGTTGCC 
ACCGCCGTCT CCGAAACCAT GAGCGAACTG CTTCAGGACG AGTCCATCAA AGCGGCCGTG 
CGGCGGCGAG CTGCAGAAAA GGTGAAGCAG GCGCAAAGGG CGCGCGCCGA CTTCGCCGCA 
ACGTCGCGCC AACGCAAGGA GCAAGCCATC ATCGAGAAGG CGGAGAAGGA GGCGGAGGAG 
GTGGTGCAGC ACATTCTGCA AGAGATGAGA GCACAGGGAG TTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466541.1
CDS	1..3048
Translation	MEHYEDSFESTTTMMDEEEETMSVRTSSTTATSGGSVDAGGVGDAVSGGKGMSDVLTLSSAATLSPTARYLALPLPASPVPVPVPVPTLTSSPASALKGDSESGLHASSIWSVQNALASEKPLGFAPCATVGAIESEERSASLADSAGAKHPTTLEASCAAQGEFVGTPSDDADHSRRGLNGVDFEALSHFVAFGGSGTDSTTGPTSHRHSSVIGRGVEGFSSPLGRMLTAKREAEGESPREGEELRPAADSLASQSTSAQQAELPQKTVASKAASVAASSVFSTLSQHLQQQKPQRQQPQTTLAPAPAVNSAPVVPSIPTPATALPTMPPASVKGPTTSPAPQACASLSLPALPPPGWSSTTVPNNATAGMETPFTVLPAAAAAKEATDMQHGWMIGGVQYRTSPTDKEAVQQIPPLPPPYEHPRPTAEQTRISSLREASEAVERLVKAFAMLKGYNRLEQAQSRSRPLADGVPASVKAAADVVASARQARIASTVQVRDTVRSRGSRVRAPGVASAATLASTSAAAASLPLVSAPRREDSESVAEGAVLDCVLGLLQERARGTGTSSAGEYEEEGVRSTKRPTAASSWQAARPHYEVVTADTFAHGGGVGGHGRASHFTAGTVSAAARTQAYFNSSSAFQGGLGSSGVPLFDPRDLQSAVDLYNAVREALDKYVLRRVATGIEKAEGLQPHVSAPRARSITAIFAWALLLDMINLCEEIARVAYDAAPRTPSAVYPVLVQFRGDAACEEVAKAAMHCLPFEALNTSGAATLAPGDGGCTFRMACWVTQQQLWTIADALADTVREDMVRRAKALPYSPFNAAAVTEVDPRVLVPPTTPMLTLRPLPGRRGGGAVPKVSDTSTTAGTAASYARVHGGGRGEGGGPESGSSGNELFEVPAAALQKVAYHVSVLTTDLLSDMSTANHHELSALTAEDYPDVATAVSETMSELLQDESIKAAVRRRAAEKVKQAQRARADFAATSRQRKEQAIIEKAEKEAEEVVQHILQEMRAQGVA

Target ORF information:

RefSeq Version	XM_001466504.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466504.1

ORF Insert Sequence:

ATGGAGCACT ACGAGGATTC CTTCGAGAGT ACCACCACGA TGATGGATGA AGAAGAAGAG 
ACCATGTCGG TGCGCACCAG CTCAACGACC GCCACTTCAG GTGGCTCTGT CGACGCTGGC 
GGCGTAGGTG ATGCCGTCTC TGGCGGCAAG GGAATGAGCG ACGTGTTGAC TTTGAGCTCC 
GCCGCAACAC TGTCACCGAC AGCACGGTAT CTGGCTCTAC CCTTGCCTGC ATCCCCAGTG 
CCGGTACCGG TACCTGTGCC GACACTCACC TCTTCGCCGG CATCGGCGCT GAAGGGCGAC 
AGCGAGAGCG GCTTGCACGC GTCGTCCATT TGGTCTGTGC AAAACGCGTT GGCTTCTGAG 
AAGCCGCTTG GATTCGCTCC ATGCGCGACG GTCGGGGCAA TAGAGAGCGA GGAGCGGAGC 
GCGAGTCTGG CTGACAGCGC CGGGGCTAAA CACCCCACCA CGCTCGAGGC ATCGTGCGCT 
GCTCAAGGAG AATTCGTAGG GACCCCCAGC GACGATGCCG ACCATAGTCG TCGAGGGCTA 
AACGGCGTTG ACTTCGAGGC CCTCTCCCAC TTTGTGGCCT TTGGTGGCAG CGGCACCGAC 
AGCACGACGG GGCCAACGTC GCATCGGCAT AGCTCCGTGA TCGGAAGGGG AGTGGAAGGC 
TTCTCATCCC CGCTGGGCAG GATGCTCACC GCCAAGAGAG AGGCAGAAGG CGAGAGCCCG 
AGGGAGGGAG AGGAACTGCG GCCAGCTGCT GACTCTCTAG CTTCCCAGTC AACATCGGCG 
CAGCAGGCGG AGTTGCCACA GAAAACTGTG GCGTCGAAGG CGGCCTCCGT GGCTGCGAGC 
AGCGTCTTCA GCACCCTCTC ACAGCATCTT CAGCAGCAGA AGCCGCAACG ACAGCAGCCA 
CAAACGACCC TTGCGCCAGC GCCAGCGGTC AACTCGGCGC CAGTGGTCCC TTCAATACCA 
ACGCCTGCAA CCGCCCTGCC CACAATGCCG CCTGCCTCCG TTAAAGGGCC GACAACGTCA 
CCAGCGCCGC AAGCCTGCGC TTCTCTTTCT CTCCCAGCTC TGCCGCCACC GGGATGGTCT 
TCTACGACTG TTCCCAACAA TGCCACCGCT GGTATGGAGA CGCCATTCAC CGTCCTACCC 
GCGGCGGCGG CGGCGAAGGA AGCGACGGAC ATGCAACACG GGTGGATGAT TGGTGGTGTG 
CAGTACCGCA CCAGCCCCAC AGATAAGGAG GCGGTTCAGC AGATACCCCC GCTGCCCCCG 
CCGTACGAGC ATCCTCGGCC CACTGCAGAA CAGACGCGCA TATCCTCGCT CCGCGAGGCG 
TCGGAGGCGG TGGAGAGGCT AGTGAAGGCC TTCGCGATGC TGAAGGGATA CAACCGTCTC 
GAGCAGGCGC AAAGCAGAAG TCGCCCCCTC GCTGACGGTG TACCGGCCTC AGTGAAAGCG 
GCAGCCGATG TCGTCGCCTC TGCTCGTCAG GCTAGGATTG CATCCACTGT GCAGGTGCGC 
GACACTGTCC GGTCTCGCGG ATCGCGCGTT CGTGCACCTG GAGTGGCGTC GGCGGCCACT 
CTTGCCTCCA CCTCGGCTGC CGCCGCCTCG CTGCCGTTGG TGTCTGCCCC TCGCCGAGAA 
GACAGCGAGA GCGTGGCCGA AGGTGCCGTG CTGGACTGCG TGCTCGGCCT CTTACAGGAG 
CGTGCAAGGG GCACCGGGAC TTCTTCCGCG GGTGAGTACG AGGAGGAGGG AGTCAGGTCG 
ACGAAGCGCC CAACGGCGGC ATCGTCGTGG CAGGCGGCGA GACCCCACTA CGAGGTGGTG 
ACGGCCGACA CTTTTGCTCA CGGAGGAGGC GTGGGGGGGC ACGGCCGAGC TTCGCACTTC 
ACCGCCGGCA CCGTGTCTGC GGCCGCGCGG ACCCAAGCGT ACTTCAACTC ATCATCCGCC 
TTCCAGGGCG GGCTCGGTAG CAGTGGCGTC CCCTTGTTCG ACCCCCGAGA TCTGCAGAGC 
GCCGTCGATC TCTACAATGC CGTGCGCGAG GCGCTGGACA AGTACGTGCT GCGCCGCGTG 
GCGACCGGCA TAGAGAAAGC AGAGGGACTT CAGCCGCACG TCTCTGCCCC CCGCGCACGC 
TCCATCACCG CCATATTTGC GTGGGCGCTG CTGCTGGACA TGATAAATCT CTGTGAGGAG 
ATCGCGCGTG TCGCCTACGA TGCAGCGCCG CGCACCCCGA GCGCCGTGTA CCCCGTGCTC 
GTACAGTTCA GGGGAGATGC GGCGTGCGAG GAGGTTGCCA AGGCGGCGAT GCACTGCCTG 
CCCTTTGAGG CACTCAACAC CAGCGGTGCT GCCACCTTGG CGCCAGGGGA TGGCGGCTGC 
ACGTTCCGGA TGGCATGCTG GGTGACGCAG CAGCAGCTCT GGACTATCGC CGACGCTTTG 
GCCGACACGG TCCGCGAGGA CATGGTGCGA CGCGCCAAGG CGCTGCCGTA CTCTCCCTTT 
AACGCGGCCG CAGTGACCGA GGTTGATCCT CGGGTGCTGG TTCCTCCCAC GACTCCAATG 
CTCACCCTGC GGCCGCTGCC GGGGCGGAGA GGTGGCGGTG CCGTGCCAAA GGTGTCCGAT 
ACCTCCACGA CTGCAGGCAC TGCCGCGTCG TACGCACGAG TGCATGGGGG CGGCAGAGGG 
GAGGGAGGAG GCCCGGAAAG TGGCAGCTCT GGCAACGAGC TCTTCGAGGT GCCTGCCGCC 
GCGTTGCAGA AGGTTGCCTA CCACGTTTCT GTTCTCACCA CGGATTTGCT CTCTGACATG 
AGCACCGCCA ACCATCACGA GCTGTCGGCG CTGACTGCTG AGGATTACCC CGATGTTGCC 
ACCGCCGTCT CCGAAACCAT GAGCGAACTG CTTCAGGACG AGTCCATCAA AGCGGCCGTG 
CGGCGGCGAG CTGCAGAAAA GGTGAAGCAG GCGCAAAGGG CGCGCGCCGA CTTCGCCGCA 
ACGTCGCGCC AACGCAAGGA GCAAGCCATC ATCGAGAAGG CGGAGAAGGA GGCGGAGGAG 
GTGGTGCAGC ACATTCTGCA AGAGATGAGA GCACAGGGAG TTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_29_0200 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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