LINJ.12.0560 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ.12.0560
Entrez Gene ID	10966466
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392252.1	XP_003392300.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ.12.0560 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ.12.0560 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07723	XM_003392252.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ.12.0560 ( XM_003392252.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392300.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc07723
Clone ID Related Accession (Same CDS sequence)	XM_003392252.1
Accession Version	XM_003392252.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3042bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009396). COMPLETENESS: incomplete on both ends.

ATGGATGCTG TTGCTGTGCA GTGCGAGCGG CGCGGCCTCA TAAATGCGGC GACGTGGCTG 
AGTGAGATGA GTCTGCACGC ACTGCCGTCG CTTCTCACGG CCCCGCTGCA GGCGTGCTCA 
TACGGTGGCC ACGGTGGCAA CTCTCTTTGC AGCCCTCTTC ACAGTGTTAT ACATTTGGAT 
AGCGGTGTAT TCGGCAATCA CGCCATAGCA GGAGATGCGC GTGCCGCCCC CTCCGCCGGC 
TGGCAACGCC TGCACCGAGT CGCGCTGGGG TACTTCATCA AGGGCGAGTA TCAGCGCTGC 
CATCATCTGA TTCTGCGCGA GGTGATGCGA AACACGGCGG TTAGCAGCAG TTGCGGCGTC 
CCCTTGCCTT CGACAACGCA GAGGACGTGG CCCATGTCGG TGGGTGAGGT GTCTGACAAT 
GAAGGGGGCC TCTCCTTGCC TCTGCCGGAG GTGGTCCGCG GGTTCCGCAC GACGACGTTG 
CCTCCTCTCC TCCAGTTCCT CAGCCTCTAC GCCCTCTTCA TGGATGGCGT GAAGGCGAAG 
CAGCTGAGTA ACAACGCCTC CCAGGGCGGC GGCGCAGAAA GTAGCGGCAT GGGCCGCAGT 
GGCCAGCAGC GAGCGCTGCA CCCGCACGCA CGAGTGTTGC GTGCTTACCT CCTCGAAGCG 
ATGCGCAACC CAGTAAACAT GCTAAACTTG CCCAGCTCTG GTAACAGCGA CCCTGAGCCA 
CAACACGGCG ACGGTGTAGA TGACGAGGCA GCACTGCACG CCGCCTTTGG AGGAGCTCTT 
CCAAGCGCTC ACCACACGTC GAGCGCGAAG CGCCCGTGGA CGACATCTAG CGCGGTGTGG 
CTGGCGAGCC GCGCCGTCTC AGCGGCAACG ACAACCGGCA TAGCCGCTGT GATGACCACA 
GGCGCCTCTG CCTCTCGGTC CGCGGCAACA AAGCAGGCCG GCTGCACGCA CGACTCAGTC 
TTCCCTCGCA CTGCCGCCTC GCCCGTCTTC TCGAACGTCT CTCCAGCCGG CTCTCCAGCC 
GCAAAAGCAA CGGCGGTGCA AGGCGGCGAA TCGGATGCGG CGCCTACGTC GGACTTGTTG 
CATATAGATC CATACCTGTC GTGGCTCATG GGTGTGGTGC TGCGGGAACT TCGCATGCGC 
CAGGAAAGTG CGACGTTTCT GCTGGCGGCT GTGAGTGTCA ACCCACTACT GCGGTGCGCC 
TGGGAAGACC TCGCGTGCCT CGTGAGTCGT GAGGCGCAGC TGGCCGAGCT GGACGCCGCC 
CTTGATGGAC TAGAGCCGTT TTTCATGGTG GACGTCTTCG CTGCCGAGGT GCGGGGGCTG 
CTGGGGATAA CGCCGGTGTC ATCGGCGCGG CTGCGCATCG CCGCTGCTGC CGCCTCGGCT 
CCAAGCGACG GGTTCGCGCA GTCGCCGCCT TGCTCTGCGC CACCCGAAGG ACGCGCCGCC 
ACCACCACTG CCAAAGCCGG CACGCGCACG TCGTCGCCGC CGCCGCCGCC GCGAACCAAC 
ACCGGCGCAA CGCCGCCCAT CCCCGCCGCC GCGCCGTCCA ACGCGTGGGA GTGCTTCTCT 
CTGCTGTTCC CTGACACGCC GTTCTTCCTC AGCCAGCTCG CACACTTCTA CTACCACCAA 
CGCAACCGTC TCGACCGGGC AGAGGCCCTC TACCAGCGTA TTCGCGCCCT CGACCCGCAC 
TACCTCGCCA TCCTATACGA CTACTCGAAC GTGCTCTACA CGAAGCGCGA TCGTCTGGGC 
CTCAGCAGCC TCGCACAGTC GGTCTACCAG GCGGACGCGT TCCGGGCGGA GACGAACTTT 
GCTGTGGGGA ACTATTACGT GCTGCTCGGC CAGCATGACC GGGCTGCGCT GCACTTCCAT 
CGCGCGACCG CGATCGACCC GCAATGCGCG GAGGCGTGGC TGCTGCTCGG GCACGCCTAC 
GTGGAGGTGA AGAACACGAC AGCCGCCGTG GAGGCCTACC GGACGGCGGT CGAGCTCAAC 
GAGCGCGACT ACCGCGGTTG GTACAACCTG GGACAGATCT ACGAGTTGCT GGAGGCGTAC 
CACCATGCTC TTTACTACTA CTGGCACACC ACGTCCCTGC GCCCGGCGGA TCCGGGGATG 
TGGGTGGCGG TGGCCAACTG CTTGGAGCAC GATGGTCGCA TTGCCGAGAG CATTGCCTGC 
CTAGAACGCG CAGAGACGTA CGACTCGAGC TCCTCGCCGA GCTACCCGGC GTACGTGCGG 
CGGATCGCTA CGCACCACAT CGCCAACTCG AGCTACACAC GTGCCTGCGT GTATCTGGAG 
AAGCTCGCAC AAAGCCCCGC GGCGTCCACG GAGGACCTTC TTCTCGCACT CCCCTTTATC 
GTTCAACATT ACGTGCAGCG GGCGCGGAGC TCAGTTGAGG GGTTTGTCCG CTCTTCAAGC 
CACGACACGG TACTCTTCTC GCCTGGTGCG AATAATGTGT CGCTGATGTC GTCGCCGGCA 
TCGGGTGCGG TGGCGGCGGG CCGGACTGCC CTGCACCACG CGCGCGCTGC TGCGGCACTG 
CAGCACCTCA ACAAAGCTGA AGAGCACCTC AGCACCATGG CGGAGCTTGT GATGCCATCC 
GGTCGAAACG GCGCCGGCAA CGAGGAGGCG GCCCAGACGC CAGCAGCATC GGCTGTGGCT 
GGCGAGAGCG AGCAAGCCGG TGCAGAGAAC AGCGCACCGC AGAGAGCTGC AGAGGATGCA 
TCTAATAGAC GACGGACGCG TCAGCCGCGC AGCGGCCCAG CCGCCAACGC CTCCGTCTCT 
GCTTCGACTT CGGCGGCGCT CGCTGCTGTT GCGGCGACCA CGGCGCAGAG TGCCGGTGAT 
ATGCCACCGG TGGCGTTTGT CCGAAGTCGT CACCAAGAGA TTTGCATGCT GAGAGCGCAG 
GCGATGCATC TTCTTCAAAT CGGAGCGGGT GCAGGCAGCT CGACCCTCCC CGCAGCAGCA 
TCGGCCTCCG CCTCTGCGGC GACGCAGCCG TCGTCTTTGT CATCGCAGCA GCAGCAGCAC 
AGGAACCCGC TTGTGTCGCA GCTGCTGGGC CGCAACCAGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392300.1
CDS	1..3042
Translation	MDAVAVQCERRGLINAATWLSEMSLHALPSLLTAPLQACSYGGHGGNSLCSPLHSVIHLDSGVFGNHAIAGDARAAPSAGWQRLHRVALGYFIKGEYQRCHHLILREVMRNTAVSSSCGVPLPSTTQRTWPMSVGEVSDNEGGLSLPLPEVVRGFRTTTLPPLLQFLSLYALFMDGVKAKQLSNNASQGGGAESSGMGRSGQQRALHPHARVLRAYLLEAMRNPVNMLNLPSSGNSDPEPQHGDGVDDEAALHAAFGGALPSAHHTSSAKRPWTTSSAVWLASRAVSAATTTGIAAVMTTGASASRSAATKQAGCTHDSVFPRTAASPVFSNVSPAGSPAAKATAVQGGESDAAPTSDLLHIDPYLSWLMGVVLRELRMRQESATFLLAAVSVNPLLRCAWEDLACLVSREAQLAELDAALDGLEPFFMVDVFAAEVRGLLGITPVSSARLRIAAAAASAPSDGFAQSPPCSAPPEGRAATTTAKAGTRTSSPPPPPRTNTGATPPIPAAAPSNAWECFSLLFPDTPFFLSQLAHFYYHQRNRLDRAEALYQRIRALDPHYLAILYDYSNVLYTKRDRLGLSSLAQSVYQADAFRAETNFAVGNYYVLLGQHDRAALHFHRATAIDPQCAEAWLLLGHAYVEVKNTTAAVEAYRTAVELNERDYRGWYNLGQIYELLEAYHHALYYYWHTTSLRPADPGMWVAVANCLEHDGRIAESIACLERAETYDSSSSPSYPAYVRRIATHHIANSSYTRACVYLEKLAQSPAASTEDLLLALPFIVQHYVQRARSSVEGFVRSSSHDTVLFSPGANNVSLMSSPASGAVAAGRTALHHARAAAALQHLNKAEEHLSTMAELVMPSGRNGAGNEEAAQTPAASAVAGESEQAGAENSAPQRAAEDASNRRRTRQPRSGPAANASVSASTSAALAAVAATTAQSAGDMPPVAFVRSRHQEICMLRAQAMHLLQIGAGAGSSTLPAAASASASAATQPSSLSSQQQQHRNPLVSQLLGRNQ

Target ORF information:

RefSeq Version	XM_003392252.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392252.1

ORF Insert Sequence:

ATGGATGCTG TTGCTGTGCA GTGCGAGCGG CGCGGCCTCA TAAATGCGGC GACGTGGCTG 
AGTGAGATGA GTCTGCACGC ACTGCCGTCG CTTCTCACGG CCCCGCTGCA GGCGTGCTCA 
TACGGTGGCC ACGGTGGCAA CTCTCTTTGC AGCCCTCTTC ACAGTGTTAT ACATTTGGAT 
AGCGGTGTAT TCGGCAATCA CGCCATAGCA GGAGATGCGC GTGCCGCCCC CTCCGCCGGC 
TGGCAACGCC TGCACCGAGT CGCGCTGGGG TACTTCATCA AGGGCGAGTA TCAGCGCTGC 
CATCATCTGA TTCTGCGCGA GGTGATGCGA AACACGGCGG TTAGCAGCAG TTGCGGCGTC 
CCCTTGCCTT CGACAACGCA GAGGACGTGG CCCATGTCGG TGGGTGAGGT GTCTGACAAT 
GAAGGGGGCC TCTCCTTGCC TCTGCCGGAG GTGGTCCGCG GGTTCCGCAC GACGACGTTG 
CCTCCTCTCC TCCAGTTCCT CAGCCTCTAC GCCCTCTTCA TGGATGGCGT GAAGGCGAAG 
CAGCTGAGTA ACAACGCCTC CCAGGGCGGC GGCGCAGAAA GTAGCGGCAT GGGCCGCAGT 
GGCCAGCAGC GAGCGCTGCA CCCGCACGCA CGAGTGTTGC GTGCTTACCT CCTCGAAGCG 
ATGCGCAACC CAGTAAACAT GCTAAACTTG CCCAGCTCTG GTAACAGCGA CCCTGAGCCA 
CAACACGGCG ACGGTGTAGA TGACGAGGCA GCACTGCACG CCGCCTTTGG AGGAGCTCTT 
CCAAGCGCTC ACCACACGTC GAGCGCGAAG CGCCCGTGGA CGACATCTAG CGCGGTGTGG 
CTGGCGAGCC GCGCCGTCTC AGCGGCAACG ACAACCGGCA TAGCCGCTGT GATGACCACA 
GGCGCCTCTG CCTCTCGGTC CGCGGCAACA AAGCAGGCCG GCTGCACGCA CGACTCAGTC 
TTCCCTCGCA CTGCCGCCTC GCCCGTCTTC TCGAACGTCT CTCCAGCCGG CTCTCCAGCC 
GCAAAAGCAA CGGCGGTGCA AGGCGGCGAA TCGGATGCGG CGCCTACGTC GGACTTGTTG 
CATATAGATC CATACCTGTC GTGGCTCATG GGTGTGGTGC TGCGGGAACT TCGCATGCGC 
CAGGAAAGTG CGACGTTTCT GCTGGCGGCT GTGAGTGTCA ACCCACTACT GCGGTGCGCC 
TGGGAAGACC TCGCGTGCCT CGTGAGTCGT GAGGCGCAGC TGGCCGAGCT GGACGCCGCC 
CTTGATGGAC TAGAGCCGTT TTTCATGGTG GACGTCTTCG CTGCCGAGGT GCGGGGGCTG 
CTGGGGATAA CGCCGGTGTC ATCGGCGCGG CTGCGCATCG CCGCTGCTGC CGCCTCGGCT 
CCAAGCGACG GGTTCGCGCA GTCGCCGCCT TGCTCTGCGC CACCCGAAGG ACGCGCCGCC 
ACCACCACTG CCAAAGCCGG CACGCGCACG TCGTCGCCGC CGCCGCCGCC GCGAACCAAC 
ACCGGCGCAA CGCCGCCCAT CCCCGCCGCC GCGCCGTCCA ACGCGTGGGA GTGCTTCTCT 
CTGCTGTTCC CTGACACGCC GTTCTTCCTC AGCCAGCTCG CACACTTCTA CTACCACCAA 
CGCAACCGTC TCGACCGGGC AGAGGCCCTC TACCAGCGTA TTCGCGCCCT CGACCCGCAC 
TACCTCGCCA TCCTATACGA CTACTCGAAC GTGCTCTACA CGAAGCGCGA TCGTCTGGGC 
CTCAGCAGCC TCGCACAGTC GGTCTACCAG GCGGACGCGT TCCGGGCGGA GACGAACTTT 
GCTGTGGGGA ACTATTACGT GCTGCTCGGC CAGCATGACC GGGCTGCGCT GCACTTCCAT 
CGCGCGACCG CGATCGACCC GCAATGCGCG GAGGCGTGGC TGCTGCTCGG GCACGCCTAC 
GTGGAGGTGA AGAACACGAC AGCCGCCGTG GAGGCCTACC GGACGGCGGT CGAGCTCAAC 
GAGCGCGACT ACCGCGGTTG GTACAACCTG GGACAGATCT ACGAGTTGCT GGAGGCGTAC 
CACCATGCTC TTTACTACTA CTGGCACACC ACGTCCCTGC GCCCGGCGGA TCCGGGGATG 
TGGGTGGCGG TGGCCAACTG CTTGGAGCAC GATGGTCGCA TTGCCGAGAG CATTGCCTGC 
CTAGAACGCG CAGAGACGTA CGACTCGAGC TCCTCGCCGA GCTACCCGGC GTACGTGCGG 
CGGATCGCTA CGCACCACAT CGCCAACTCG AGCTACACAC GTGCCTGCGT GTATCTGGAG 
AAGCTCGCAC AAAGCCCCGC GGCGTCCACG GAGGACCTTC TTCTCGCACT CCCCTTTATC 
GTTCAACATT ACGTGCAGCG GGCGCGGAGC TCAGTTGAGG GGTTTGTCCG CTCTTCAAGC 
CACGACACGG TACTCTTCTC GCCTGGTGCG AATAATGTGT CGCTGATGTC GTCGCCGGCA 
TCGGGTGCGG TGGCGGCGGG CCGGACTGCC CTGCACCACG CGCGCGCTGC TGCGGCACTG 
CAGCACCTCA ACAAAGCTGA AGAGCACCTC AGCACCATGG CGGAGCTTGT GATGCCATCC 
GGTCGAAACG GCGCCGGCAA CGAGGAGGCG GCCCAGACGC CAGCAGCATC GGCTGTGGCT 
GGCGAGAGCG AGCAAGCCGG TGCAGAGAAC AGCGCACCGC AGAGAGCTGC AGAGGATGCA 
TCTAATAGAC GACGGACGCG TCAGCCGCGC AGCGGCCCAG CCGCCAACGC CTCCGTCTCT 
GCTTCGACTT CGGCGGCGCT CGCTGCTGTT GCGGCGACCA CGGCGCAGAG TGCCGGTGAT 
ATGCCACCGG TGGCGTTTGT CCGAAGTCGT CACCAAGAGA TTTGCATGCT GAGAGCGCAG 
GCGATGCATC TTCTTCAAAT CGGAGCGGGT GCAGGCAGCT CGACCCTCCC CGCAGCAGCA 
TCGGCCTCCG CCTCTGCGGC GACGCAGCCG TCGTCTTTGT CATCGCAGCA GCAGCAGCAC 
AGGAACCCGC TTGTGTCGCA GCTGCTGGGC CGCAACCAGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ.12.0560 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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