Gene Symbol | TNFSF13 |
Entrez Gene ID | 100147233 |
Full Name | TNF superfamily member 13 |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
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ORF » Species Summary » Equus caballus » TNFSF13 cDNA ORF clone
Gene Symbol | TNFSF13 |
Entrez Gene ID | 100147233 |
Full Name | TNF superfamily member 13 |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
mRNA | Protein | Name |
---|---|---|
XM_014736161.1 | XP_014591647.1 | tumor necrosis factor ligand superfamily member 13 isoform X2 |
XM_005597029.2 | XP_005597086.1 | tumor necrosis factor ligand superfamily member 13 isoform X3 |
XM_014736158.2 | XP_014591644.1 | tumor necrosis factor ligand superfamily member 13 isoform X1 |
NM_001205161.1 | NP_001192090.1 | tumor necrosis factor ligand superfamily member 13 |
XM_014736158.1 | XP_014591644.1 | tumor necrosis factor ligand superfamily member 13 isoform X1 |
XM_014736161.2 | XP_014591647.1 | tumor necrosis factor ligand superfamily member 13 isoform X2 |
Comparative genomic analysis of eutherian tumor necrosis factor ligand genes.
Premzl M
Immunogenetics68(2)125-32(2016 Feb)
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand MS, Kalbfleisch TS, Coleman SJ, Zeng Z, Liu J, Orlando L, MacLeod JN
PloS one10(6)e0124375(2015)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TNFSF13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TNFSF13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHb27822 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205161.1 | |
Accession Version | NM_001205161.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1530028800000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from PJAA01000012.1. On Mar 27, 2011 this sequence version replaced XM_001918372.1. Sequence Note: This RefSeq record was created from genomic sequence data to make the sequence consistent with the reference genome assembly. There are no horse transcripts representing this gene; the genomic coordinates used for the transcript record were predicted based on full-length homologous alignment with human NM_003808.3. ##Evidence-Data-START## Transcript exon combination :: GU982935.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2452530, SAMEA2452531 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001192090.1 |
CDS | 745..1497 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb01715 | |
Clone ID Related Accession (Same CDS sequence) | XM_005597029.2 | |
Accession Version | XM_005597029.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 798bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1447862400000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867366.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 20, 2015 this sequence version replaced XM_005597029.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005597086.1 |
CDS | 1107..1904 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb33536 | |
Clone ID Related Accession (Same CDS sequence) | XM_014736158.2 , XM_014736158.1 | |
Accession Version | XM_014736158.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1059bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1516550400000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009154.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014736158.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014591644.1 |
CDS | 1035..2093 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb33536 | |
Clone ID Related Accession (Same CDS sequence) | XM_014736158.2 , XM_014736158.1 | |
Accession Version | XM_014736158.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1059bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1447862400000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867366.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014591644.1 |
CDS | 1107..2165 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb33537 | |
Clone ID Related Accession (Same CDS sequence) | XM_014736161.1 , XM_014736161.2 | |
Accession Version | XM_014736161.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1447862400000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867366.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014591647.1 |
CDS | 1107..2120 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb33537 | |
Clone ID Related Accession (Same CDS sequence) | XM_014736161.1 , XM_014736161.2 | |
Accession Version | XM_014736161.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1516550400000 | |
Organism | Equus caballus(horse) | |
Product | tumor necrosis factor ligand superfamily member 13 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009154.3) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014736161.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014591647.1 |
CDS | 1035..2048 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCAGCTT CATCTCCTTC CTTGCTAGCC CCCAAAGGGC CCCGGGGAGA CATGGGGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Comparative genomic analysis of eutherian tumor necrosis factor ligand genes. |
Annotation of the Protein Coding Regions of the Equine Genome. |