ytr cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	ytr
Entrez Gene ID	47457
Full Name	yantar
Synonyms	CG18426,Dmel\CG18426,YTR,Ytr,b(2)gcn,bgcn,l(2)60A-F,l(2)k13108,l(2)k13214
General protein information	Preferred Names yantar Names CG18426 gene product from transcript CG18426-RB CG18426-PA CG18426-PB ytr-PA ytr-PB
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 60A3-60A3

mRNA and Protein(s)

mRNA	Protein	Name
NM_137995.3	NP_611839.1	yantar, isoform A
NM_001299856.1	NP_001286785.1	yantar, isoform B

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ytr gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ytr cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa11435	NM_137995.3 Latest version!	Drosophila melanogaster yantar (ytr), transcript variant A, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
OFa11435	NM_001299856.1 Latest version!	Drosophila melanogaster yantar (ytr), transcript variant B, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ytr ( NM_137995.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_611839.1 Drosophila melanogaster yantar (ytr), transcript variant A, mRNA.

Price & Availability↑

CloneID	OFa11435
Clone ID Related Accession (Same CDS sequence)	NM_137995.3 , NM_001299856.1
Accession Version	NM_137995.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 585bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	yantar, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_137995.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGCCGCA GCCGAAGTCC CGCCTCGCCG GCGCACAGGA GACGCGAGAA GGAGCGATCC 
GAGCGGAAGA AGCGCAGGGA GCGCCGTTCC CGGGAGCGGG AGGCCATCGG AGTAGCGCCA 
GCCGGAGGAT CCGGATCTGG AGGCGCCGGT CGCCGCGACC GGGAACGGGA TCGCGACCGC 
AGTCGCAGCC GAGATCGGGA GCGGGAACGG GAGCGCGACC GTGCGCGGAG TCGGCGATCT 
AGATCGCGGT CGAGGGTCGC CGGAGGAGGA GGAGGAGGAG GCGGCGGCGG AAGCAGCGGC 
GGCAACAGCA GCTCCGGACC ATCGACGTCG CGAAGGACGA CGAGGAACAA TGCGGCGGCC 
ACAGCTGCCG ACCGGCCCAA GATCAACGAG GCGGACCTGG AGGGTAAATC GCCGGAAGAG 
GTCGAGATGC TGAAGACAAT GGGATTCTGC ACGTTCGACA CCACCAAGAA CAGGAAGGTC 
GAGGGCAACG ATGTCGGAGA AGTGCATGTA ATCCTCAAGC GAAAGTACCG CCAGTACATG 
AATCGCAAGG GTGGCTTCAA CCGGCCGCTC GATTTCGTGG CATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_611839.1
CDS	196..780
Translation	MGRSRSPASPAHRRREKERSERKKRRERRSREREAIGVAPAGGSGSGGAGRRDRERDRDRSRSRDRERERERDRARSRRSRSRSRVAGGGGGGGGGGSSGGNSSSGPSTSRRTTRNNAAATAADRPKINEADLEGKSPEEVEMLKTMGFCTFDTTKNRKVEGNDVGEVHVILKRKYRQYMNRKGGFNRPLDFVA

Target ORF information:

RefSeq Version	NM_137995.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster yantar (ytr), transcript variant A, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_137995.3

ORF Insert Sequence:

ATGGGCCGCA GCCGAAGTCC CGCCTCGCCG GCGCACAGGA GACGCGAGAA GGAGCGATCC 
GAGCGGAAGA AGCGCAGGGA GCGCCGTTCC CGGGAGCGGG AGGCCATCGG AGTAGCGCCA 
GCCGGAGGAT CCGGATCTGG AGGCGCCGGT CGCCGCGACC GGGAACGGGA TCGCGACCGC 
AGTCGCAGCC GAGATCGGGA GCGGGAACGG GAGCGCGACC GTGCGCGGAG TCGGCGATCT 
AGATCGCGGT CGAGGGTCGC CGGAGGAGGA GGAGGAGGAG GCGGCGGCGG AAGCAGCGGC 
GGCAACAGCA GCTCCGGACC ATCGACGTCG CGAAGGACGA CGAGGAACAA TGCGGCGGCC 
ACAGCTGCCG ACCGGCCCAA GATCAACGAG GCGGACCTGG AGGGTAAATC GCCGGAAGAG 
GTCGAGATGC TGAAGACAAT GGGATTCTGC ACGTTCGACA CCACCAAGAA CAGGAAGGTC 
GAGGGCAACG ATGTCGGAGA AGTGCATGTA ATCCTCAAGC GAAAGTACCG CCAGTACATG 
AATCGCAAGG GTGGCTTCAA CCGGCCGCTC GATTTCGTGG CATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

ytr ( NM_001299856.1 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001286785.1 Drosophila melanogaster yantar (ytr), transcript variant B, mRNA.

Price & Availability↑

CloneID	OFa11435
Clone ID Related Accession (Same CDS sequence)	NM_137995.3 , NM_001299856.1
Accession Version	NM_001299856.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 585bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	yantar, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGGCCGCA GCCGAAGTCC CGCCTCGCCG GCGCACAGGA GACGCGAGAA GGAGCGATCC 
GAGCGGAAGA AGCGCAGGGA GCGCCGTTCC CGGGAGCGGG AGGCCATCGG AGTAGCGCCA 
GCCGGAGGAT CCGGATCTGG AGGCGCCGGT CGCCGCGACC GGGAACGGGA TCGCGACCGC 
AGTCGCAGCC GAGATCGGGA GCGGGAACGG GAGCGCGACC GTGCGCGGAG TCGGCGATCT 
AGATCGCGGT CGAGGGTCGC CGGAGGAGGA GGAGGAGGAG GCGGCGGCGG AAGCAGCGGC 
GGCAACAGCA GCTCCGGACC ATCGACGTCG CGAAGGACGA CGAGGAACAA TGCGGCGGCC 
ACAGCTGCCG ACCGGCCCAA GATCAACGAG GCGGACCTGG AGGGTAAATC GCCGGAAGAG 
GTCGAGATGC TGAAGACAAT GGGATTCTGC ACGTTCGACA CCACCAAGAA CAGGAAGGTC 
GAGGGCAACG ATGTCGGAGA AGTGCATGTA ATCCTCAAGC GAAAGTACCG CCAGTACATG 
AATCGCAAGG GTGGCTTCAA CCGGCCGCTC GATTTCGTGG CATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001286785.1
CDS	189..773
Translation	MGRSRSPASPAHRRREKERSERKKRRERRSREREAIGVAPAGGSGSGGAGRRDRERDRDRSRSRDRERERERDRARSRRSRSRSRVAGGGGGGGGGGSSGGNSSSGPSTSRRTTRNNAAATAADRPKINEADLEGKSPEEVEMLKTMGFCTFDTTKNRKVEGNDVGEVHVILKRKYRQYMNRKGGFNRPLDFVA

Target ORF information:

RefSeq Version	NM_001299856.1
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster yantar (ytr), transcript variant B, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001299856.1

ORF Insert Sequence:

ATGGGCCGCA GCCGAAGTCC CGCCTCGCCG GCGCACAGGA GACGCGAGAA GGAGCGATCC 
GAGCGGAAGA AGCGCAGGGA GCGCCGTTCC CGGGAGCGGG AGGCCATCGG AGTAGCGCCA 
GCCGGAGGAT CCGGATCTGG AGGCGCCGGT CGCCGCGACC GGGAACGGGA TCGCGACCGC 
AGTCGCAGCC GAGATCGGGA GCGGGAACGG GAGCGCGACC GTGCGCGGAG TCGGCGATCT 
AGATCGCGGT CGAGGGTCGC CGGAGGAGGA GGAGGAGGAG GCGGCGGCGG AAGCAGCGGC 
GGCAACAGCA GCTCCGGACC ATCGACGTCG CGAAGGACGA CGAGGAACAA TGCGGCGGCC 
ACAGCTGCCG ACCGGCCCAA GATCAACGAG GCGGACCTGG AGGGTAAATC GCCGGAAGAG 
GTCGAGATGC TGAAGACAAT GGGATTCTGC ACGTTCGACA CCACCAAGAA CAGGAAGGTC 
GAGGGCAACG ATGTCGGAGA AGTGCATGTA ATCCTCAAGC GAAAGTACCG CCAGTACATG 
AATCGCAAGG GTGGCTTCAA CCGGCCGCTC GATTTCGTGG CATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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ytr cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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