matn3b cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	matn3b
Entrez Gene ID	497645
Full Name	matrilin 3b
Synonyms	zgc:123028
General protein information	Preferred Names matrilin 3b Names matrilin-3
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005156825.4	XP_005156882.1	matrilin-3 isoform X1
XM_005156827.3	XP_005156884.1	matrilin-3 isoform X3
XM_005156825.3	XP_005156882.1	matrilin-3 isoform X1
NM_001012385.1	NP_001012385.1	matrilin-3 precursor
XM_005156826.3	XP_005156883.1	matrilin-3 isoform X2
XM_005156827.4	XP_005156884.1	matrilin-3 isoform X3
XM_005156826.4	XP_005156883.1	matrilin-3 isoform X2

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Concomitant duplications of opioid peptide and receptor genes before the origin of jawed vertebrates.
Sundström G, Dreborg S, Larhammar D
PloS one5(5)e10512(2010 May)

7SK snRNP/P-TEFb couples transcription elongation with alternative splicing and is essential for vertebrate development.
Barboric M, Lenasi T, Chen H, Johansen EB, Guo S, Peterlin BM
Proceedings of the National Academy of Sciences of the United States of America106(19)7798-803(2009 May)

Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor.
Sémon M, Wolfe KH
Trends in genetics : TIG23(3)108-12(2007 Mar)

Zebrafish (Danio rerio) matrilins: shared and divergent characteristics with their mammalian counterparts.
Ko YP, Kobbe B, Paulsson M, Wagener R
The Biochemical journal386(Pt 2)367-79(2005 Mar)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following matn3b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the matn3b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa33763	NM_001012385.1 Latest version!	Danio rerio matrilin 3b (matn3b), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa18776	XM_005156825.4 Latest version!	Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa18777	XM_005156826.4 Latest version!	Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa18778	XM_005156827.4 Latest version!	Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
View Old Accession Versions >>
ODa18776	XM_005156825.3	Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa18778	XM_005156827.3	Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ODa18777	XM_005156826.3	Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

matn3b ( NM_001012385.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001012385.1 Danio rerio matrilin 3b (matn3b), mRNA.

Price & Availability↑

CloneID	ODa33763
Clone ID Related Accession (Same CDS sequence)	NM_001012385.1
Accession Version	NM_001012385.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	matrilin-3 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ717297.1. ##Evidence-Data-START## Transcript exon combination :: AJ717297.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGGTTTCGA CGCTTGTGCA CATGGGCACA ACTGCGAACA TATTTGTGTC 
AGCAACAATG CTTCTTATTT CTGCAAGTGC AGAGAGGGAT ATGTTATCAA CTCTGACAAG 
AAAACATGCT CTAAACAGAC CAACGAAGAA GCAAGAGCAG ATCTGACTGA AAATGCCTGC 
ATGTGTGAGG CTCAGATTGC CTTTCAGCGG AAAGTTCACA ACAGCATACA GACGCTCTCC 
AGCAGACTGG ATGACATCTC AAACAGAGTC CAGCAGTTTG ATCTTCGTCG TGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001012385.1
CDS	48..1484
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAHGFNPRFYSYHHPNPHQHHPQRPPWKGPPFIYHRPVPIQPVRPISPVQPARPIVPSLPRIPVVLPAPTVPMPVKPIPTLPPPPPPSTQATTTTTTTATTATTSTTTTTTTSTTTSQRVSTPRATTAPAKPPTVPAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCGFDACAHGHNCEHICVSNNASYFCKCREGYVINSDKKTCSKQTNEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	NM_001012385.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001012385.1

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGGTTTCGA CGCTTGTGCA CATGGGCACA ACTGCGAACA TATTTGTGTC 
AGCAACAATG CTTCTTATTT CTGCAAGTGC AGAGAGGGAT ATGTTATCAA CTCTGACAAG 
AAAACATGCT CTAAACAGAC CAACGAAGAA GCAAGAGCAG ATCTGACTGA AAATGCCTGC 
ATGTGTGAGG CTCAGATTGC CTTTCAGCGG AAAGTTCACA ACAGCATACA GACGCTCTCC 
AGCAGACTGG ATGACATCTC AAACAGAGTC CAGCAGTTTG ATCTTCGTCG TGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156825.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156882.1 Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa18776
Clone ID Related Accession (Same CDS sequence)	XM_005156825.4 , XM_005156825.3
Accession Version	XM_005156825.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	matrilin-3 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156825.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGAAGAAGC AAGAGCAGAT CTGACTGAAA ATGCCTGCAT GTGTGAGGCT 
CAGATTGCCT TTCAGCGGAA AGTTCACAAC AGCATACAGA CGCTCTCCAG CAGACTGGAT 
GACATCTCAA ACAGAGTCCA GCAGTTTGAT CTTCGTCGTG CCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156882.1
CDS	94..1398
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAHGFNPRFYSYHHPNPHQHHPQRPPWKGPPFIYHRPVPIQPVRPISPVQPARPIVPSLPRIPVVLPAPTVPMPVKPIPTLPPPPPPSTQATTTTTTTATTATTSTTTTTTTSTTTSQRVSTPRATTAPAKPPTVPAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156825.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156825.4

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGAAGAAGC AAGAGCAGAT CTGACTGAAA ATGCCTGCAT GTGTGAGGCT 
CAGATTGCCT TTCAGCGGAA AGTTCACAAC AGCATACAGA CGCTCTCCAG CAGACTGGAT 
GACATCTCAA ACAGAGTCCA GCAGTTTGAT CTTCGTCGTG CCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156825.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156882.1 Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa18776
Clone ID Related Accession (Same CDS sequence)	XM_005156825.4 , XM_005156825.3
Accession Version	XM_005156825.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	matrilin-3 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156825.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGAAGAAGC AAGAGCAGAT CTGACTGAAA ATGCCTGCAT GTGTGAGGCT 
CAGATTGCCT TTCAGCGGAA AGTTCACAAC AGCATACAGA CGCTCTCCAG CAGACTGGAT 
GACATCTCAA ACAGAGTCCA GCAGTTTGAT CTTCGTCGTG CCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156882.1
CDS	121..1425
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAHGFNPRFYSYHHPNPHQHHPQRPPWKGPPFIYHRPVPIQPVRPISPVQPARPIVPSLPRIPVVLPAPTVPMPVKPIPTLPPPPPPSTQATTTTTTTATTATTSTTTTTTTSTTTSQRVSTPRATTAPAKPPTVPAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156825.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156825.3

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCATGGC 
TTTAATCCCA GGTTTTACAG CTATCATCAT CCCAACCCTC ATCAGCATCA TCCCCAGCGG 
CCGCCCTGGA AAGGGCCTCC CTTCATCTAC CACCGCCCTG TACCTATCCA ACCTGTCCGG 
CCAATCTCAC CAGTCCAACC TGCCCGGCCA ATTGTGCCCT CACTACCCAG AATACCAGTT 
GTGTTACCTG CCCCTACAGT ACCCATGCCA GTGAAACCAA TACCCACTCT TCCCCCTCCA 
CCTCCACCTT CAACACAGGC TACGACTACA ACCACTACAA CCGCTACAAC TGCTACAACC 
TCTACAACGA CTACAACTAC AACTAGCACA ACTACTTCAC AGCGGGTCAG TACCCCCCGT 
GCCACAACTG CCCCTGCCAA GCCTCCCACT GTCCCAGCTC CAGCAGAGCC CTGCAAGAGT 
CGTCCACTTG ACCTGGTCTT CATCATCGAC AGCTCTCGAA GTGTCCGTCC TGCAGAGTTT 
GAGAAGGTCA AAATCTTCCT CTCAGAAATG GTTAACTCTC TGGATATCGG ATCCGATGCC 
ACAAGAGTCG CGCTGGTCAA CTACGCCAGC ACCGTCAACA TTGAGTTCCA TTTGAAAAAG 
TACTTTAGTA AGGCTGAGGT CAAGCAGGCC TTCTCCCGTA TTGATCCACT CTCGACAGGA 
ACCATGACTG GCATGGCTAT CAAAACCGCC ATGGAGCAAG TTTTTACAGA AAATGCTGGA 
GCCCGGCCGT TAAAAAAGGG CATTGGTAAA GTGGCCATTA TTGTGACAGA TGGAAGACCG 
CAAGATAAAG TCGAAGAGGT GTCAGCAGCA GCAAGGGCTT CTGGGATTGA AATATACGCA 
GTAGGAGTGG ACAGAGCAGA AATGCGGTCC CTCAAGCAGA TGGCCAGTCA GCCGCTCGAT 
GACCATGTGT TTTATGTGGA GACATACGGA GTGATCGAGA AACTCACATC CAAGTTTAGG 
GAAACGCTCT GTGAAGAAGC AAGAGCAGAT CTGACTGAAA ATGCCTGCAT GTGTGAGGCT 
CAGATTGCCT TTCAGCGGAA AGTTCACAAC AGCATACAGA CGCTCTCCAG CAGACTGGAT 
GACATCTCAA ACAGAGTCCA GCAGTTTGAT CTTCGTCGTG CCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156826.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156883.1 Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa18777
Clone ID Related Accession (Same CDS sequence)	XM_005156826.3 , XM_005156826.4
Accession Version	XM_005156826.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	matrilin-3 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156826.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGGT TTCGACGCTT GTGCACATGG GCACAACTGC 
GAACATATTT GTGTCAGCAA CAATGCTTCT TATTTCTGCA AGTGCAGAGA GGGATATGTT 
ATCAACTCTG ACAAGAAAAC ATGCTCTAAA CAGACCAACG AAGAAGCAAG AGCAGATCTG 
ACTGAAAATG CCTGCATGTG TGAGGCTCAG ATTGCCTTTC AGCGGAAAGT TCACAACAGC 
ATACAGACGC TCTCCAGCAG ACTGGATGAC ATCTCAAACA GAGTCCAGCA GTTTGATCTT 
CGTCGTGCCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156883.1
CDS	118..1149
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCGFDACAHGHNCEHICVSNNASYFCKCREGYVINSDKKTCSKQTNEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156826.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156826.3

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGGT TTCGACGCTT GTGCACATGG GCACAACTGC 
GAACATATTT GTGTCAGCAA CAATGCTTCT TATTTCTGCA AGTGCAGAGA GGGATATGTT 
ATCAACTCTG ACAAGAAAAC ATGCTCTAAA CAGACCAACG AAGAAGCAAG AGCAGATCTG 
ACTGAAAATG CCTGCATGTG TGAGGCTCAG ATTGCCTTTC AGCGGAAAGT TCACAACAGC 
ATACAGACGC TCTCCAGCAG ACTGGATGAC ATCTCAAACA GAGTCCAGCA GTTTGATCTT 
CGTCGTGCCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156826.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156883.1 Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa18777
Clone ID Related Accession (Same CDS sequence)	XM_005156826.3 , XM_005156826.4
Accession Version	XM_005156826.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1032bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	matrilin-3 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156826.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGGT TTCGACGCTT GTGCACATGG GCACAACTGC 
GAACATATTT GTGTCAGCAA CAATGCTTCT TATTTCTGCA AGTGCAGAGA GGGATATGTT 
ATCAACTCTG ACAAGAAAAC ATGCTCTAAA CAGACCAACG AAGAAGCAAG AGCAGATCTG 
ACTGAAAATG CCTGCATGTG TGAGGCTCAG ATTGCCTTTC AGCGGAAAGT TCACAACAGC 
ATACAGACGC TCTCCAGCAG ACTGGATGAC ATCTCAAACA GAGTCCAGCA GTTTGATCTT 
CGTCGTGCCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156883.1
CDS	84..1115
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCGFDACAHGHNCEHICVSNNASYFCKCREGYVINSDKKTCSKQTNEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156826.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156826.4

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGGT TTCGACGCTT GTGCACATGG GCACAACTGC 
GAACATATTT GTGTCAGCAA CAATGCTTCT TATTTCTGCA AGTGCAGAGA GGGATATGTT 
ATCAACTCTG ACAAGAAAAC ATGCTCTAAA CAGACCAACG AAGAAGCAAG AGCAGATCTG 
ACTGAAAATG CCTGCATGTG TGAGGCTCAG ATTGCCTTTC AGCGGAAAGT TCACAACAGC 
ATACAGACGC TCTCCAGCAG ACTGGATGAC ATCTCAAACA GAGTCCAGCA GTTTGATCTT 
CGTCGTGCCT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156827.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156884.1 Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa18778
Clone ID Related Accession (Same CDS sequence)	XM_005156827.3 , XM_005156827.4
Accession Version	XM_005156827.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 900bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	matrilin-3 isoform X3
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.6) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005156827.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGAA GAAGCAAGAG CAGATCTGAC TGAAAATGCC 
TGCATGTGTG AGGCTCAGAT TGCCTTTCAG CGGAAAGTTC ACAACAGCAT ACAGACGCTC 
TCCAGCAGAC TGGATGACAT CTCAAACAGA GTCCAGCAGT TTGATCTTCG TCGTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156884.1
CDS	119..1018
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156827.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156827.3

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGAA GAAGCAAGAG CAGATCTGAC TGAAAATGCC 
TGCATGTGTG AGGCTCAGAT TGCCTTTCAG CGGAAAGTTC ACAACAGCAT ACAGACGCTC 
TCCAGCAGAC TGGATGACAT CTCAAACAGA GTCCAGCAGT TTGATCTTCG TCGTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

matn3b ( XM_005156827.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005156884.1 Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ODa18778
Clone ID Related Accession (Same CDS sequence)	XM_005156827.3 , XM_005156827.4
Accession Version	XM_005156827.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 900bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	matrilin-3 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007124.7) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005156827.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGAA GAAGCAAGAG CAGATCTGAC TGAAAATGCC 
TGCATGTGTG AGGCTCAGAT TGCCTTTCAG CGGAAAGTTC ACAACAGCAT ACAGACGCTC 
TCCAGCAGAC TGGATGACAT CTCAAACAGA GTCCAGCAGT TTGATCTTCG TCGTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005156884.1
CDS	89..988
Translation	MTCFIYVFAFFLSAFLMEAQGTYGPYARNHNQLYAGRQRSPHISPNIPGHGNSINIGAPAEPCKSRPLDLVFIIDSSRSVRPAEFEKVKIFLSEMVNSLDIGSDATRVALVNYASTVNIEFHLKKYFSKAEVKQAFSRIDPLSTGTMTGMAIKTAMEQVFTENAGARPLKKGIGKVAIIVTDGRPQDKVEEVSAAARASGIEIYAVGVDRAEMRSLKQMASQPLDDHVFYVETYGVIEKLTSKFRETLCEEARADLTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRRA

Target ORF information:

RefSeq Version	XM_005156827.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio matrilin 3b (matn3b), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005156827.4

ORF Insert Sequence:

ATGACATGCT TTATTTACGT TTTTGCCTTT TTTCTGTCTG CATTTTTAAT GGAGGCGCAG 
GGCACGTATG GTCCTTACGC GCGGAACCAC AACCAGCTGT ACGCGGGCCG GCAGAGATCA 
CCTCACATCA GCCCTAATAT ACCTGGACAC GGTAACTCCA TCAACATTGG AGCTCCAGCA 
GAGCCCTGCA AGAGTCGTCC ACTTGACCTG GTCTTCATCA TCGACAGCTC TCGAAGTGTC 
CGTCCTGCAG AGTTTGAGAA GGTCAAAATC TTCCTCTCAG AAATGGTTAA CTCTCTGGAT 
ATCGGATCCG ATGCCACAAG AGTCGCGCTG GTCAACTACG CCAGCACCGT CAACATTGAG 
TTCCATTTGA AAAAGTACTT TAGTAAGGCT GAGGTCAAGC AGGCCTTCTC CCGTATTGAT 
CCACTCTCGA CAGGAACCAT GACTGGCATG GCTATCAAAA CCGCCATGGA GCAAGTTTTT 
ACAGAAAATG CTGGAGCCCG GCCGTTAAAA AAGGGCATTG GTAAAGTGGC CATTATTGTG 
ACAGATGGAA GACCGCAAGA TAAAGTCGAA GAGGTGTCAG CAGCAGCAAG GGCTTCTGGG 
ATTGAAATAT ACGCAGTAGG AGTGGACAGA GCAGAAATGC GGTCCCTCAA GCAGATGGCC 
AGTCAGCCGC TCGATGACCA TGTGTTTTAT GTGGAGACAT ACGGAGTGAT CGAGAAACTC 
ACATCCAAGT TTAGGGAAAC GCTCTGTGAA GAAGCAAGAG CAGATCTGAC TGAAAATGCC 
TGCATGTGTG AGGCTCAGAT TGCCTTTCAG CGGAAAGTTC ACAACAGCAT ACAGACGCTC 
TCCAGCAGAC TGGATGACAT CTCAAACAGA GTCCAGCAGT TTGATCTTCG TCGTGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Concomitant duplications of opioid peptide and receptor genes before the origin of jawed vertebrates.
PloS one5(5)e10512(2010 May)
Sundström G,Dreborg S,Larhammar D

7SK snRNP/P-TEFb couples transcription elongation with alternative splicing and is essential for vertebrate development.
Proceedings of the National Academy of Sciences of the United States of America106(19)7798-803(2009 May)
Barboric M,Lenasi T,Chen H,Johansen EB,Guo S,Peterlin BM

Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor.
Trends in genetics : TIG23(3)108-12(2007 Mar)
Sémon M,Wolfe KH

Zebrafish (Danio rerio) matrilins: shared and divergent characteristics with their mammalian counterparts.
The Biochemical journal386(Pt 2)367-79(2005 Mar)
Ko YP,Kobbe B,Paulsson M,Wagener R

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matn3b cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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