chp1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	chp1
Entrez Gene ID	325361
Full Name	calcineurin-like EF-hand protein 1
Synonyms	chp,si:dkey-41n20.1,wu:fc69b04,zgc:63904
General protein information	Preferred Names calcineurin-like EF-hand protein 1 Names calcineurin B homologous protein 1 calcium binding protein P22
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_199715.1	NP_956009.1	calcineurin B homologous protein 1

Pathways from BioSystems

Homologies

Homo sapiens (human)	CHP1	NP_009167.1
Macaca mulatta (Rhesus monkey)	CHP1	XP_001099956.1
Rattus norvegicus (Norway rat)	Chp1	NP_077053.1
Gallus gallus (chicken)	CHP1	NP_001007931.1
Canis lupus familiaris (dog)	CHP1	XP_535438.1
Pan troglodytes (chimpanzee)	CHP1	XP_523056.2
Bos taurus (cattle)	CHP1	NP_001069044.1
Danio rerio (zebrafish)	chp1	NP_956009.1
Drosophila melanogaster (fruit fly)	elm	NP_001262295.1
Caenorhabditis elegans (roundworm)	F59D6.7	NP_503830.2
Xenopus tropicalis (tropical clawed frog)	chp1	NP_001004859.1
Mus musculus (house mouse)	Chp1	NP_062743.1
Caenorhabditis elegans (roundworm)	ZK856.8	NP_505623.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001760	XP_321323.3

Gene Ontology
Bibliography

Related articles in PubMed

Biallelic CHP1 mutation causes human autosomal recessive ataxia by impairing NHE1 function.
Mendoza-Ferreira N, Coutelier M, Janzen E, Hosseinibarkooie S, Löhr H, Schneider S, Milbradt J, Karakaya M, Riessland M, Pichlo C, Torres-Benito L, Singleton A, Zuchner S, Brice A, Durr A, Hammerschmidt M, Stevanin G, Wirth B
Neurology. Genetics4(1)e209(2018 Feb)

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

Evolutionary and Expression Analyses Show Co-option of
Wang S, Yang Q, Wang Z, Feng S, Li H, Ji D, Zhang S
Frontiers in genetics8225(2017)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following chp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the chp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa03275	NM_199715.1 Latest version!	Danio rerio calcineurin-like EF-hand protein 1 (chp1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

chp1 ( NM_199715.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956009.1 Danio rerio calcineurin-like EF-hand protein 1 (chp1), mRNA.

Price & Availability↑

CloneID	ODa03275
Clone ID Related Accession (Same CDS sequence)	NM_199715.1
Accession Version	NM_199715.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 585bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1548432000000
Organism	Danio rerio(zebrafish)
Product	calcineurin B homologous protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC054566.1. ##Evidence-Data-START## Transcript exon combination :: BC054566.1, AY398327.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGGGCTCCA GAGCTTCGTC TTTACTCAGA GAAGAGGACA TTGAAGAGAT TAAGAAAGAA 
ACTGGATTCT CTCACAGTCA GATCACTCGC CTCTACAGCC GCTTTCACAG TTTGGACAAA 
GGAGAAAACG GAGGACTCAG CCGTGAAGAC TTCCAGAGGA TTCCTGAGTT GGCTATAAAT 
CCTCTCGGCG ATCGGATAAT TAATGCCTTC TTCCCAGAGG GTGAGGATCA GGTGAACTTC 
AGAGGCTTCA TGAGGACTCT GGCTCATTTC CGGCCTGTGG AGGACAATGA GAAGAACAAA 
GACCTGACAG GAGAGCCGCT CAACAGCAGA ACCAACAAAC TGCTCTTTGC ATTCCGGTTA 
TATGACCTCG ACAGAGATGA CAAGATCTCC AGAGATGAGC TGCTCCAGGT GCTGAGGATG 
ATGGTAGGAG TGAACATTTC AGATGAGCAG TTGGGAAGCA TCGCAGACAG AACAATCCAG 
GAGGCAGACA CTAATGGAGA CATGTGCATC TCCTTCAACG AGTTCACCAA GGTATTGGAA 
AAAGTGGATG TCGAACAAAA GATGAGCATC CGTTTCCTTC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956009.1
CDS	161..745
Translation	MGSRASSLLREEDIEEIKKETGFSHSQITRLYSRFHSLDKGENGGLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPVEDNEKNKDLTGEPLNSRTNKLLFAFRLYDLDRDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADTNGDMCISFNEFTKVLEKVDVEQKMSIRFLH

Target ORF information:

RefSeq Version	NM_199715.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio calcineurin-like EF-hand protein 1 (chp1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_199715.1

ORF Insert Sequence:

ATGGGCTCCA GAGCTTCGTC TTTACTCAGA GAAGAGGACA TTGAAGAGAT TAAGAAAGAA 
ACTGGATTCT CTCACAGTCA GATCACTCGC CTCTACAGCC GCTTTCACAG TTTGGACAAA 
GGAGAAAACG GAGGACTCAG CCGTGAAGAC TTCCAGAGGA TTCCTGAGTT GGCTATAAAT 
CCTCTCGGCG ATCGGATAAT TAATGCCTTC TTCCCAGAGG GTGAGGATCA GGTGAACTTC 
AGAGGCTTCA TGAGGACTCT GGCTCATTTC CGGCCTGTGG AGGACAATGA GAAGAACAAA 
GACCTGACAG GAGAGCCGCT CAACAGCAGA ACCAACAAAC TGCTCTTTGC ATTCCGGTTA 
TATGACCTCG ACAGAGATGA CAAGATCTCC AGAGATGAGC TGCTCCAGGT GCTGAGGATG 
ATGGTAGGAG TGAACATTTC AGATGAGCAG TTGGGAAGCA TCGCAGACAG AACAATCCAG 
GAGGCAGACA CTAATGGAGA CATGTGCATC TCCTTCAACG AGTTCACCAA GGTATTGGAA 
AAAGTGGATG TCGAACAAAA GATGAGCATC CGTTTCCTTC ACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Biallelic CHP1 mutation causes human autosomal recessive ataxia by impairing NHE1 function.
Neurology. Genetics4(1)e209(2018 Feb)
Mendoza-Ferreira N,Coutelier M,Janzen E,Hosseinibarkooie S,Löhr H,Schneider S,Milbradt J,Karakaya M,Riessland M,Pichlo C,Torres-Benito L,Singleton A,Zuchner S,Brice A,Durr A,Hammerschmidt M,Stevanin G,Wirth B

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Evolutionary and Expression Analyses Show Co-option of
Frontiers in genetics8225(2017)
Wang S,Yang Q,Wang Z,Feng S,Li H,Ji D,Zhang S

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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chp1 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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