| Gene Symbol | PDGFRA |
| Entrez Gene ID | 100412331 |
| Full Name | platelet derived growth factor receptor alpha |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
IVD Raw Materials
ORF » Species Summary » Callithrix jacchus » PDGFRA cDNA ORF clone
| Gene Symbol | PDGFRA |
| Entrez Gene ID | 100412331 |
| Full Name | platelet derived growth factor receptor alpha |
| Gene Type | protein-coding |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) |
| mRNA | Protein | Name |
|---|---|---|
| XM_008993286.2 | XP_008991534.1 | platelet-derived growth factor receptor alpha isoform X1 |
| NM_001270588.1 | NP_001257517.1 | platelet-derived growth factor receptor alpha precursor |
| XM_008993285.2 | XP_008991533.1 | platelet-derived growth factor receptor alpha isoform X1 |
| XM_017970041.1 | XP_017825530.1 | platelet-derived growth factor receptor alpha isoform X1 |
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences.
Maudhoo MD, Ren D, Gradnigo JS, Gibbs RM, Lubker AC, Moriyama EN, French JA, Norgren RB Jr
GigaScience314(2014)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PDGFRA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PDGFRA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCb21255 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008993286.2 , NM_001270588.1 , XM_008993285.2 , XM_017970041.1 | |
| Accession Version | NM_001270588.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3270bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1556812800000 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | platelet-derived growth factor receptor alpha precursor | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from ACFV01029890.1, ACFV01029889.1 and ACFV01029888.1. On or before Jul 20, 2012 this sequence version replaced XM_002745831.1, XM_003732504.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2707842, SAMEA2707843 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001257517.1 |
| CDS | 200..3469 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001270588.1 |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb21255 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008993286.2 , NM_001270588.1 , XM_008993285.2 , XM_017970041.1 | |
| Accession Version | XM_008993286.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3270bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1472486400000 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | platelet-derived growth factor receptor alpha isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013898.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008993286.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008991534.1 |
| CDS | 582..3851 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008993286.2 |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb21255 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008993286.2 , NM_001270588.1 , XM_008993285.2 , XM_017970041.1 | |
| Accession Version | XM_008993285.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3270bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1472486400000 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | platelet-derived growth factor receptor alpha isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013898.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2016 this sequence version replaced XM_008993285.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008991533.1 |
| CDS | 98..3367 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008993285.2 |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCb21255 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008993286.2 , NM_001270588.1 , XM_008993285.2 , XM_017970041.1 | |
| Accession Version | XM_017970041.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3270bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1472486400000 | |
| Organism | Callithrix jacchus(white-tufted-ear marmoset) | |
| Product | platelet-derived growth factor receptor alpha isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_013898.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Callithrix jacchus Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_017825530.1 |
| CDS | 98..3367 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_017970041.1 |
1 | ATGGGGACTT CCCATCCGGT GTTCCTGGTC CTAGGCTGTC TTCTTACAGG GCTGAGCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. |