BRAFLDRAFT_128289 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene
Clones
gRNAs

Summary

Gene Symbol	BRAFLDRAFT_128289
Entrez Gene ID	7250687
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Branchiostoma floridae(Florida lancelet)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002590149.1	XP_002590195.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutiérrez EL, Dubchak I, Garcia-Fernàndez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
Nature453(7198)1064-71(2008 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BRAFLDRAFT_128289 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BRAFLDRAFT_128289 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBb19301	XM_002590149.1 Latest version!	Branchiostoma floridae hypothetical protein, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BRAFLDRAFT_128289 ( XM_002590149.1 ) cDNA ORF clone, Branchiostoma floridae(Florida lancelet) -> XP_002590195.1 Branchiostoma floridae hypothetical protein, mRNA.

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CloneID	OBb19301
Clone ID Related Accession (Same CDS sequence)	XM_002590149.1
Accession Version	XM_002590149.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3459bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1254844800000
Organism	Branchiostoma floridae(Florida lancelet)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003101375). COMPLETENESS: incomplete on the 5' end.

ATGGCGTACA ACTACGTGGT GACCGCACAC AAGCCCACGG CCGTCAACGC CTGCGTCACA 
GGACATTTCA CCGGTCCTGA AGACCTGAAT CTGATCATCG CTAAGAACAC GAGACTTGAG 
ATTTACCTGG TAACTCCGGA GGGCTTGCGT CCGGTCAAAG AAGTCGGCTG CTATGGCCGT 
ATCGCTGTCA TGGAGCTGTT TCGTCCTCCG GGAGAAACCA AGGACCTGCT GTTCATCCTG 
ACAGCTCGTT ATAACGCCTG CATCCTGGAG TACAAACAAG ACGGAGACGA TGTCAGCATT 
GTCACCCGCG CACACGGAAA TGTGCAGGAC AGAATTGGTC GGCCGTCAGA GACAGGCATC 
ATTGGGATCA TCGACCCGGA GTGCCGCATG ATTGGTCTGC GTCTGTACGA CGGACTGTTC 
AAGGTCATCC CTCTGGACCG AGACAACCGC GAGCTAAAGG CCTTCAACAT CAGGTTGGAA 
GAACTGAATG TGATAGATGT GAAGTTCCTG TATGGATGTC AAGTCCCCAC AGTGGTGTTT 
GTTTACCAGG ACCCTCACGG TCGGCATGTG AAGACGTATG AGATCTCGGT GCGAGACAAG 
GAGTTCAGCA AAGGGCCGTG GAAGCAAGAC AATGTGGAGA CTGAGGCGTC CATGGTCATC 
GCTGTGCCAG AGCCGTTCTG TGGTTCCCTC ATCATCGGAC AGGAGTCCAT CACCTATCAC 
AACGGGGACA AGTATGTAGC TGTCGCACCT CCAGCTATTA AGCAAAGCAC GTTGATCTGC 
CATGGGCGCG TGGATGCCAA CGGTAGCCGG TACCTGCTGG GGGACATGTC AGGCCGTCTC 
TTCATGCTGT TGTTGGAGAA GGAAGAGCTG ATCGACGGGT CGGTCACTGT CAAGGACCTC 
AAGGTGGAGC TACTGGGAGA GACATCAATC GCTGAGTGCC TGACATATCT GGACAATGGA 
GTAGTCTACC TCGGGTCTCG ACTGGGCGAC TCTCAGCTTA TCAAGCTGAA CGTGGATGCA 
GACGACAGTG GCTCCTACGT CCACGTGATG GAGACGTTCA CCAACCTGGG TCCCATCGTG 
GACATGTGTG TGGTTGACCT GGAGAGACAG GGTCAGGGAC AGCTGGTCAC TTGTTCCGGG 
GCGTACAAGG AGGGGTCGCT GCGGATCATA CGGAACGGGA TCGGCATTCA CGAACATGCC 
AGCATCGACC TGCCCGGAAT CAAAGGGATT TGGCCCCTGT GTGTGGATCC CAATGGGACA 
ATGGATGATA CATTAGTACT GGCTTTTGTG GGGCAAACAA GAGTGCTTCT GTTGAGTGGG 
GAGGAAGTAG AGGAGACGGA ACTGCCAGGA TTTGAGGACA AACAGACGTT CTTCTGTGGT 
AATGTCATGG GAGGACAACT GCTACAAATA ACAGCCGCCT CTGTACGATT GGTCAGCAGG 
CAGACAAAAC AGCTTGTCAG TGAGTGGAAG CCCCCGTCAG AGAAGAACAT CAGCGTAGCG 
AGCTCCAACA CGACCCAGGT GGTGTGTGCA GTCGGACAGG TTGTCTACTA CATTGAGATC 
CACGAGGGAG AGCTCAAGCA GCTTGGTGAA ACAGTGATGG CCCGTGAGGT GGCGTGTCTG 
GATGTGACTC CGCTGGTGGA GGGGAGTGAC CGAGCCCACC TATGTGCTGT GGGACTGTGG 
ACAGACATCT CTGCACACAT GCTGCAGCTC CCTAACCTGG AGCCCATGCA TGTAGAGATG 
CTGGGGGGAG AAATCATTCC CCGTTCCATC CTGATGACCA CATTTGAGGG GATCCACTAC 
CTTCTGTGTG CGCTGGGCGA TGGGTCGCTT TTCTACTTCA ACCTCAACCC AGAGACAGGC 
AAGAACTTTT CACTCCACAT CCTGACAATA AAATCAAAGG TGACCCTGGG CACCCAGCCA 
ACTGTCCTGC GTACGTTCCG CTCGCTCTCC ACGACCAACG TGTTTGCCTG CTCCGACCGC 
CCCACCGTCA TCTACTCCAG CAACCACAAA CTGGTCTTCT CCAACGTCAA CCTGAAGGAA 
GTCAACTACA TGTGTCCTCT CAACTCACAG GGGTACCCTG ATAGCCTGGC ACTGACCAAT 
GACAGCACAC TTACCATCGG CACCATTGAT GAGATACAAA AACTTCACAT CAGGACTGTG 
CCTCTCTATG AGTCACCCAG GCGGATTGCC TACCAGGAAA CCTCCCAGAC GTTTGGCGTG 
CTCAGCACAC GGACAGAAGT GGAGGACGCC AGCGGCGGGA GCGGAACCCA GCCAGTACGA 
CCATCTGCGA GCACGACAGC CTTGAGCACC AGCGTCAGTC CTAACAAAAA TGCCCTGCGG 
TCATCCAACG ACAGCGACGG TGCCTTCGGC GAGGAGATTG AGATCCACTC CCTCCTAGTG 
GTGGACCAGC ACACCTTTGA AATTCTCCAT GCACACCAGC TGCTGAAGGA TGAGTTTGCC 
CTCAGTATGG TGTCCTGTAA GCTGGGCGAC GACCCCAACA CTTACTTCAT CATTGGCACA 
GCCATGGTCT ATCCTGAGGA GTCAGAACCC AAGTCTGGAC GCATCATCGT CTTCCAGTAC 
ACAGATGGAA AACTGCAGCA GGTTGCTGAG AAGGAAGTGA AGGGAGCTGT GTACTCATTA 
GTACAGTTCA ACAACAAGCT GCTGGCCAGC ATCAACAGTA CGGTGCGTTT GTTTGAGTGG 
ACAGCTGAGA AGGAGCTGCG TGTTGAATGT AACCACTACA ACAACATCCT GGCCCTGTAC 
CTGAAGACTA AAGGTGACTT TATCCTGGTA GGAGACCTCA TGAGATCTGT CACCCTGCTG 
GCCTACAAAC CCATGGAGGG GTGCTTCGAA GAGATTGCCC GTGACTTCAA CCCCAACTGG 
ATGAGTGCTG TAGAGATCTT AGACGATGAC AACTTCCTTG GTGCAGAGAA CTCCTTTAAC 
TTCTTTACTT GTCAGAAAGA CAGTGCTGCC ACAACAGACG AGGAGCGGCA GCACCTACAG 
GAGGTGGGGC ACTTCCACCT GGGGGAGTTT GTCAACGTCT TCAGACATGG TTCTCTGGTG 
ATGCAGCACC CAGGGGAGAC TTCAACCCCC ACCCAGGGGT CCGTCCTGTT TGGTACGGTG 
AACGGCGCGG TCGGTCTGGT GACCCAACTT CCCGCGGACT TCTTCAACTT CCTGCAGGAG 
GTGCAGAGCA AGCTGACCAG AGTCATCAAG TCTGTCGGCA AGATAGAGCA CTCATTCTGG 
CGGTCGTTCA ACACGGAGCG TAAGACGGAA GCCTGCCAGG GGTTCATCGA CGGTGACCTG 
ATCGAGAGCT TCTTAGATCT GTCCCGAGAC AAGATGCAGG AGGTTGTACA GGGGCTACAG 
GTAGGGGGCG CTATTATGGA TGATGGTAGT GGCATGAAGA GAGAATGTAC CGTGGAAGAT 
CTCATTAAGT TAGTAGAGGA GCTCACTCGC ATTCACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002590195.1
CDS	1..3459
Translation	MAYNYVVTAHKPTAVNACVTGHFTGPEDLNLIIAKNTRLEIYLVTPEGLRPVKEVGCYGRIAVMELFRPPGETKDLLFILTARYNACILEYKQDGDDVSIVTRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELNVIDVKFLYGCQVPTVVFVYQDPHGRHVKTYEISVRDKEFSKGPWKQDNVETEASMVIAVPEPFCGSLIIGQESITYHNGDKYVAVAPPAIKQSTLICHGRVDANGSRYLLGDMSGRLFMLLLEKEELIDGSVTVKDLKVELLGETSIAECLTYLDNGVVYLGSRLGDSQLIKLNVDADDSGSYVHVMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLCVDPNGTMDDTLVLAFVGQTRVLLLSGEEVEETELPGFEDKQTFFCGNVMGGQLLQITAASVRLVSRQTKQLVSEWKPPSEKNISVASSNTTQVVCAVGQVVYYIEIHEGELKQLGETVMAREVACLDVTPLVEGSDRAHLCAVGLWTDISAHMLQLPNLEPMHVEMLGGEIIPRSILMTTFEGIHYLLCALGDGSLFYFNLNPETGKNFSLHILTIKSKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSQGYPDSLALTNDSTLTIGTIDEIQKLHIRTVPLYESPRRIAYQETSQTFGVLSTRTEVEDASGGSGTQPVRPSASTTALSTSVSPNKNALRSSNDSDGAFGEEIEIHSLLVVDQHTFEILHAHQLLKDEFALSMVSCKLGDDPNTYFIIGTAMVYPEESEPKSGRIIVFQYTDGKLQQVAEKEVKGAVYSLVQFNNKLLASINSTVRLFEWTAEKELRVECNHYNNILALYLKTKGDFILVGDLMRSVTLLAYKPMEGCFEEIARDFNPNWMSAVEILDDDNFLGAENSFNFFTCQKDSAATTDEERQHLQEVGHFHLGEFVNVFRHGSLVMQHPGETSTPTQGSVLFGTVNGAVGLVTQLPADFFNFLQEVQSKLTRVIKSVGKIEHSFWRSFNTERKTEACQGFIDGDLIESFLDLSRDKMQEVVQGLQVGGAIMDDGSGMKRECTVEDLIKLVEELTRIH

Target ORF information:

RefSeq Version	XM_002590149.1
Organism	Branchiostoma floridae(Florida lancelet)
Definition	Branchiostoma floridae hypothetical protein, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002590149.1

ORF Insert Sequence:

ATGGCGTACA ACTACGTGGT GACCGCACAC AAGCCCACGG CCGTCAACGC CTGCGTCACA 
GGACATTTCA CCGGTCCTGA AGACCTGAAT CTGATCATCG CTAAGAACAC GAGACTTGAG 
ATTTACCTGG TAACTCCGGA GGGCTTGCGT CCGGTCAAAG AAGTCGGCTG CTATGGCCGT 
ATCGCTGTCA TGGAGCTGTT TCGTCCTCCG GGAGAAACCA AGGACCTGCT GTTCATCCTG 
ACAGCTCGTT ATAACGCCTG CATCCTGGAG TACAAACAAG ACGGAGACGA TGTCAGCATT 
GTCACCCGCG CACACGGAAA TGTGCAGGAC AGAATTGGTC GGCCGTCAGA GACAGGCATC 
ATTGGGATCA TCGACCCGGA GTGCCGCATG ATTGGTCTGC GTCTGTACGA CGGACTGTTC 
AAGGTCATCC CTCTGGACCG AGACAACCGC GAGCTAAAGG CCTTCAACAT CAGGTTGGAA 
GAACTGAATG TGATAGATGT GAAGTTCCTG TATGGATGTC AAGTCCCCAC AGTGGTGTTT 
GTTTACCAGG ACCCTCACGG TCGGCATGTG AAGACGTATG AGATCTCGGT GCGAGACAAG 
GAGTTCAGCA AAGGGCCGTG GAAGCAAGAC AATGTGGAGA CTGAGGCGTC CATGGTCATC 
GCTGTGCCAG AGCCGTTCTG TGGTTCCCTC ATCATCGGAC AGGAGTCCAT CACCTATCAC 
AACGGGGACA AGTATGTAGC TGTCGCACCT CCAGCTATTA AGCAAAGCAC GTTGATCTGC 
CATGGGCGCG TGGATGCCAA CGGTAGCCGG TACCTGCTGG GGGACATGTC AGGCCGTCTC 
TTCATGCTGT TGTTGGAGAA GGAAGAGCTG ATCGACGGGT CGGTCACTGT CAAGGACCTC 
AAGGTGGAGC TACTGGGAGA GACATCAATC GCTGAGTGCC TGACATATCT GGACAATGGA 
GTAGTCTACC TCGGGTCTCG ACTGGGCGAC TCTCAGCTTA TCAAGCTGAA CGTGGATGCA 
GACGACAGTG GCTCCTACGT CCACGTGATG GAGACGTTCA CCAACCTGGG TCCCATCGTG 
GACATGTGTG TGGTTGACCT GGAGAGACAG GGTCAGGGAC AGCTGGTCAC TTGTTCCGGG 
GCGTACAAGG AGGGGTCGCT GCGGATCATA CGGAACGGGA TCGGCATTCA CGAACATGCC 
AGCATCGACC TGCCCGGAAT CAAAGGGATT TGGCCCCTGT GTGTGGATCC CAATGGGACA 
ATGGATGATA CATTAGTACT GGCTTTTGTG GGGCAAACAA GAGTGCTTCT GTTGAGTGGG 
GAGGAAGTAG AGGAGACGGA ACTGCCAGGA TTTGAGGACA AACAGACGTT CTTCTGTGGT 
AATGTCATGG GAGGACAACT GCTACAAATA ACAGCCGCCT CTGTACGATT GGTCAGCAGG 
CAGACAAAAC AGCTTGTCAG TGAGTGGAAG CCCCCGTCAG AGAAGAACAT CAGCGTAGCG 
AGCTCCAACA CGACCCAGGT GGTGTGTGCA GTCGGACAGG TTGTCTACTA CATTGAGATC 
CACGAGGGAG AGCTCAAGCA GCTTGGTGAA ACAGTGATGG CCCGTGAGGT GGCGTGTCTG 
GATGTGACTC CGCTGGTGGA GGGGAGTGAC CGAGCCCACC TATGTGCTGT GGGACTGTGG 
ACAGACATCT CTGCACACAT GCTGCAGCTC CCTAACCTGG AGCCCATGCA TGTAGAGATG 
CTGGGGGGAG AAATCATTCC CCGTTCCATC CTGATGACCA CATTTGAGGG GATCCACTAC 
CTTCTGTGTG CGCTGGGCGA TGGGTCGCTT TTCTACTTCA ACCTCAACCC AGAGACAGGC 
AAGAACTTTT CACTCCACAT CCTGACAATA AAATCAAAGG TGACCCTGGG CACCCAGCCA 
ACTGTCCTGC GTACGTTCCG CTCGCTCTCC ACGACCAACG TGTTTGCCTG CTCCGACCGC 
CCCACCGTCA TCTACTCCAG CAACCACAAA CTGGTCTTCT CCAACGTCAA CCTGAAGGAA 
GTCAACTACA TGTGTCCTCT CAACTCACAG GGGTACCCTG ATAGCCTGGC ACTGACCAAT 
GACAGCACAC TTACCATCGG CACCATTGAT GAGATACAAA AACTTCACAT CAGGACTGTG 
CCTCTCTATG AGTCACCCAG GCGGATTGCC TACCAGGAAA CCTCCCAGAC GTTTGGCGTG 
CTCAGCACAC GGACAGAAGT GGAGGACGCC AGCGGCGGGA GCGGAACCCA GCCAGTACGA 
CCATCTGCGA GCACGACAGC CTTGAGCACC AGCGTCAGTC CTAACAAAAA TGCCCTGCGG 
TCATCCAACG ACAGCGACGG TGCCTTCGGC GAGGAGATTG AGATCCACTC CCTCCTAGTG 
GTGGACCAGC ACACCTTTGA AATTCTCCAT GCACACCAGC TGCTGAAGGA TGAGTTTGCC 
CTCAGTATGG TGTCCTGTAA GCTGGGCGAC GACCCCAACA CTTACTTCAT CATTGGCACA 
GCCATGGTCT ATCCTGAGGA GTCAGAACCC AAGTCTGGAC GCATCATCGT CTTCCAGTAC 
ACAGATGGAA AACTGCAGCA GGTTGCTGAG AAGGAAGTGA AGGGAGCTGT GTACTCATTA 
GTACAGTTCA ACAACAAGCT GCTGGCCAGC ATCAACAGTA CGGTGCGTTT GTTTGAGTGG 
ACAGCTGAGA AGGAGCTGCG TGTTGAATGT AACCACTACA ACAACATCCT GGCCCTGTAC 
CTGAAGACTA AAGGTGACTT TATCCTGGTA GGAGACCTCA TGAGATCTGT CACCCTGCTG 
GCCTACAAAC CCATGGAGGG GTGCTTCGAA GAGATTGCCC GTGACTTCAA CCCCAACTGG 
ATGAGTGCTG TAGAGATCTT AGACGATGAC AACTTCCTTG GTGCAGAGAA CTCCTTTAAC 
TTCTTTACTT GTCAGAAAGA CAGTGCTGCC ACAACAGACG AGGAGCGGCA GCACCTACAG 
GAGGTGGGGC ACTTCCACCT GGGGGAGTTT GTCAACGTCT TCAGACATGG TTCTCTGGTG 
ATGCAGCACC CAGGGGAGAC TTCAACCCCC ACCCAGGGGT CCGTCCTGTT TGGTACGGTG 
AACGGCGCGG TCGGTCTGGT GACCCAACTT CCCGCGGACT TCTTCAACTT CCTGCAGGAG 
GTGCAGAGCA AGCTGACCAG AGTCATCAAG TCTGTCGGCA AGATAGAGCA CTCATTCTGG 
CGGTCGTTCA ACACGGAGCG TAAGACGGAA GCCTGCCAGG GGTTCATCGA CGGTGACCTG 
ATCGAGAGCT TCTTAGATCT GTCCCGAGAC AAGATGCAGG AGGTTGTACA GGGGCTACAG 
GTAGGGGGCG CTATTATGGA TGATGGTAGT GGCATGAAGA GAGAATGTAC CGTGGAAGAT 
CTCATTAAGT TAGTAGAGGA GCTCACTCGC ATTCACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Nature453(7198)1064-71(2008 Jun)
Putnam NH,Butts T,Ferrier DE,Furlong RF,Hellsten U,Kawashima T,Robinson-Rechavi M,Shoguchi E,Terry A,Yu JK,Benito-Gutiérrez EL,Dubchak I,Garcia-Fernàndez J,Gibson-Brown JJ,Grigoriev IV,Horton AC,de Jong PJ,Jurka J,Kapitonov VV,Kohara Y,Kuroki Y,Lindquist E,Lucas S,Osoegawa K,Pennacchio LA,Salamov AA,Satou Y,Sauka-Spengler T,Schmutz J,Shin-I T,Toyoda A,Bronner-Fraser M,Fujiyama A,Holland LZ,Holland PW,Satoh N,Rokhsar DS

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BRAFLDRAFT_128289 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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