BRAFLDRAFT_118620 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene
Clones
gRNAs

Summary

Gene Symbol	BRAFLDRAFT_118620
Entrez Gene ID	7220138
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Branchiostoma floridae(Florida lancelet)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002595114.1	XP_002595160.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Benito-Gutiérrez EL, Dubchak I, Garcia-Fernàndez J, Gibson-Brown JJ, Grigoriev IV, Horton AC, de Jong PJ, Jurka J, Kapitonov VV, Kohara Y, Kuroki Y, Lindquist E, Lucas S, Osoegawa K, Pennacchio LA, Salamov AA, Satou Y, Sauka-Spengler T, Schmutz J, Shin-I T, Toyoda A, Bronner-Fraser M, Fujiyama A, Holland LZ, Holland PW, Satoh N, Rokhsar DS
Nature453(7198)1064-71(2008 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BRAFLDRAFT_118620 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BRAFLDRAFT_118620 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBb06756	XM_002595114.1 Latest version!	Branchiostoma floridae hypothetical protein, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BRAFLDRAFT_118620 ( XM_002595114.1 ) cDNA ORF clone, Branchiostoma floridae(Florida lancelet) -> XP_002595160.1 Branchiostoma floridae hypothetical protein, mRNA.

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CloneID	OBb06756
Clone ID Related Accession (Same CDS sequence)	XM_002595114.1
Accession Version	XM_002595114.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3561bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1254844800000
Organism	Branchiostoma floridae(Florida lancelet)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_003101427). COMPLETENESS: incomplete on the 5' end.

ATGGGCCAAA GGAAGTCTAA AATCGAGGCC AAGCCTGTCA ACCCTAAACT ATTCCAGCGA 
CTCTCCACGA GGAACTTATT ATTTGACAAC CCTGCCGCTG AAGAAAAATA TTCGGACTAC 
GATTTTCCCT TTGAAAATCT GGTGTTTGAG GGCGGCGGTA CCAGAGGATT GGCCTATGTC 
GGTGCAGTAA GGGTCCTGGA AGAAGCAGGA GTTATGAGAA AGATCAAGCG GTTCGCAGGG 
GCCAGCGCAG GCGCAATGAT GGCAGCCATG TTGGCTCTCG GGTTCAACTC TCAGGAGATT 
GAGGACTTCC TACAAGTGGA CCTTAGTAAA GAAATGTTGG ACCACTCCTG TGGTTACTGC 
AGCCTTCTCC CCAACATACT GAAAGGCTAC GGCTGGAACC CTGGGAACGG GCTCATGGCC 
TGGTTTGGGA ACATGTTACA GGAACACACC GGAAACCCGG ACCTCACATT CTCACATATG 
TACAAGATGT TCGGCGTTGA GCTGTGTATC GTCGTCACTA ACGTCAATCA AATGGCGGAG 
GAATACTGCC ACGTCAAGAC TACACCTGAC ATGCCGATAA GACTGGCCAT CAGAATGTCC 
ATGTCACTAC CAGGAATCTT CCAAGCCGTT GAACACAGAC ACAAAGACTA CAGCTACCAA 
GACTACTACA TAGACGGCGG CCTGTTGGTT AACTATCCTA TTCACTGCTT CGACGGTTGG 
TGGCTGTCCA TGGACAACAA GGATGCCTTC CTCAACAGGC TGTTCCCGCT AGATAGACTC 
GCTCAACTCT TCGAGAAGAC CGAAAGATTC GGAACGCACA ACCCAAAGTC ACTGGGAATG 
GTCTTGTTCA GTACGTTTGA TGTTGAGTTC ATGCATACGG AACTGTCCAA GAGGTTAGGA 
GACCGAAAGC CAGTCAGACC GAAAACAAAA CTCTCAAAAC AGCGCACGAA AAAACAGCAC 
GAGATGAACG AAGCAGCGAG AAACCACGAG GTAGTGCACA AAGCTGTCAA CAACTTCCTG 
ACTGTCTTAG CGGAGAATAA CACCAACAAG GACGACAAGA TTGAGCTGAG AGAACTGGAA 
CTAGTCTTCA AGAAGATGGA CCAGGCGGGC GCTCGCTTCA CTCAGGAGGA CGCCTCAGTC 
CTGTTCGGAG AGAACGTGGA TCCAATAGAA GTATTTGCGG GTCTGGACAA AGATGATAGC 
GGCTTCATCA CGCATCAGGA GTTGGTGGCG TTCTTAGAAG AGAGAGGATT TAACTTCTTC 
ACGCAGTTCC TAGGGTACAA GCGGCGGCCC ATCGAGTCCT TGGGAGGATT CTTGGAGACG 
ATCATTGAGG CTGTGATGAT CTATATCAAG AGAGTTTACA TTGGGGAAAA GGATGTTCAT 
CGGACGATTG GAATAGACAC GGACTACCTA CCGGGTACCG ACTGGAAGAT GGAACAGGAT 
GACAAAAAGT TCCTAATTTC GCAAGGAGAA CGGGCTGCCA AGGCGTATCT GCGGGAATGG 
GTCAAGGTTC ACAAACTTAC CAAGACTACA GAACCCGACC TGAACGACAT CACCGAGGAG 
GCTGAGACCC AGTCTAGTAC CGAGAGCACC ATTGCTCAAA GGAACCGTCG CAGCGCGTCC 
TCTCAGTCCG GATCCACGTC GTTTATCAAC ATGGGTATCG TAACTTCGAA GCCGAAGAAG 
CCCAAGTATC GCGTCTCGGT GAAGACCGGA GACGTGCAGT TCGCAGGCAC TGACGCCGAC 
GTCTACCTGG CGTTCTACGA CGGCAACGGC AAGCGTTCAC GTGACGTCAA ACTGGACGTC 
ATCTGGAGGA ATGACTTCGA ACGGGGGAGT ACGGATGTGT TCAAACTGGG TGACCTGGGA 
CTGACCGGAC CCATCATGCA GATAGAGGTA TGGCGGGGCC GGCTGCCTGA CGACTGGTAC 
GTGGAAAAGG TAGAGATAGA GAGAATGGGA GAAGGAGAAA CAGATGTGTT CCCGGTTCAT 
CGCTGGATCA GGAAGCAAAC ACGACTGAAG CTGACTAGAT GGGACTCCGT GCTGCCGCAG 
TTCGACCCCA ACCTGGAACA GAGACAGCGA GAGATGGAAG AAATGAGGGC CAACTACGAG 
CTCATGGTAC CACAGGAAGG GCTTCCTCCT AAGATTAAGA ACCTACCACC TGATGAGGAC 
TTTTCTGCTG ACTATAAGTG GAACGTTGCC AAGCGACGAG TGAACATCCG GATGCAGCAG 
AAGATCAGCA GCCTGACCAC GGGCAGGTTC AAGACCTTAG ATGACCTCAT CAACGTGTAC 
GAGGGGGTTC TGGGAACACC CAAGGGTGTA GAAAACTGGA GAGACGACCG TGAGTTCGGC 
AGGCAGCGAC TGTCCGGGTG TAACCCCAAC AGGATAACAC TGTGCACGGA GGTGCCCAAC 
AATTTTGCAG TGACCAATGA GATGGTGGAG CCCTTCCTTG AAGGCCGCTC ATTGGATGAC 
GCACTGCAGG CCAATAGAAT CTTCATGGTC AACTACAAAG TCATGGAGGA CCTTGACCTT 
GAGACTTCAG ATGGCAGACA GCTGTGTTGC CCCATGTGTC TGCTGTACAG GGACATTAAT 
GACGAACTGA ACCCCATCGC AATTCAGCTC TTCCAACATG GAGACCAGAA TCCGGTGTTC 
CTTCCCTCCG ATCCTCCTTA CACCTGGCTG CTGGCTAAGA TGTGGTTCAA CAACGCAGAC 
GCATCATTCC ACCAGTCCAC TACCCACATT GGTCTGACTC ATCTAATGGC TGAGCCCTTT 
GCGGTCTCCG CTAAAAGGCA GCTGTCACGG TCCCACCCAC TATTCAAGCT CATGGCGCCA 
CACTTCATAT TCCTCATCCC CATCAATTTG TTGAAGGAAT GGCGCCTAGA TGTTCAAGGA 
ACACTACCAG CAGACTTAAA GAATCGTGGG GTTGATGACC CAGACATACT GCCTGGCTAT 
TACTTCCGGG ATGATGCAAC CCTCCTCTTC AACGCCATCC ACAAGTACAT CAGGATGGTG 
GTAGAGGCAG TCTACGATGA CCCATCAAAG ATCACAGAAG ACTATGAACT GCAGGCCTGG 
GCTAAGGAGA TTGTTACACC AGCAGAGGAG GGAGGGTGTG GCATGCAGGG TATTTCTGGG 
AACGGACAGT TCACCACGAC AGACCAGATT GTTGCCGTGG TAACGGCAGT TGTGTACATC 
TGCAGTGCTG GTCACGCCGC CGCTAACTTT GCACAGTACG ACGAGTATGG CTTCCCGCCA 
AACTACCCCG CATATCTGCA TGGACAACCG CCCAGGGACA AGACACCAAG GACCGAGCAG 
GACATCATTG ACCAGCTGCC GGACAAGAGT AAGACCCTGG AGATGATGGT CATCACGCGG 
ATGCTGAGTG ACCGCAGCAC CAACGGTCTG GGCATGTTTG AAGTGGAGTA CATGTATGAC 
CCTGTGGGCA CCAAGGCTGT GGCAGAGTTC CGTAAGGACC TGGACAAGAT TCATGAAATC 
ATCAAAGAGA GGAACAAAAC CAGGAAACAG CCTTATACGT ATCTGGATCC AAGGGAGGTC 
CCTAATGCCA TCAGCATCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002595160.1
CDS	1..3561
Translation	MGQRKSKIEAKPVNPKLFQRLSTRNLLFDNPAAEEKYSDYDFPFENLVFEGGGTRGLAYVGAVRVLEEAGVMRKIKRFAGASAGAMMAAMLALGFNSQEIEDFLQVDLSKEMLDHSCGYCSLLPNILKGYGWNPGNGLMAWFGNMLQEHTGNPDLTFSHMYKMFGVELCIVVTNVNQMAEEYCHVKTTPDMPIRLAIRMSMSLPGIFQAVEHRHKDYSYQDYYIDGGLLVNYPIHCFDGWWLSMDNKDAFLNRLFPLDRLAQLFEKTERFGTHNPKSLGMVLFSTFDVEFMHTELSKRLGDRKPVRPKTKLSKQRTKKQHEMNEAARNHEVVHKAVNNFLTVLAENNTNKDDKIELRELELVFKKMDQAGARFTQEDASVLFGENVDPIEVFAGLDKDDSGFITHQELVAFLEERGFNFFTQFLGYKRRPIESLGGFLETIIEAVMIYIKRVYIGEKDVHRTIGIDTDYLPGTDWKMEQDDKKFLISQGERAAKAYLREWVKVHKLTKTTEPDLNDITEEAETQSSTESTIAQRNRRSASSQSGSTSFINMGIVTSKPKKPKYRVSVKTGDVQFAGTDADVYLAFYDGNGKRSRDVKLDVIWRNDFERGSTDVFKLGDLGLTGPIMQIEVWRGRLPDDWYVEKVEIERMGEGETDVFPVHRWIRKQTRLKLTRWDSVLPQFDPNLEQRQREMEEMRANYELMVPQEGLPPKIKNLPPDEDFSADYKWNVAKRRVNIRMQQKISSLTTGRFKTLDDLINVYEGVLGTPKGVENWRDDREFGRQRLSGCNPNRITLCTEVPNNFAVTNEMVEPFLEGRSLDDALQANRIFMVNYKVMEDLDLETSDGRQLCCPMCLLYRDINDELNPIAIQLFQHGDQNPVFLPSDPPYTWLLAKMWFNNADASFHQSTTHIGLTHLMAEPFAVSAKRQLSRSHPLFKLMAPHFIFLIPINLLKEWRLDVQGTLPADLKNRGVDDPDILPGYYFRDDATLLFNAIHKYIRMVVEAVYDDPSKITEDYELQAWAKEIVTPAEEGGCGMQGISGNGQFTTTDQIVAVVTAVVYICSAGHAAANFAQYDEYGFPPNYPAYLHGQPPRDKTPRTEQDIIDQLPDKSKTLEMMVITRMLSDRSTNGLGMFEVEYMYDPVGTKAVAEFRKDLDKIHEIIKERNKTRKQPYTYLDPREVPNAISI

Target ORF information:

RefSeq Version	XM_002595114.1
Organism	Branchiostoma floridae(Florida lancelet)
Definition	Branchiostoma floridae hypothetical protein, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002595114.1

ORF Insert Sequence:

ATGGGCCAAA GGAAGTCTAA AATCGAGGCC AAGCCTGTCA ACCCTAAACT ATTCCAGCGA 
CTCTCCACGA GGAACTTATT ATTTGACAAC CCTGCCGCTG AAGAAAAATA TTCGGACTAC 
GATTTTCCCT TTGAAAATCT GGTGTTTGAG GGCGGCGGTA CCAGAGGATT GGCCTATGTC 
GGTGCAGTAA GGGTCCTGGA AGAAGCAGGA GTTATGAGAA AGATCAAGCG GTTCGCAGGG 
GCCAGCGCAG GCGCAATGAT GGCAGCCATG TTGGCTCTCG GGTTCAACTC TCAGGAGATT 
GAGGACTTCC TACAAGTGGA CCTTAGTAAA GAAATGTTGG ACCACTCCTG TGGTTACTGC 
AGCCTTCTCC CCAACATACT GAAAGGCTAC GGCTGGAACC CTGGGAACGG GCTCATGGCC 
TGGTTTGGGA ACATGTTACA GGAACACACC GGAAACCCGG ACCTCACATT CTCACATATG 
TACAAGATGT TCGGCGTTGA GCTGTGTATC GTCGTCACTA ACGTCAATCA AATGGCGGAG 
GAATACTGCC ACGTCAAGAC TACACCTGAC ATGCCGATAA GACTGGCCAT CAGAATGTCC 
ATGTCACTAC CAGGAATCTT CCAAGCCGTT GAACACAGAC ACAAAGACTA CAGCTACCAA 
GACTACTACA TAGACGGCGG CCTGTTGGTT AACTATCCTA TTCACTGCTT CGACGGTTGG 
TGGCTGTCCA TGGACAACAA GGATGCCTTC CTCAACAGGC TGTTCCCGCT AGATAGACTC 
GCTCAACTCT TCGAGAAGAC CGAAAGATTC GGAACGCACA ACCCAAAGTC ACTGGGAATG 
GTCTTGTTCA GTACGTTTGA TGTTGAGTTC ATGCATACGG AACTGTCCAA GAGGTTAGGA 
GACCGAAAGC CAGTCAGACC GAAAACAAAA CTCTCAAAAC AGCGCACGAA AAAACAGCAC 
GAGATGAACG AAGCAGCGAG AAACCACGAG GTAGTGCACA AAGCTGTCAA CAACTTCCTG 
ACTGTCTTAG CGGAGAATAA CACCAACAAG GACGACAAGA TTGAGCTGAG AGAACTGGAA 
CTAGTCTTCA AGAAGATGGA CCAGGCGGGC GCTCGCTTCA CTCAGGAGGA CGCCTCAGTC 
CTGTTCGGAG AGAACGTGGA TCCAATAGAA GTATTTGCGG GTCTGGACAA AGATGATAGC 
GGCTTCATCA CGCATCAGGA GTTGGTGGCG TTCTTAGAAG AGAGAGGATT TAACTTCTTC 
ACGCAGTTCC TAGGGTACAA GCGGCGGCCC ATCGAGTCCT TGGGAGGATT CTTGGAGACG 
ATCATTGAGG CTGTGATGAT CTATATCAAG AGAGTTTACA TTGGGGAAAA GGATGTTCAT 
CGGACGATTG GAATAGACAC GGACTACCTA CCGGGTACCG ACTGGAAGAT GGAACAGGAT 
GACAAAAAGT TCCTAATTTC GCAAGGAGAA CGGGCTGCCA AGGCGTATCT GCGGGAATGG 
GTCAAGGTTC ACAAACTTAC CAAGACTACA GAACCCGACC TGAACGACAT CACCGAGGAG 
GCTGAGACCC AGTCTAGTAC CGAGAGCACC ATTGCTCAAA GGAACCGTCG CAGCGCGTCC 
TCTCAGTCCG GATCCACGTC GTTTATCAAC ATGGGTATCG TAACTTCGAA GCCGAAGAAG 
CCCAAGTATC GCGTCTCGGT GAAGACCGGA GACGTGCAGT TCGCAGGCAC TGACGCCGAC 
GTCTACCTGG CGTTCTACGA CGGCAACGGC AAGCGTTCAC GTGACGTCAA ACTGGACGTC 
ATCTGGAGGA ATGACTTCGA ACGGGGGAGT ACGGATGTGT TCAAACTGGG TGACCTGGGA 
CTGACCGGAC CCATCATGCA GATAGAGGTA TGGCGGGGCC GGCTGCCTGA CGACTGGTAC 
GTGGAAAAGG TAGAGATAGA GAGAATGGGA GAAGGAGAAA CAGATGTGTT CCCGGTTCAT 
CGCTGGATCA GGAAGCAAAC ACGACTGAAG CTGACTAGAT GGGACTCCGT GCTGCCGCAG 
TTCGACCCCA ACCTGGAACA GAGACAGCGA GAGATGGAAG AAATGAGGGC CAACTACGAG 
CTCATGGTAC CACAGGAAGG GCTTCCTCCT AAGATTAAGA ACCTACCACC TGATGAGGAC 
TTTTCTGCTG ACTATAAGTG GAACGTTGCC AAGCGACGAG TGAACATCCG GATGCAGCAG 
AAGATCAGCA GCCTGACCAC GGGCAGGTTC AAGACCTTAG ATGACCTCAT CAACGTGTAC 
GAGGGGGTTC TGGGAACACC CAAGGGTGTA GAAAACTGGA GAGACGACCG TGAGTTCGGC 
AGGCAGCGAC TGTCCGGGTG TAACCCCAAC AGGATAACAC TGTGCACGGA GGTGCCCAAC 
AATTTTGCAG TGACCAATGA GATGGTGGAG CCCTTCCTTG AAGGCCGCTC ATTGGATGAC 
GCACTGCAGG CCAATAGAAT CTTCATGGTC AACTACAAAG TCATGGAGGA CCTTGACCTT 
GAGACTTCAG ATGGCAGACA GCTGTGTTGC CCCATGTGTC TGCTGTACAG GGACATTAAT 
GACGAACTGA ACCCCATCGC AATTCAGCTC TTCCAACATG GAGACCAGAA TCCGGTGTTC 
CTTCCCTCCG ATCCTCCTTA CACCTGGCTG CTGGCTAAGA TGTGGTTCAA CAACGCAGAC 
GCATCATTCC ACCAGTCCAC TACCCACATT GGTCTGACTC ATCTAATGGC TGAGCCCTTT 
GCGGTCTCCG CTAAAAGGCA GCTGTCACGG TCCCACCCAC TATTCAAGCT CATGGCGCCA 
CACTTCATAT TCCTCATCCC CATCAATTTG TTGAAGGAAT GGCGCCTAGA TGTTCAAGGA 
ACACTACCAG CAGACTTAAA GAATCGTGGG GTTGATGACC CAGACATACT GCCTGGCTAT 
TACTTCCGGG ATGATGCAAC CCTCCTCTTC AACGCCATCC ACAAGTACAT CAGGATGGTG 
GTAGAGGCAG TCTACGATGA CCCATCAAAG ATCACAGAAG ACTATGAACT GCAGGCCTGG 
GCTAAGGAGA TTGTTACACC AGCAGAGGAG GGAGGGTGTG GCATGCAGGG TATTTCTGGG 
AACGGACAGT TCACCACGAC AGACCAGATT GTTGCCGTGG TAACGGCAGT TGTGTACATC 
TGCAGTGCTG GTCACGCCGC CGCTAACTTT GCACAGTACG ACGAGTATGG CTTCCCGCCA 
AACTACCCCG CATATCTGCA TGGACAACCG CCCAGGGACA AGACACCAAG GACCGAGCAG 
GACATCATTG ACCAGCTGCC GGACAAGAGT AAGACCCTGG AGATGATGGT CATCACGCGG 
ATGCTGAGTG ACCGCAGCAC CAACGGTCTG GGCATGTTTG AAGTGGAGTA CATGTATGAC 
CCTGTGGGCA CCAAGGCTGT GGCAGAGTTC CGTAAGGACC TGGACAAGAT TCATGAAATC 
ATCAAAGAGA GGAACAAAAC CAGGAAACAG CCTTATACGT ATCTGGATCC AAGGGAGGTC 
CCTAATGCCA TCAGCATCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The amphioxus genome and the evolution of the chordate karyotype.
Nature453(7198)1064-71(2008 Jun)
Putnam NH,Butts T,Ferrier DE,Furlong RF,Hellsten U,Kawashima T,Robinson-Rechavi M,Shoguchi E,Terry A,Yu JK,Benito-Gutiérrez EL,Dubchak I,Garcia-Fernàndez J,Gibson-Brown JJ,Grigoriev IV,Horton AC,de Jong PJ,Jurka J,Kapitonov VV,Kohara Y,Kuroki Y,Lindquist E,Lucas S,Osoegawa K,Pennacchio LA,Salamov AA,Satou Y,Sauka-Spengler T,Schmutz J,Shin-I T,Toyoda A,Bronner-Fraser M,Fujiyama A,Holland LZ,Holland PW,Satoh N,Rokhsar DS

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BRAFLDRAFT_118620 cDNA ORF clone, Branchiostoma floridae(Florida lancelet)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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