Gene Symbol | LOC101742611 |
Entrez Gene ID | 101742611 |
Full Name | ubiquitin carboxyl-terminal hydrolase isozyme L5 |
Gene Type | protein-coding |
Organism | Bombyx mori(Domestic silkworm) |
ORF » Species Summary » Bombyx mori » LOC101742611 cDNA ORF clone
Gene Symbol | LOC101742611 |
Entrez Gene ID | 101742611 |
Full Name | ubiquitin carboxyl-terminal hydrolase isozyme L5 |
Gene Type | protein-coding |
Organism | Bombyx mori(Domestic silkworm) |
mRNA | Protein | Name |
---|---|---|
XM_021352622.1 | XP_021208297.1 | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2 |
XM_021352621.1 | XP_021208296.1 | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 |
XM_012696331.1 | XP_012551785.1 | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 |
XM_012696332.1 | XP_012551786.1 | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2 |
Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori.
Suetsugu Y, Futahashi R, Kanamori H, Kadono-Okuda K, Sasanuma S, Narukawa J, Ajimura M, Jouraku A, Namiki N, Shimomura M, Sezutsu H, Osanai-Futahashi M, Suzuki MG, Daimon T, Shinoda T, Taniai K, Asaoka K, Niwa R, Kawaoka S, Katsuma S, Tamura T, Noda H, Kasahara M, Sugano S, Suzuki Y, Fujiwara H, Kataoka H, Arunkumar KP, Tomar A, Nagaraju J, Goldsmith MR, Feng Q, Xia Q, Yamamoto K, Shimada T, Mita K
G3 (Bethesda, Md.)3(9)1481-92(2013 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC101742611 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101742611 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBg18532 | |
Clone ID Related Accession (Same CDS sequence) | XM_012696331.1 | |
Accession Version | XM_012696331.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1002bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004582033.1) and transcript sequence (AK378609.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012551785.1 |
CDS | 553..1554 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg18533 | |
Clone ID Related Accession (Same CDS sequence) | XM_012696332.1 | |
Accession Version | XM_012696332.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 936bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004582033.1) and transcript sequence (AK378609.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGATTCTG CCGGGGATTG GTGTCTCCTA GAGAGTGATC CTGGAGTTTT CACTCAGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012551786.1 |
CDS | 155..1090 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGATTCTG CCGGGGATTG GTGTCTCCTA GAGAGTGATC CTGGAGTTTT CACTCAGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg28084 | |
Clone ID Related Accession (Same CDS sequence) | XM_021352621.1 | |
Accession Version | XM_021352621.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1496505600000 | |
Organism | Bombyx mori(domestic silkworm) | |
Product | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004582033.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021208296.1 |
CDS | 145..978 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg28085 | |
Clone ID Related Accession (Same CDS sequence) | XM_021352622.1 | |
Accession Version | XM_021352622.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1038bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1496505600000 | |
Organism | Bombyx mori(domestic silkworm) | |
Product | ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004582033.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021208297.1 |
CDS | 145..1182 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATAACT TTTGTTTCCA AAAACCCTAC AGTGTCAGTG CAGCACCTAA GGCTAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. |