CDX1 cDNA ORF clone, Gallus gallus(chicken)

Gene
Clones
gRNAs

Summary

Gene Symbol	CDX1
Entrez Gene ID	395397
Full Name	caudal type homeobox 1
Synonyms	CDX-A,CDXA,CHOX-CAD1,CHox-cad
General protein information	Preferred Names caudal type homeobox 1 Names homeobox protein CDX-1 caudal type homeo box transcription factor 1 caudal type homeobox transcription factor 1 caudal-type homeodomain protein A caudal-type homeodomain protein, CdxA homeobox protein CHOX-CAD
Gene Type	protein-coding
Organism	Gallus gallus(chicken)

mRNA and Protein(s)

mRNA	Protein	Name
NM_204676.2	NP_990007.2	homeobox protein CDX-1

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	CDX1	NP_990007.2
Danio rerio (zebrafish)	cdx1b	NP_001092232.1
Xenopus tropicalis (tropical clawed frog)	cdx1	NP_989416.1

Gene Ontology
Bibliography

Related articles in PubMed

Vertebrate caudal gene expression gradients investigated by use of chick cdx-A/lacZ and mouse cdx-1/lacZ reporters in transgenic mouse embryos: evidence for an intron enhancer.
Gaunt SJ, Drage D, Cockley A
Mechanisms of development120(5)573-86(2003 May)

Continued expression of the chicken caudal homologue in endodermally derived organs.
Doll U, Niessing J
Developmental biology156(1)155-63(1993 Mar)

A chicken caudal homologue, CHox-cad, is expressed in the epiblast with posterior localization and in the early endodermal lineage.
Frumkin A, Rangini Z, Ben-Yehuda A, Gruenbaum Y, Fainsod A
Development (Cambridge, England)112(1)207-19(1991 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CDX1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CDX1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OGa00033	NM_204676.2 Latest version!	Gallus gallus caudal type homeobox 1 (CDX1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CDX1 ( NM_204676.2 ) cDNA ORF clone, Gallus gallus(chicken) -> NP_990007.2 Gallus gallus caudal type homeobox 1 (CDX1), mRNA.

Price & Availability↑

CloneID	OGa00033
Clone ID Related Accession (Same CDS sequence)	NM_204676.2
Accession Version	NM_204676.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 783bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1577376000000
Organism	Gallus gallus(chicken)
Product	homeobox protein CDX-1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADN05000072.1. On Aug 19, 2009 this sequence version replaced NM_204676.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: AB046532.1, HG313857.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2201360, SAMN03376183 [ECO:0000348] ##Evidence-Data-END##

ATGTATGTAG GCTATCTTTT GGATAAGGAC ACCAACATGT ATCCCAGTCC CGTCCGGCAT 
CCCAGCCTCA ACCTCAACCC CCAGAACTAC GTGCCGGGGC CACCCCAGTA CTCGGACTTC 
GCCAGCTACC ACCATGTGCC AGGGATTAAC AACGACCCTC ACCATGGGCA GCCCGCAGCC 
GCCTGGGGCT CACCCTACAC CCCTGCCAAG GAGGACTGGC ACTCATATGG CACCGCTGCC 
GCCTCCGCCG CCACCAACCC AGGGCAGTTT GGATTTAGCC CCCCGGATTT TAACCCCATG 
CAGCCCCATG CGGGCTCTGG ACTCCTGCCT CCAGCCATCA GCAGCTCGGT GCCACAGCTG 
TCCCCTAATG CACAGAGGCG CACCCCGTAC GAATGGATGA GGCGCAGTAT TCCCAGCACC 
AGCAGCAGCG GCAAGACGAG GACAAAGGAC AAGTACCGGG TGGTGTACAC GGACCACCAA 
CGCCTGGAGC TGGAGAAGGA ATTTCACTAC AGCCGCTACA TCACCATCCG CCGTAAGGCC 
GAGCTGGCTG CTGCCCTGGG GCTCACTGAA CGGCAGGTGA AAATCTGGTT TCAGAACCGG 
AGGGCGAAAG AGAGGAAGGT GAATAAAAAG AAGCTGCAGC AGCAGAGCCA GCCCACCAGC 
ACCACCACGC CAACCCCCCC AGCCGTGGGC ACGCCAGGGC CCATGGGGAC CCTCTGCAGT 
GGCAGTGCCC CAAGCCTTGT CTCCTCATCT CCGCTCACCA TCAAGGAGGA GTTCATGCCT 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_990007.2
CDS	85..867
Translation	MYVGYLLDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFASYHHVPGINNDPHHGQPAAAWGSPYTPAKEDWHSYGTAAASAATNPGQFGFSPPDFNPMQPHAGSGLLPPAISSSVPQLSPNAQRRTPYEWMRRSIPSTSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAVGTPGPMGTLCSGSAPSLVSSSPLTIKEEFMP

Target ORF information:

RefSeq Version	NM_204676.2
Organism	Gallus gallus(chicken)
Definition	Gallus gallus caudal type homeobox 1 (CDX1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_204676.2

ORF Insert Sequence:

ATGTATGTAG GCTATCTTTT GGATAAGGAC ACCAACATGT ATCCCAGTCC CGTCCGGCAT 
CCCAGCCTCA ACCTCAACCC CCAGAACTAC GTGCCGGGGC CACCCCAGTA CTCGGACTTC 
GCCAGCTACC ACCATGTGCC AGGGATTAAC AACGACCCTC ACCATGGGCA GCCCGCAGCC 
GCCTGGGGCT CACCCTACAC CCCTGCCAAG GAGGACTGGC ACTCATATGG CACCGCTGCC 
GCCTCCGCCG CCACCAACCC AGGGCAGTTT GGATTTAGCC CCCCGGATTT TAACCCCATG 
CAGCCCCATG CGGGCTCTGG ACTCCTGCCT CCAGCCATCA GCAGCTCGGT GCCACAGCTG 
TCCCCTAATG CACAGAGGCG CACCCCGTAC GAATGGATGA GGCGCAGTAT TCCCAGCACC 
AGCAGCAGCG GCAAGACGAG GACAAAGGAC AAGTACCGGG TGGTGTACAC GGACCACCAA 
CGCCTGGAGC TGGAGAAGGA ATTTCACTAC AGCCGCTACA TCACCATCCG CCGTAAGGCC 
GAGCTGGCTG CTGCCCTGGG GCTCACTGAA CGGCAGGTGA AAATCTGGTT TCAGAACCGG 
AGGGCGAAAG AGAGGAAGGT GAATAAAAAG AAGCTGCAGC AGCAGAGCCA GCCCACCAGC 
ACCACCACGC CAACCCCCCC AGCCGTGGGC ACGCCAGGGC CCATGGGGAC CCTCTGCAGT 
GGCAGTGCCC CAAGCCTTGT CTCCTCATCT CCGCTCACCA TCAAGGAGGA GTTCATGCCT 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Vertebrate caudal gene expression gradients investigated by use of chick cdx-A/lacZ and mouse cdx-1/lacZ reporters in transgenic mouse embryos: evidence for an intron enhancer.
Mechanisms of development120(5)573-86(2003 May)
Gaunt SJ,Drage D,Cockley A

Continued expression of the chicken caudal homologue in endodermally derived organs.
Developmental biology156(1)155-63(1993 Mar)
Doll U,Niessing J

A chicken caudal homologue, CHox-cad, is expressed in the epiblast with posterior localization and in the early endodermal lineage.
Development (Cambridge, England)112(1)207-19(1991 May)
Frumkin A,Rangini Z,Ben-Yehuda A,Gruenbaum Y,Fainsod A