| Gene Symbol | bub1b |
| Entrez Gene ID | 100820727 |
| Full Name | BUB1 mitotic checkpoint serine/threonine kinase B |
| Synonyms | bubr1 |
| Gene Type | protein-coding |
| Organism | Oryzias latipes(Japanese medaka) |
IVD Raw Materials
ORF » Species Summary » Oryzias latipes » bub1b cDNA ORF clone
| Gene Symbol | bub1b |
| Entrez Gene ID | 100820727 |
| Full Name | BUB1 mitotic checkpoint serine/threonine kinase B |
| Synonyms | bubr1 |
| Gene Type | protein-coding |
| Organism | Oryzias latipes(Japanese medaka) |
| mRNA | Protein | Name |
|---|---|---|
| XM_023951245.1 | XP_023807013.1 | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform X1 |
| NM_001374829.1 | NP_001361758.1 | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform 1 |
| XM_023951246.1 | XP_023807014.1 | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform X1 |
| NM_001252246.1 | NP_001239175.1 | mitotic checkpoint serine/threonine-protein kinase BUB1 beta |
| NM_001252246.2 | NP_001239175.2 | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform 2 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following bub1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the bub1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OJa113513 | |
| Clone ID Related Accession (Same CDS sequence) | XM_023951245.1 , NM_001374829.1 , XM_023951246.1 , NM_001252246.2 | |
| Accession Version | NM_001374829.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1571068800000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform 1 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CP020686.1. On Oct 16, 2019 this sequence version replaced XM_023951246.1. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIO01000288.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00029877, SAMD00029879 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001361758.1 |
| CDS | 112..1410 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001374829.1 |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa113513 | |
| Clone ID Related Accession (Same CDS sequence) | XM_023951245.1 , NM_001374829.1 , XM_023951246.1 , NM_001252246.2 | |
| Accession Version | NM_001252246.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1571068800000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform 2 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CP020686.1. On or before Oct 16, 2019 this sequence version replaced XM_023951245.1, NM_001252246.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00029877, SAMD00029878 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001239175.2 |
| CDS | 84..1382 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001252246.2 |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa20615 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001252246.1 | |
| Accession Version | NM_001252246.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1290bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1501948800000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | mitotic checkpoint serine/threonine-protein kinase BUB1 beta | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB574507.1. ##Evidence-Data-START## Transcript exon combination :: AB574507.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00029877, SAMD00029878 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001239175.1 |
| CDS | 76..1365 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001252246.1 |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa113513 | |
| Clone ID Related Accession (Same CDS sequence) | XM_023951245.1 , NM_001374829.1 , XM_023951246.1 , NM_001252246.2 | |
| Accession Version | XM_023951245.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1518537600000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019880.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_023807013.1 |
| CDS | 102..1400 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_023951245.1 |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OJa113513 | |
| Clone ID Related Accession (Same CDS sequence) | XM_023951245.1 , NM_001374829.1 , XM_023951246.1 , NM_001252246.2 | |
| Accession Version | XM_023951246.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1518537600000 | |
| Organism | Oryzias latipes(Japanese medaka) | |
| Product | mitotic checkpoint serine/threonine-protein kinase BUB1 beta isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019880.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_023807014.1 |
| CDS | 113..1411 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_023951246.1 |
1 | ATGGCGGAAG GTGGTGATGT GGAATGGGAG CTAAGCAAAG AAAACATTCA ACCACTAAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |