hspbap1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	hspbap1
Entrez Gene ID	445320
Full Name	hspb associated protein 1
Synonyms	zgc:100975
General protein information	Preferred Names hspb associated protein 1 Names HSPB1-associated protein 1 homolog
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_021478642.1	XP_021334317.1	HSPB1-associated protein 1 homolog isoform X2
XM_005167828.3	XP_005167885.1	HSPB1-associated protein 1 homolog isoform X1
NM_001003777.2	NP_001003777.1	HSPB1-associated protein 1 homolog
XM_005167828.4	XP_005167885.1	HSPB1-associated protein 1 homolog isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	HSPBAP1	NP_078886.2
Canis lupus familiaris (dog)	HSPBAP1	XP_535763.2
Mus musculus (house mouse)	Hspbap1	NP_780320.2
Gallus gallus (chicken)	HSPBAP1	XP_004942983.1
Bos taurus (cattle)	HSPBAP1	NP_001014911.1
Rattus norvegicus (Norway rat)	Hspbap1	NP_599246.2
Danio rerio (zebrafish)	hspbap1	NP_001003777.1
Pan troglodytes (chimpanzee)	HSPBAP1	XP_516696.2
Macaca mulatta (Rhesus monkey)	HSPBAP1	XP_001112802.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

B cells in teleost fish act as pivotal initiating APCs in priming adaptive immunity: an evolutionary perspective on the origin of the B-1 cell subset and B7 molecules.
Zhu LY, Lin AF, Shao T, Nie L, Dong WR, Xiang LX, Shao JZ
Journal of immunology (Baltimore, Md. : 1950)192(6)2699-714(2014 Mar)

High-affinity peptide transporter PEPT2 (SLC15A2) of the zebrafish Danio rerio: functional properties, genomic organization, and expression analysis.
Romano A, Kottra G, Barca A, Tiso N, Maffia M, Argenton F, Daniel H, Storelli C, Verri T
Physiological genomics24(3)207-17(2006 Feb)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following hspbap1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hspbap1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa00206	NM_001003777.2 Latest version!	Danio rerio hspb associated protein 1 (hspbap1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa15396	XM_005167828.4 Latest version!	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ODa15397	XM_021478642.1 Latest version!	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
View Old Accession Versions >>
ODa15396	XM_005167828.3	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

hspbap1 ( NM_001003777.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001003777.1 Danio rerio hspb associated protein 1 (hspbap1), mRNA.

Price & Availability↑

CloneID	ODa00206
Clone ID Related Accession (Same CDS sequence)	NM_001003777.2
Accession Version	NM_001003777.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1350bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	HSPB1-associated protein 1 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079489.1. On Aug 31, 2012 this sequence version replaced NM_001003777.1. ##Evidence-Data-START## Transcript exon combination :: BC079489.1, EH540277.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGTCCTCAA AACCTTTCAC ACCAGAAGAG GCGAGAAGAA TTGTCCAGGT TCTACAGAAA 
CCTGCTGTGT TTCTAAACAT GACCACAGAC TGGCCAGCTT TACACTGGAC TGTAGAGCAT 
CTGTCAGCCT GCCTTACAGA GAGGATACGA TTCCGGGTTG GGAAAAGAAG TGAGGATATG 
GCTCCTCTTT TTGAAACGGA ATGTTCCTAC GTCGAAGCAA CCATTAAAGA GTTTCTGTCC 
TGGACTGCTA ATGATGGTGA ACCATTAGTT GGGGCATTTT CGGATTATCA CTGCAAAGAA 
TTCTGGGCGT ATGCTGATTA CAAATACATT GCCCAGCTTT TTCAGGACAA ACCTGCCATG 
TTTCAGGATG TGGTGTGGTC TGACTTTGGC TTTCCTGGTC GAGATGGACG TGACAGCACA 
CTTTGGATTG GTACACAGTG TGCCAATACT CCATGTCACC TCGACTCTTA CGGTTGCAAT 
CTTGTGTTCC AGATTCAAGG CAGAAAACGA TGGCATCTCT TCCCTCCTGA TGACACAGCC 
TGTCTATACC CAACACGTGT ACCATATGAG GAGTCCAGCG TATTTAGTCA TGTCAATGTG 
ATTCGGCCTG ACCTGAAGAA GTTCCCAGCA TATGGACGAG CTCGGCTTTA CACCGTCACA 
CTGCAGCCTG GTCAGGTCCT GTTTGTGCCC AGACACTGGT GGCACTATGT GGAGTCAGTG 
GATCCAGTGA CCGTCAGTGT GAACTCCTGG ATTGAGATGG ACATGGATGA TGAGGCCAGA 
GTAGCAGAAG CCCTTACGAA GACCATTGTA TGTGCTGTGA AAAGCAGCCC GAGTCTAGAC 
AACAGCGACC AATGGCTCAA TCCTACTGAG GATGGAGTTT CTTCTCATGA TGAAAACATG 
CAGTATTTGA ACCTGGCGGT AAAGGCCTGT ATGAACAAGA AGAGAGACGA TATTGAAGAT 
CAGCCTAAAG CACAGGCTGT TAAACGTGAC TTCAGTGGAG TGTTAAAGAG TCCAGCGTCT 
CCTCCTTCCT TGGTTTCTTT CGGCCCTCAT CTCATTCCTG TTCATTTAAC TGAGAAACCT 
CAATGCAGCA GCACAAAGGA CTCATGTTGT TTCAGCTGCA CTGATTCCCC ACAGTGCCAG 
ATTACAACTA AAGATCAAGA CAAACTGAGA AGCGATAATA AACTTGGCCA AAGATCAGGT 
CAGTCTGTGC TTCAGGACAC AGGAAGTCCA GGAGGAAGTG GGGAAATGCA CATCTCCACC 
AATGATGTGC TGGAGTGCCT GGTTCACCCT GATGTCATCG CTCTGGTTAC AAGGCTAATC 
ATGTGCCGGC AAAGAGAACT TCACTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003777.1
CDS	87..1436
Translation	MSSKPFTPEEARRIVQVLQKPAVFLNMTTDWPALHWTVEHLSACLTERIRFRVGKRSEDMAPLFETECSYVEATIKEFLSWTANDGEPLVGAFSDYHCKEFWAYADYKYIAQLFQDKPAMFQDVVWSDFGFPGRDGRDSTLWIGTQCANTPCHLDSYGCNLVFQIQGRKRWHLFPPDDTACLYPTRVPYEESSVFSHVNVIRPDLKKFPAYGRARLYTVTLQPGQVLFVPRHWWHYVESVDPVTVSVNSWIEMDMDDEARVAEALTKTIVCAVKSSPSLDNSDQWLNPTEDGVSSHDENMQYLNLAVKACMNKKRDDIEDQPKAQAVKRDFSGVLKSPASPPSLVSFGPHLIPVHLTEKPQCSSTKDSCCFSCTDSPQCQITTKDQDKLRSDNKLGQRSGQSVLQDTGSPGGSGEMHISTNDVLECLVHPDVIALVTRLIMCRQRELHS

Target ORF information:

RefSeq Version	NM_001003777.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio hspb associated protein 1 (hspbap1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003777.2

ORF Insert Sequence:

ATGTCCTCAA AACCTTTCAC ACCAGAAGAG GCGAGAAGAA TTGTCCAGGT TCTACAGAAA 
CCTGCTGTGT TTCTAAACAT GACCACAGAC TGGCCAGCTT TACACTGGAC TGTAGAGCAT 
CTGTCAGCCT GCCTTACAGA GAGGATACGA TTCCGGGTTG GGAAAAGAAG TGAGGATATG 
GCTCCTCTTT TTGAAACGGA ATGTTCCTAC GTCGAAGCAA CCATTAAAGA GTTTCTGTCC 
TGGACTGCTA ATGATGGTGA ACCATTAGTT GGGGCATTTT CGGATTATCA CTGCAAAGAA 
TTCTGGGCGT ATGCTGATTA CAAATACATT GCCCAGCTTT TTCAGGACAA ACCTGCCATG 
TTTCAGGATG TGGTGTGGTC TGACTTTGGC TTTCCTGGTC GAGATGGACG TGACAGCACA 
CTTTGGATTG GTACACAGTG TGCCAATACT CCATGTCACC TCGACTCTTA CGGTTGCAAT 
CTTGTGTTCC AGATTCAAGG CAGAAAACGA TGGCATCTCT TCCCTCCTGA TGACACAGCC 
TGTCTATACC CAACACGTGT ACCATATGAG GAGTCCAGCG TATTTAGTCA TGTCAATGTG 
ATTCGGCCTG ACCTGAAGAA GTTCCCAGCA TATGGACGAG CTCGGCTTTA CACCGTCACA 
CTGCAGCCTG GTCAGGTCCT GTTTGTGCCC AGACACTGGT GGCACTATGT GGAGTCAGTG 
GATCCAGTGA CCGTCAGTGT GAACTCCTGG ATTGAGATGG ACATGGATGA TGAGGCCAGA 
GTAGCAGAAG CCCTTACGAA GACCATTGTA TGTGCTGTGA AAAGCAGCCC GAGTCTAGAC 
AACAGCGACC AATGGCTCAA TCCTACTGAG GATGGAGTTT CTTCTCATGA TGAAAACATG 
CAGTATTTGA ACCTGGCGGT AAAGGCCTGT ATGAACAAGA AGAGAGACGA TATTGAAGAT 
CAGCCTAAAG CACAGGCTGT TAAACGTGAC TTCAGTGGAG TGTTAAAGAG TCCAGCGTCT 
CCTCCTTCCT TGGTTTCTTT CGGCCCTCAT CTCATTCCTG TTCATTTAAC TGAGAAACCT 
CAATGCAGCA GCACAAAGGA CTCATGTTGT TTCAGCTGCA CTGATTCCCC ACAGTGCCAG 
ATTACAACTA AAGATCAAGA CAAACTGAGA AGCGATAATA AACTTGGCCA AAGATCAGGT 
CAGTCTGTGC TTCAGGACAC AGGAAGTCCA GGAGGAAGTG GGGAAATGCA CATCTCCACC 
AATGATGTGC TGGAGTGCCT GGTTCACCCT GATGTCATCG CTCTGGTTAC AAGGCTAATC 
ATGTGCCGGC AAAGAGAACT TCACTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hspbap1 ( XM_005167828.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167885.1 Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa15396
Clone ID Related Accession (Same CDS sequence)	XM_005167828.3 , XM_005167828.4
Accession Version	XM_005167828.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	HSPB1-associated protein 1 homolog isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005167828.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGTGTGA ATGCAAAAAT AATGTCCTCA AAACCTTTCA CACCAGAAGA GGCGAGAAGA 
ATTGTCCAGG TTCTACAGAA ACCTGCTGTG TTTCTAAACA TGACCACAGA CTGGCCAGCT 
TTACACTGGA CTGTAGAGCA TCTGTCAGCC TGCCTTACAA AGAGGATACG ATTCCGGGTT 
GGGAAAAGAA GTGAGGATAT GGCTCCTCTT TTTGAAACGG AGTGTTCCTA CGTCGAAGCA 
ACCATTAAAG AGTTTCTGTC CTGGACTGCT AATGATGGTG AACCATTAGT TGGGCCATTT 
TTGGATTATC ACTGCAAAGA ATTCTGGGCT TATGCTGATT ACAAATACAT TGCCCAGCTT 
TTTCAGGACA AACCTGCCAT GTTTCAGGAT GTGGTGTGGT CTGACTTTGG CTTTCCTGGT 
CGAGATGGAC GTGACAGCAC ACTTTGGATT GGTACACAGT GTGCCAATAC TCCATGTCAC 
CTCGACTCTT ACGGTTGCAA TCTTGTGTTC CAGATTCAAG GCAGAAAACG ATGGCATCTC 
TTCCCTCCTG ATGACACAGC CTGTCTATAC CCAACACGTG TACCATATGA GGAGTCCAGC 
GTATTTAGTC ATGTCAATGT GATTCGGCCT GACCTGAAGA AGTTCCCAGC ATATGGACGA 
GCTCGGCTTT ACACCGTCAC ACTGCAGCCT GGTCAGGTCC TGTTTGTGCC CAGACACTGG 
TGGCACTATG TGGAGTCAGT GGATCCAGTG ACTGTCAGTG TGAACTCCTG GATTGAGATG 
GACATGGATG ATGAGGCCAG AGTAGCAGAA GCCCTTACGA AGACCATTGT ATGTGCTGTG 
AAAAGCAGCC CGAGTCTAGA CAACAGCGAC CAATGGCTCA ATCCTACTGA GGATGGAGTT 
TCTTCTCATG ATGAAAACAT GCAGTATTTG AACCTGGCAG TAAAGGTCTG TATGAACAAG 
AAGAGAGACG ATATTGAAGA TCAGCCTAAA GCAGAGGCTG TAAAACGTGA CTTCAGTGGA 
GTGTTAAAGA GTCCAGCGTC TCCTCCTTCC TTGGTTTCTT TCGGCCCTCA TCTCATTCCT 
GTTCATTTAA CTGAGAAACC TCAATGCAGC AGCACAAAGG ACTCATGTTG TTTCAGCTGC 
ACTGATTCCC CACAGTGCCA GATTACAACT AAAGATCAAG ACAAACTGAG AAGCGATAAT 
AAACTTGGCC AAAGATCAGG TCAGTCTGTG CTTCAGGACA CAGAAAATCC AGGAGGAAGT 
GGTGAAATGC ACATCTCCAC CAATGATGTG CTGGAGTGCC TGGTTCACCC TGATGTCATC 
GCTCTGGTTA CAAGGCTAAT CATGTGCCGG CAAAGAGAAC TTCACTCTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167885.1
CDS	47..1417
Translation	MCVNAKIMSSKPFTPEEARRIVQVLQKPAVFLNMTTDWPALHWTVEHLSACLTKRIRFRVGKRSEDMAPLFETECSYVEATIKEFLSWTANDGEPLVGPFLDYHCKEFWAYADYKYIAQLFQDKPAMFQDVVWSDFGFPGRDGRDSTLWIGTQCANTPCHLDSYGCNLVFQIQGRKRWHLFPPDDTACLYPTRVPYEESSVFSHVNVIRPDLKKFPAYGRARLYTVTLQPGQVLFVPRHWWHYVESVDPVTVSVNSWIEMDMDDEARVAEALTKTIVCAVKSSPSLDNSDQWLNPTEDGVSSHDENMQYLNLAVKVCMNKKRDDIEDQPKAEAVKRDFSGVLKSPASPPSLVSFGPHLIPVHLTEKPQCSSTKDSCCFSCTDSPQCQITTKDQDKLRSDNKLGQRSGQSVLQDTENPGGSGEMHISTNDVLECLVHPDVIALVTRLIMCRQRELHS

Target ORF information:

RefSeq Version	XM_005167828.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167828.3

ORF Insert Sequence:

ATGTGTGTGA ATGCAAAAAT AATGTCCTCA AAACCTTTCA CACCAGAAGA GGCGAGAAGA 
ATTGTCCAGG TTCTACAGAA ACCTGCTGTG TTTCTAAACA TGACCACAGA CTGGCCAGCT 
TTACACTGGA CTGTAGAGCA TCTGTCAGCC TGCCTTACAA AGAGGATACG ATTCCGGGTT 
GGGAAAAGAA GTGAGGATAT GGCTCCTCTT TTTGAAACGG AGTGTTCCTA CGTCGAAGCA 
ACCATTAAAG AGTTTCTGTC CTGGACTGCT AATGATGGTG AACCATTAGT TGGGCCATTT 
TTGGATTATC ACTGCAAAGA ATTCTGGGCT TATGCTGATT ACAAATACAT TGCCCAGCTT 
TTTCAGGACA AACCTGCCAT GTTTCAGGAT GTGGTGTGGT CTGACTTTGG CTTTCCTGGT 
CGAGATGGAC GTGACAGCAC ACTTTGGATT GGTACACAGT GTGCCAATAC TCCATGTCAC 
CTCGACTCTT ACGGTTGCAA TCTTGTGTTC CAGATTCAAG GCAGAAAACG ATGGCATCTC 
TTCCCTCCTG ATGACACAGC CTGTCTATAC CCAACACGTG TACCATATGA GGAGTCCAGC 
GTATTTAGTC ATGTCAATGT GATTCGGCCT GACCTGAAGA AGTTCCCAGC ATATGGACGA 
GCTCGGCTTT ACACCGTCAC ACTGCAGCCT GGTCAGGTCC TGTTTGTGCC CAGACACTGG 
TGGCACTATG TGGAGTCAGT GGATCCAGTG ACTGTCAGTG TGAACTCCTG GATTGAGATG 
GACATGGATG ATGAGGCCAG AGTAGCAGAA GCCCTTACGA AGACCATTGT ATGTGCTGTG 
AAAAGCAGCC CGAGTCTAGA CAACAGCGAC CAATGGCTCA ATCCTACTGA GGATGGAGTT 
TCTTCTCATG ATGAAAACAT GCAGTATTTG AACCTGGCAG TAAAGGTCTG TATGAACAAG 
AAGAGAGACG ATATTGAAGA TCAGCCTAAA GCAGAGGCTG TAAAACGTGA CTTCAGTGGA 
GTGTTAAAGA GTCCAGCGTC TCCTCCTTCC TTGGTTTCTT TCGGCCCTCA TCTCATTCCT 
GTTCATTTAA CTGAGAAACC TCAATGCAGC AGCACAAAGG ACTCATGTTG TTTCAGCTGC 
ACTGATTCCC CACAGTGCCA GATTACAACT AAAGATCAAG ACAAACTGAG AAGCGATAAT 
AAACTTGGCC AAAGATCAGG TCAGTCTGTG CTTCAGGACA CAGAAAATCC AGGAGGAAGT 
GGTGAAATGC ACATCTCCAC CAATGATGTG CTGGAGTGCC TGGTTCACCC TGATGTCATC 
GCTCTGGTTA CAAGGCTAAT CATGTGCCGG CAAAGAGAAC TTCACTCTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hspbap1 ( XM_005167828.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005167885.1 Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa15396
Clone ID Related Accession (Same CDS sequence)	XM_005167828.3 , XM_005167828.4
Accession Version	XM_005167828.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1371bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	HSPB1-associated protein 1 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005167828.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGTGTGA ATGCAAAAAT AATGTCCTCA AAACCTTTCA CACCAGAAGA GGCGAGAAGA 
ATTGTCCAGG TTCTACAGAA ACCTGCTGTG TTTCTAAACA TGACCACAGA CTGGCCAGCT 
TTACACTGGA CTGTAGAGCA TCTGTCAGCC TGCCTTACAA AGAGGATACG ATTCCGGGTT 
GGGAAAAGAA GTGAGGATAT GGCTCCTCTT TTTGAAACGG AGTGTTCCTA CGTCGAAGCA 
ACCATTAAAG AGTTTCTGTC CTGGACTGCT AATGATGGTG AACCATTAGT TGGGCCATTT 
TTGGATTATC ACTGCAAAGA ATTCTGGGCT TATGCTGATT ACAAATACAT TGCCCAGCTT 
TTTCAGGACA AACCTGCCAT GTTTCAGGAT GTGGTGTGGT CTGACTTTGG CTTTCCTGGT 
CGAGATGGAC GTGACAGCAC ACTTTGGATT GGTACACAGT GTGCCAATAC TCCATGTCAC 
CTCGACTCTT ACGGTTGCAA TCTTGTGTTC CAGATTCAAG GCAGAAAACG ATGGCATCTC 
TTCCCTCCTG ATGACACAGC CTGTCTATAC CCAACACGTG TACCATATGA GGAGTCCAGC 
GTATTTAGTC ATGTCAATGT GATTCGGCCT GACCTGAAGA AGTTCCCAGC ATATGGACGA 
GCTCGGCTTT ACACCGTCAC ACTGCAGCCT GGTCAGGTCC TGTTTGTGCC CAGACACTGG 
TGGCACTATG TGGAGTCAGT GGATCCAGTG ACTGTCAGTG TGAACTCCTG GATTGAGATG 
GACATGGATG ATGAGGCCAG AGTAGCAGAA GCCCTTACGA AGACCATTGT ATGTGCTGTG 
AAAAGCAGCC CGAGTCTAGA CAACAGCGAC CAATGGCTCA ATCCTACTGA GGATGGAGTT 
TCTTCTCATG ATGAAAACAT GCAGTATTTG AACCTGGCAG TAAAGGTCTG TATGAACAAG 
AAGAGAGACG ATATTGAAGA TCAGCCTAAA GCAGAGGCTG TAAAACGTGA CTTCAGTGGA 
GTGTTAAAGA GTCCAGCGTC TCCTCCTTCC TTGGTTTCTT TCGGCCCTCA TCTCATTCCT 
GTTCATTTAA CTGAGAAACC TCAATGCAGC AGCACAAAGG ACTCATGTTG TTTCAGCTGC 
ACTGATTCCC CACAGTGCCA GATTACAACT AAAGATCAAG ACAAACTGAG AAGCGATAAT 
AAACTTGGCC AAAGATCAGG TCAGTCTGTG CTTCAGGACA CAGAAAATCC AGGAGGAAGT 
GGTGAAATGC ACATCTCCAC CAATGATGTG CTGGAGTGCC TGGTTCACCC TGATGTCATC 
GCTCTGGTTA CAAGGCTAAT CATGTGCCGG CAAAGAGAAC TTCACTCTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005167885.1
CDS	47..1417
Translation	MCVNAKIMSSKPFTPEEARRIVQVLQKPAVFLNMTTDWPALHWTVEHLSACLTKRIRFRVGKRSEDMAPLFETECSYVEATIKEFLSWTANDGEPLVGPFLDYHCKEFWAYADYKYIAQLFQDKPAMFQDVVWSDFGFPGRDGRDSTLWIGTQCANTPCHLDSYGCNLVFQIQGRKRWHLFPPDDTACLYPTRVPYEESSVFSHVNVIRPDLKKFPAYGRARLYTVTLQPGQVLFVPRHWWHYVESVDPVTVSVNSWIEMDMDDEARVAEALTKTIVCAVKSSPSLDNSDQWLNPTEDGVSSHDENMQYLNLAVKVCMNKKRDDIEDQPKAEAVKRDFSGVLKSPASPPSLVSFGPHLIPVHLTEKPQCSSTKDSCCFSCTDSPQCQITTKDQDKLRSDNKLGQRSGQSVLQDTENPGGSGEMHISTNDVLECLVHPDVIALVTRLIMCRQRELHS

Target ORF information:

RefSeq Version	XM_005167828.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005167828.4

ORF Insert Sequence:

ATGTGTGTGA ATGCAAAAAT AATGTCCTCA AAACCTTTCA CACCAGAAGA GGCGAGAAGA 
ATTGTCCAGG TTCTACAGAA ACCTGCTGTG TTTCTAAACA TGACCACAGA CTGGCCAGCT 
TTACACTGGA CTGTAGAGCA TCTGTCAGCC TGCCTTACAA AGAGGATACG ATTCCGGGTT 
GGGAAAAGAA GTGAGGATAT GGCTCCTCTT TTTGAAACGG AGTGTTCCTA CGTCGAAGCA 
ACCATTAAAG AGTTTCTGTC CTGGACTGCT AATGATGGTG AACCATTAGT TGGGCCATTT 
TTGGATTATC ACTGCAAAGA ATTCTGGGCT TATGCTGATT ACAAATACAT TGCCCAGCTT 
TTTCAGGACA AACCTGCCAT GTTTCAGGAT GTGGTGTGGT CTGACTTTGG CTTTCCTGGT 
CGAGATGGAC GTGACAGCAC ACTTTGGATT GGTACACAGT GTGCCAATAC TCCATGTCAC 
CTCGACTCTT ACGGTTGCAA TCTTGTGTTC CAGATTCAAG GCAGAAAACG ATGGCATCTC 
TTCCCTCCTG ATGACACAGC CTGTCTATAC CCAACACGTG TACCATATGA GGAGTCCAGC 
GTATTTAGTC ATGTCAATGT GATTCGGCCT GACCTGAAGA AGTTCCCAGC ATATGGACGA 
GCTCGGCTTT ACACCGTCAC ACTGCAGCCT GGTCAGGTCC TGTTTGTGCC CAGACACTGG 
TGGCACTATG TGGAGTCAGT GGATCCAGTG ACTGTCAGTG TGAACTCCTG GATTGAGATG 
GACATGGATG ATGAGGCCAG AGTAGCAGAA GCCCTTACGA AGACCATTGT ATGTGCTGTG 
AAAAGCAGCC CGAGTCTAGA CAACAGCGAC CAATGGCTCA ATCCTACTGA GGATGGAGTT 
TCTTCTCATG ATGAAAACAT GCAGTATTTG AACCTGGCAG TAAAGGTCTG TATGAACAAG 
AAGAGAGACG ATATTGAAGA TCAGCCTAAA GCAGAGGCTG TAAAACGTGA CTTCAGTGGA 
GTGTTAAAGA GTCCAGCGTC TCCTCCTTCC TTGGTTTCTT TCGGCCCTCA TCTCATTCCT 
GTTCATTTAA CTGAGAAACC TCAATGCAGC AGCACAAAGG ACTCATGTTG TTTCAGCTGC 
ACTGATTCCC CACAGTGCCA GATTACAACT AAAGATCAAG ACAAACTGAG AAGCGATAAT 
AAACTTGGCC AAAGATCAGG TCAGTCTGTG CTTCAGGACA CAGAAAATCC AGGAGGAAGT 
GGTGAAATGC ACATCTCCAC CAATGATGTG CTGGAGTGCC TGGTTCACCC TGATGTCATC 
GCTCTGGTTA CAAGGCTAAT CATGTGCCGG CAAAGAGAAC TTCACTCTTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

hspbap1 ( XM_021478642.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021334317.1 Danio rerio hspb associated protein 1 (hspbap1), transcript variant X2, mRNA.

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CloneID	ODa15397
Clone ID Related Accession (Same CDS sequence)	XM_021478642.1
Accession Version	XM_021478642.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1350bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	HSPB1-associated protein 1 homolog isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007120.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTCCTCAA AACCTTTCAC ACCAGAAGAG GCGAGAAGAA TTGTCCAGGT TCTACAGAAA 
CCTGCTGTGT TTCTAAACAT GACCACAGAC TGGCCAGCTT TACACTGGAC TGTAGAGCAT 
CTGTCAGCCT GCCTTACAAA GAGGATACGA TTCCGGGTTG GGAAAAGAAG TGAGGATATG 
GCTCCTCTTT TTGAAACGGA GTGTTCCTAC GTCGAAGCAA CCATTAAAGA GTTTCTGTCC 
TGGACTGCTA ATGATGGTGA ACCATTAGTT GGGCCATTTT TGGATTATCA CTGCAAAGAA 
TTCTGGGCTT ATGCTGATTA CAAATACATT GCCCAGCTTT TTCAGGACAA ACCTGCCATG 
TTTCAGGATG TGGTGTGGTC TGACTTTGGC TTTCCTGGTC GAGATGGACG TGACAGCACA 
CTTTGGATTG GTACACAGTG TGCCAATACT CCATGTCACC TCGACTCTTA CGGTTGCAAT 
CTTGTGTTCC AGATTCAAGG CAGAAAACGA TGGCATCTCT TCCCTCCTGA TGACACAGCC 
TGTCTATACC CAACACGTGT ACCATATGAG GAGTCCAGCG TATTTAGTCA TGTCAATGTG 
ATTCGGCCTG ACCTGAAGAA GTTCCCAGCA TATGGACGAG CTCGGCTTTA CACCGTCACA 
CTGCAGCCTG GTCAGGTCCT GTTTGTGCCC AGACACTGGT GGCACTATGT GGAGTCAGTG 
GATCCAGTGA CTGTCAGTGT GAACTCCTGG ATTGAGATGG ACATGGATGA TGAGGCCAGA 
GTAGCAGAAG CCCTTACGAA GACCATTGTA TGTGCTGTGA AAAGCAGCCC GAGTCTAGAC 
AACAGCGACC AATGGCTCAA TCCTACTGAG GATGGAGTTT CTTCTCATGA TGAAAACATG 
CAGTATTTGA ACCTGGCAGT AAAGGTCTGT ATGAACAAGA AGAGAGACGA TATTGAAGAT 
CAGCCTAAAG CAGAGGCTGT AAAACGTGAC TTCAGTGGAG TGTTAAAGAG TCCAGCGTCT 
CCTCCTTCCT TGGTTTCTTT CGGCCCTCAT CTCATTCCTG TTCATTTAAC TGAGAAACCT 
CAATGCAGCA GCACAAAGGA CTCATGTTGT TTCAGCTGCA CTGATTCCCC ACAGTGCCAG 
ATTACAACTA AAGATCAAGA CAAACTGAGA AGCGATAATA AACTTGGCCA AAGATCAGGT 
CAGTCTGTGC TTCAGGACAC AGAAAATCCA GGAGGAAGTG GTGAAATGCA CATCTCCACC 
AATGATGTGC TGGAGTGCCT GGTTCACCCT GATGTCATCG CTCTGGTTAC AAGGCTAATC 
ATGTGCCGGC AAAGAGAACT TCACTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021334317.1
CDS	41..1390
Translation	MSSKPFTPEEARRIVQVLQKPAVFLNMTTDWPALHWTVEHLSACLTKRIRFRVGKRSEDMAPLFETECSYVEATIKEFLSWTANDGEPLVGPFLDYHCKEFWAYADYKYIAQLFQDKPAMFQDVVWSDFGFPGRDGRDSTLWIGTQCANTPCHLDSYGCNLVFQIQGRKRWHLFPPDDTACLYPTRVPYEESSVFSHVNVIRPDLKKFPAYGRARLYTVTLQPGQVLFVPRHWWHYVESVDPVTVSVNSWIEMDMDDEARVAEALTKTIVCAVKSSPSLDNSDQWLNPTEDGVSSHDENMQYLNLAVKVCMNKKRDDIEDQPKAEAVKRDFSGVLKSPASPPSLVSFGPHLIPVHLTEKPQCSSTKDSCCFSCTDSPQCQITTKDQDKLRSDNKLGQRSGQSVLQDTENPGGSGEMHISTNDVLECLVHPDVIALVTRLIMCRQRELHS

Target ORF information:

RefSeq Version	XM_021478642.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio hspb associated protein 1 (hspbap1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021478642.1

ORF Insert Sequence:

ATGTCCTCAA AACCTTTCAC ACCAGAAGAG GCGAGAAGAA TTGTCCAGGT TCTACAGAAA 
CCTGCTGTGT TTCTAAACAT GACCACAGAC TGGCCAGCTT TACACTGGAC TGTAGAGCAT 
CTGTCAGCCT GCCTTACAAA GAGGATACGA TTCCGGGTTG GGAAAAGAAG TGAGGATATG 
GCTCCTCTTT TTGAAACGGA GTGTTCCTAC GTCGAAGCAA CCATTAAAGA GTTTCTGTCC 
TGGACTGCTA ATGATGGTGA ACCATTAGTT GGGCCATTTT TGGATTATCA CTGCAAAGAA 
TTCTGGGCTT ATGCTGATTA CAAATACATT GCCCAGCTTT TTCAGGACAA ACCTGCCATG 
TTTCAGGATG TGGTGTGGTC TGACTTTGGC TTTCCTGGTC GAGATGGACG TGACAGCACA 
CTTTGGATTG GTACACAGTG TGCCAATACT CCATGTCACC TCGACTCTTA CGGTTGCAAT 
CTTGTGTTCC AGATTCAAGG CAGAAAACGA TGGCATCTCT TCCCTCCTGA TGACACAGCC 
TGTCTATACC CAACACGTGT ACCATATGAG GAGTCCAGCG TATTTAGTCA TGTCAATGTG 
ATTCGGCCTG ACCTGAAGAA GTTCCCAGCA TATGGACGAG CTCGGCTTTA CACCGTCACA 
CTGCAGCCTG GTCAGGTCCT GTTTGTGCCC AGACACTGGT GGCACTATGT GGAGTCAGTG 
GATCCAGTGA CTGTCAGTGT GAACTCCTGG ATTGAGATGG ACATGGATGA TGAGGCCAGA 
GTAGCAGAAG CCCTTACGAA GACCATTGTA TGTGCTGTGA AAAGCAGCCC GAGTCTAGAC 
AACAGCGACC AATGGCTCAA TCCTACTGAG GATGGAGTTT CTTCTCATGA TGAAAACATG 
CAGTATTTGA ACCTGGCAGT AAAGGTCTGT ATGAACAAGA AGAGAGACGA TATTGAAGAT 
CAGCCTAAAG CAGAGGCTGT AAAACGTGAC TTCAGTGGAG TGTTAAAGAG TCCAGCGTCT 
CCTCCTTCCT TGGTTTCTTT CGGCCCTCAT CTCATTCCTG TTCATTTAAC TGAGAAACCT 
CAATGCAGCA GCACAAAGGA CTCATGTTGT TTCAGCTGCA CTGATTCCCC ACAGTGCCAG 
ATTACAACTA AAGATCAAGA CAAACTGAGA AGCGATAATA AACTTGGCCA AAGATCAGGT 
CAGTCTGTGC TTCAGGACAC AGAAAATCCA GGAGGAAGTG GTGAAATGCA CATCTCCACC 
AATGATGTGC TGGAGTGCCT GGTTCACCCT GATGTCATCG CTCTGGTTAC AAGGCTAATC 
ATGTGCCGGC AAAGAGAACT TCACTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

B cells in teleost fish act as pivotal initiating APCs in priming adaptive immunity: an evolutionary perspective on the origin of the B-1 cell subset and B7 molecules.
Journal of immunology (Baltimore, Md. : 1950)192(6)2699-714(2014 Mar)
Zhu LY,Lin AF,Shao T,Nie L,Dong WR,Xiang LX,Shao JZ

High-affinity peptide transporter PEPT2 (SLC15A2) of the zebrafish Danio rerio: functional properties, genomic organization, and expression analysis.
Physiological genomics24(3)207-17(2006 Feb)
Romano A,Kottra G,Barca A,Tiso N,Maffia M,Argenton F,Daniel H,Storelli C,Verri T

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hspbap1 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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