LOC6555123 cDNA ORF clone, Drosophila erecta

The following LOC6555123 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6555123 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODi32321 XM_001981106.2
Latest version!
Drosophila erecta uncharacterized protein, transcript variant B (Dere\GG11906), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
ODi32854 XM_015153669.2
Latest version!
Drosophila erecta mediator of RNA polymerase II transcription subunit 15 (LOC6555123), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
ODi10870 XM_026983713.1
Latest version!
Drosophila erecta mediator of RNA polymerase II transcription subunit 15 (LOC6555123), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
ODi32854 XM_015153669.1 Drosophila erecta uncharacterized protein, transcript variant C (Dere\GG11906), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODi32321
    Clone ID Related Accession (Same CDS sequence) XM_001981106.2
    Accession Version XM_001981106.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1101bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein, isoform B
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956553). On Dec 21, 2015 this sequence version replaced XM_001981106.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    GTGAGAAGAT TATTGACAGC CGGAACGGCT AGTCGCAGAG TCAACAAAGC CAGCAGCAGC
    GGCGGCAGGA GTCATTGCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001981142.2
    CDS269..1369
    Translation

    Target ORF information:

    RefSeq Version XM_001981106.2
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein, transcript variant B (Dere\GG11906), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_001981106.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    GTGAGAAGAT TATTGACAGC CGGAACGGCT AGTCGCAGAG TCAACAAAGC CAGCAGCAGC
    GGCGGCAGGA GTCATTGCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi32854
    Clone ID Related Accession (Same CDS sequence) XM_015153669.1 , XM_015153669.2
    Accession Version XM_015153669.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1026bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein, isoform C
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956553). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015009155.1
    CDS266..1291
    Translation

    Target ORF information:

    RefSeq Version XM_015153669.1
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein, transcript variant C (Dere\GG11906), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015153669.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi32854
    Clone ID Related Accession (Same CDS sequence) XM_015153669.1 , XM_015153669.2
    Accession Version XM_015153669.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1026bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product mediator of RNA polymerase II transcription subunit 15 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825194.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 6, 2018 this sequence version replaced XM_015153669.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015009155.1
    CDS581..1606
    Translation

    Target ORF information:

    RefSeq Version XM_015153669.2
    Organism Drosophila erecta
    Definition Drosophila erecta mediator of RNA polymerase II transcription subunit 15 (LOC6555123), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_015153669.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    TATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODi10870
    Clone ID Related Accession (Same CDS sequence) XM_026983713.1
    Accession Version XM_026983713.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1788bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product transcription factor SPT20 homolog isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825194.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    CCGGAACGGC TAGTCGCAGA GTCAACAAAG CCAGCAGCAG CGGCGGCAGG AGTCATTGCT
    AAGACCACCA CCAGCAACAA CAGTCGCAAC TACCAAATGG ATGCTAATCA AAACCAAATT
    CAGATGGAGG CCCAGGCACG AAAGCAGAAG ATAATCATTC AAAACCAGAT GATACTCAAT
    GCCAGCCACC AGCAGCAGCA GCAGCACCAG CAGCAACAGC AGCAGCAGCC GCAGCAACAT
    CCGCAACAGC AGCAGCACCA ACAGCAACAG CAGCAGCAGC AGCAACACGT GGCCCACGGA
    AAGAAGGCAG CCAGAAAACA CCAGCAACAT CTGCAGCAAC AGCAGCAGCA GCAACAGCAG
    CAGCAGCAGC AGCAGCAACA GACCAGTGCG CCAATGTACA ATAACAATAG TAGTAGCAAC
    CACAACGGCA ACAACCAAAG CCAAGAAGTG TCGGTGCCGG TGTCGCACAT CATTGCCAAT
    TCGCCGACGG CCGCCACCTA CATGCAGGCC CAGCTGAGCG AGCACGCCAG CAACATGCAG
    CACGGCATGC CCATTGTCAC GTACAATGGG AACCAGTACT GCGTGATCAC CCGGGCCCCG
    GATCTGGATG TGGAGGCGAT GCAGAAGCCC CTGGACTATG GCCACGCAGC CGGAGGAGCC
    ACCAACATAA TAGTGATGTC GCCGATGCAA CTGCTGCCTC CGCAGCAGCA GCAGCAGCCG
    CAGCAGCAGC AGCAGCAGCC GCAACCGCAG CAGCAACAGC AGCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026839514.1
    CDS589..2376
    Translation

    Target ORF information:

    RefSeq Version XM_026983713.1
    Organism Drosophila erecta
    Definition Drosophila erecta mediator of RNA polymerase II transcription subunit 15 (LOC6555123), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_026983713.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGATAAGA TGACGGTTGC CCAGAAGAAC GCATATCTCG AGGCGCACAT GGCGGTGCAG 
    CAGCAGATGG CCCAGGCGGC CATCCAGTTC AAGCAGCAGC AGACGTCCCA GCAACAGAAC
    TCCCCCACGG CCAACAACAA CAACAACAGC CAGAACAACG GCAACATGCA GCAGCAGCAA
    CAGCAGCAGC AGCAGCAACA GCAGCAGCAA CAGCAGCAGC AACAACAGCA GCAGCAGCAG
    CACTATGCGG CAACCATCAA GGTGCCGCAG ATCAGTTCCT CCAGTGTGGC AGCTGCGGCG
    GCGGGGGAGA GCACCTTCAC AGTTCCGGAC GACGGAATGG GATTCGAGGG CGGCGTGCGG
    GTGCTGCAGA GCCTGGGAAC CTGGTCGGCG GCCGAGCAAC TGACCTACAA CATACCCAAG
    CCCAACCTCA TACCCTTCAC AGAGCCCTAT GTCGAGGGGG GCTCCATGCA CCCCGCCAGT
    CGACTCAAGG CCCTGCAACA GGTGCAACAG GCGTCCTCGG GGGTGCGCAA GACAAATCCC
    TCAAAGTCCA CCAACAAGGC GTTCGAGTGC ACGGTCTGCG GCAAAGGACT CGCCCGCAAG
    GACAAGCTGA CCATCCACAT GCGCATCCAC ACCGGCGAGA AGCCCTATAT TTGTGAAGTG
    TGCAATAAGG CGTTCGCAAG GCGGGACAAG CTGGTGATCC ACATGAACAA GTTCAAGCAC
    GTGACGCCGA CGAACATTGC GCCACTCGGA AAGCGATTGA ACAACATGGT GAAGAAGAAG
    GAGCAGCCGG ATCCGCCGCC GGAGGACAAC AAGCAGAGCC TGGAGCTGCA GCTGCAGCAG
    CAGGCCGTCC AGGTGGCCGC CCAGAACATA ATAGTGCAAT CCGCTCAGGG AGCGCCGACG
    TCGATTCCCG GTATCATCAT ACCGCACCAT CAGCAGCAGT TGTCCTGGAC GTGCGAGCTG
    TGCGGCAGGA TGTTCTCGAG TCGGGACGAG TGGTCCATTC ACGCCAAGAG TCATCTGGAG
    CCGGAACGGC TAGTCGCAGA GTCAACAAAG CCAGCAGCAG CGGCGGCAGG AGTCATTGCT
    AAGACCACCA CCAGCAACAA CAGTCGCAAC TACCAAATGG ATGCTAATCA AAACCAAATT
    CAGATGGAGG CCCAGGCACG AAAGCAGAAG ATAATCATTC AAAACCAGAT GATACTCAAT
    GCCAGCCACC AGCAGCAGCA GCAGCACCAG CAGCAACAGC AGCAGCAGCC GCAGCAACAT
    CCGCAACAGC AGCAGCACCA ACAGCAACAG CAGCAGCAGC AGCAACACGT GGCCCACGGA
    AAGAAGGCAG CCAGAAAACA CCAGCAACAT CTGCAGCAAC AGCAGCAGCA GCAACAGCAG
    CAGCAGCAGC AGCAGCAACA GACCAGTGCG CCAATGTACA ATAACAATAG TAGTAGCAAC
    CACAACGGCA ACAACCAAAG CCAAGAAGTG TCGGTGCCGG TGTCGCACAT CATTGCCAAT
    TCGCCGACGG CCGCCACCTA CATGCAGGCC CAGCTGAGCG AGCACGCCAG CAACATGCAG
    CACGGCATGC CCATTGTCAC GTACAATGGG AACCAGTACT GCGTGATCAC CCGGGCCCCG
    GATCTGGATG TGGAGGCGAT GCAGAAGCCC CTGGACTATG GCCACGCAGC CGGAGGAGCC
    ACCAACATAA TAGTGATGTC GCCGATGCAA CTGCTGCCTC CGCAGCAGCA GCAGCAGCCG
    CAGCAGCAGC AGCAGCAGCC GCAACCGCAG CAGCAACAGC AGCAGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Assembly reconciliation.
    Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
    Zimin AV,Smith DR,Sutton G,Yorke JA


    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature450(7167)203-18(2007 Nov)
    ,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I