ORF » Species Summary » Aedes aegypti » LOC5579359 cDNA ORF clone

LOC5579359 cDNA ORF clone, Aedes aegypti(yellow fever mosquito)

The following LOC5579359 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC5579359 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAe131651 XM_021842995.1
Latest version!		 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OAe131651 XM_021842999.1
Latest version!		 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OAe131651 XM_021843003.1
Latest version!		 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC5579359 ( XM_021842999.1 ) cDNA ORF clone, Aedes aegypti(yellow fever mosquito) -> XP_021698691.1 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OAe131651
    Clone ID Related Accession (Same CDS sequence) XM_021842999.1 , XM_021843003.1 , XM_021842995.1
    Accession Version XM_021842999.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1500393600000
    Organism Aedes aegypti(yellow fever mosquito)
    Product PAX-interacting protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035107.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Aedes aegypti Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021698691.1
    CDS161..1852
    Translation

    Target ORF information:

    RefSeq Version XM_021842999.1
    Organism Aedes aegypti(yellow fever mosquito)
    Definition Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021842999.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC5579359 ( XM_021843003.1 ) cDNA ORF clone, Aedes aegypti(yellow fever mosquito) -> XP_021698695.1 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OAe131651
    Clone ID Related Accession (Same CDS sequence) XM_021842999.1 , XM_021843003.1 , XM_021842995.1
    Accession Version XM_021843003.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1500393600000
    Organism Aedes aegypti(yellow fever mosquito)
    Product PAX-interacting protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035107.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Aedes aegypti Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021698695.1
    CDS790..2481
    Translation

    Target ORF information:

    RefSeq Version XM_021843003.1
    Organism Aedes aegypti(yellow fever mosquito)
    Definition Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021843003.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC5579359 ( XM_021842995.1 ) cDNA ORF clone, Aedes aegypti(yellow fever mosquito) -> XP_021698687.1 Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OAe131651
    Clone ID Related Accession (Same CDS sequence) XM_021842999.1 , XM_021843003.1 , XM_021842995.1
    Accession Version XM_021842995.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1692bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1500393600000
    Organism Aedes aegypti(yellow fever mosquito)
    Product PAX-interacting protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035107.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Aedes aegypti Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_021698687.1
    CDS220..1911
    Translation

    Target ORF information:

    RefSeq Version XM_021842995.1
    Organism Aedes aegypti(yellow fever mosquito)
    Definition Aedes aegypti PAX-interacting protein 1 (LOC5579359), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_021842995.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGAGATTCC AGAGAACGTG GATGTTGGTG GCCGGAGTGG CCGTACTCCT GGCATGTTCC 
    ACCGAGGCGC AACAACAGCA GCGTAGACTT CGGGTACGTC CGCGAGTTTT GCAACAACAG 
    CAACAGCAGA ACAGTGCCGA GTTGGACAGT GCCGAAGAAC AGGACAACCG TCCACAGCAA 
    GCCGTACAGT ACTACCGTGC CCAACCTCGC GAAGATGAAG ACCCACGGCA ACTGGTTTTA 
    GTGGCTAGCG AAGAGGACTA CAACGGACAG TATGGAGCTC CAACTCAACG GGCACGAGCT 
    GATACCTACC GACCGGCTGT GAAGGTCACA ACTGCTGCTC CAGTTGCTGC CCGCCAAAAG 
    GTTCAAGAAG CTAGAGCCCC ACCAGTACAA ACCATCCGTA ACTACAACAA GGTGAACGAC 
    GATGGATCAT TCACCTTCGG TTACGAAGCT GCTGACGGAT CGTTCAAGGA AGAAACCCGT 
    GGAACCGATT GCGTTGTTCG AGGCAAGTAC GGTTACATCG ACCCAGACGG TAACAAACGT 
    GAGTTCACCT ATGTGTCTGG AAACCCATGT GACCCTAACA ACCCAGAAGG TAGCGAAGAA 
    GAAGAAGAAA AGTCTGAGGA GGAATCCAAC GAGAACATCC CCCAGAACTA CCCCAGAAGA 
    CCAGTAGCTC CTCGTCCAAC TCGCCCAGCC CCAGTCCCAA CCACTCCTCG CCCAACGACC 
    ACCGTCTTCC AAAACAACTA CAACTCTGGA TACAACCAGG AAGAATCCGA AGAAGAAGTT 
    CAAATCGGTC AACGTGCCCG TCCAGCTGCC CGTCCTTTCG CTAACCAACA GCCACAAACC 
    GTTACGCAGC GCCCACGAGT CCAGATCGTC AGCACCACCC CCAACACCAT CTACCACACA 
    CCAACTCAGA CCGTTCCTGT GAACATCACT CCAAAACCAA TCTACCGACT CCCAGCCCAA 
    AACACCCTCC AGACCCAACC CCCACCAACG ACCTACCGCC CAGATACTAC CACCGCTGGA 
    TTCTTCACCA CCACCAAGGC CAACACCCTC CTGGGAGGAA CCCGTCAACC CCTCGACTTT 
    GACGCAGAAT TCAAGAAATT CCAGCAGGAG AACAAGGTCC CATCCACAAC TCCATCCAAG 
    CCATTCTCGT CATCCACCCC GAAACAGCCC ACTACCAACG CCATCTATCA GACTCAGCTC 
    GTATACGATC CACAAACCGG CCAGTACGAC ACTGCCCTCT ACCAGCAGCT GCCTCAAGGC 
    GACGGTGACT TCCAGCTGAA TCATCGCATC CAGCCATACG TCCACAACCC CGCCCAACAT 
    CAACAACCTC AGCTGGTTTC CCTGGATCAC CTCCAACAGC AGAGCCCCCT GTACCGAACT 
    CAACCACAAC CGGCCCCAGC TCAGGTCCAA ATCCCCCAAC AGCTCTACCA GAAGCAACAG 
    AACGAACTGC AGTTCATCAA CAGCCAGCAG CTATTCGCCC AGCAGCTGGA ACTCCAGCAG 
    AACCAACTGC GTAACGATCG GTTGGAAGCC GCCAAGAAGG GCAACGGACC TCAACAGCAT 
    CGCTTCCAGG CGTCCTCTCC ACAGGTTCAG CGCGTTCCAC AGCCTCAGCA GTACTACTAC 
    ATCCAACCTC AGCAAGGCCA TGCCAGCGGA CAGATCGATG CCTTCCTGAG GGGACACAAT 
    ATTCAGTACT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Genome sequence of Aedes aegypti, a major arbovirus vector.
    Science (New York, N.Y.)316(5832)1718-23(2007 Jun)
    Nene V,Wortman JR,Lawson D,Haas B,Kodira C,Tu ZJ,Loftus B,Xi Z,Megy K,Grabherr M,Ren Q,Zdobnov EM,Lobo NF,Campbell KS,Brown SE,Bonaldo MF,Zhu J,Sinkins SP,Hogenkamp DG,Amedeo P,Arensburger P,Atkinson PW,Bidwell S,Biedler J,Birney E,Bruggner RV,Costas J,Coy MR,Crabtree J,Crawford M,Debruyn B,Decaprio D,Eiglmeier K,Eisenstadt E,El-Dorry H,Gelbart WM,Gomes SL,Hammond M,Hannick LI,Hogan JR,Holmes MH,Jaffe D,Johnston JS,Kennedy RC,Koo H,Kravitz S,Kriventseva EV,Kulp D,Labutti K,Lee E,Li S,Lovin DD,Mao C,Mauceli E,Menck CF,Miller JR,Montgomery P,Mori A,Nascimento AL,Naveira HF,Nusbaum C,O'leary S,Orvis J,Pertea M,Quesneville H,Reidenbach KR,Rogers YH,Roth CW,Schneider JR,Schatz M,Shumway M,Stanke M,Stinson EO,Tubio JM,Vanzee JP,Verjovski-Almeida S,Werner D,White O,Wyder S,Zeng Q,Zhao Q,Zhao Y,Hill CA,Raikhel AS,Soares MB,Knudson DL,Lee NH,Galagan J,Salzberg SL,Paulsen IT,Dimopoulos G,Collins FH,Birren B,Fraser-Liggett CM,Severson DW


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