COL28A1 cDNA ORF clone, Taeniopygia guttata(zebra finch)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL28A1
Entrez Gene ID	100220720
Full Name	collagen alpha-1(XXVIII) chain-like
Gene Type	protein-coding
Organism	Taeniopygia guttata(zebra finch)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012574822.1	XP_012430276.1	LOW QUALITY PROTEIN: collagen alpha-1(XXVIII) chain-like
XM_030278419.1	XP_030134279.1	collagen alpha-1(XXVIII) chain

Pathways from BioSystems
Gene Ontology

The following COL28A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL28A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OTd15438	XM_012574822.1 Latest version!	Taeniopygia guttata collagen alpha-1(XXVIII) chain-like (LOC100220720), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OTd50354	XM_030278419.1 Latest version!	Taeniopygia guttata collagen type XXVIII alpha 1 chain (COL28A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL28A1 ( XM_012574822.1 ) cDNA ORF clone, Taeniopygia guttata(zebra finch) -> XP_012430276.1 Taeniopygia guttata collagen alpha-1(XXVIII) chain-like (LOC100220720), mRNA.

Price & Availability↑

CloneID	OTd15438
Clone ID Related Accession (Same CDS sequence)	XM_012574822.1
Accession Version	XM_012574822.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3489bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1432483200000
Organism	Taeniopygia guttata(zebra finch)
Product	LOW QUALITY PROTEIN: collagen alpha-1(XXVIII) chain-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_002198918.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Taeniopygia guttata Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 13% of CDS bases frameshifts :: corrected 1 indel ##RefSeq-Attributes-END##

ATGAGATTTA GTATGAAGTT ACTCCACTCA CCTACATATC TGTTTATTCT AGATGAAGAT 
TGCATTCTGG AAATTGCTTT TTTACTGGAC AGCTCTGAAA GTGCTAAGGA CTATAATCAT 
GAACAGCAGA AAAAATTTGT ACTACAAACA GTGGACAGAA TGAAAAGTCT GCAGCTTAGT 
TCTGGACGTA CCCTGCGCTG GAGGATGGCC TTACTTCAGT ACAGCAGCAC TGTTTCTTTA 
GAGCAAACTT TCCATGACTG GAAAGGTCCT GAAGCATTCA AATCCCACAT TGCTCCCATC 
ACCCACATAG GTCATGGCAC CTACACAACT TATGCTATAA CTAATCTTAC CCAGCTTTAC 
ATGTCTGAAG GGACTTTGGG TAGTGTAAAA GTAGCTGTGC TTTTCACTGA TGGAGTGGAT 
CATCCAAGAA ACCCAGATAT TTTTGCAGCT ACAGCTGATG CTAAACACCA AGGAATTGTA 
TTTTTCACAA TGGGAATGAC CAGAGTGGCT GAGGATGCTA GCAATGCTGC CAAGCTCCGG 
CTCCTGGCCA GTGTCCCAGC ATCCAGGTTC GTTTTCAACC TCCAGGAGAA AGAAACTGTG 
GAGAAGCCTA TAACCCTGGT GACACAAGCT GTGGATGGAT GTCCCCAGGT TGACACCTGT 
AACTGTGAGA AGGGGGAAAA AGGCCTTCCT GGTCCTGCTG GTAAAAAGGG TCACACTGGG 
GACGATGGAG CTCCAGGCCT GAAAGGAGCA AAGGGGGACC CAGGTCTGAA TGGAATCCCA 
GGACGAGATG GAATAGAGGG GAAAGCTGGA TATAAAGGAG AGAAGGGTGA AAGAGGTGAA 
TGTGGAATCC CAGGAATAAA AGGAGACAGA GGTCCTGAAG GTCCAGTAGG CCCCAGAGGA 
GTAAGAGGGA TACAGGGTCT GCAAGGACAA ACTGGAGATC AAGGGCCTGA AGGCCTGCAA 
GGATCAAAGG GTGAAAGAGG TCTTCCTGGG CCACCTGGCT TGCCTGGAGA GACTGGAATA 
GGACTACCAG GCCCAAAGGG TGACACTGGC TTGACAGGAA GACCAGGCCC TGTTGGCCCA 
CCTGGATTTG GTGAGCCAGG ATTTATGGGG CCTCAAGGAC CACAAGGTGT TCAAGGAGAA 
AGAGGTCCAC CAGGAGAGGG GCTTCCAGGA GCAAAGGGAG ATCGTGGCTT TGATGGACCA 
AAAGGCCCTC GTGGACTTCC AGGCATCAGC ATAAAAGGTG AAAAGGGTGA CTGTGGTCCT 
CCTGGTTTAC CAGGATCAGT TGGATTACCT GGAATTGGAA TTCAAGGAGA AAAGGGAGTG 
GAGGGCCCAA AAGGACCACC TGGCTCTAGA GGGCTACCAG GACAGGGGAT ACCTGGACCA 
AAGGGTGAAC AAGGCTTGCC AGGAGAGACT GGAGTGCCAG GAGAAAGAGG TATTGGAGAA 
CCTGGTTCTA AGGGTGATCC AGGGCCTTCA GGACTGGCAG GTCTGCCTGG TCTTCCAGGA 
GAAGATGGAG CCCCTGGACA AAAGGGTGAA CCAGGGTTGC CTGGTCTTAG AGGTCCTGAA 
GGTGTTCCAG GGATTGGAAT ACAGGGGAAA AAGGGAGATC AAGGACAGAG AGGAATACGT 
GGATTAACAG GACCAACAGG AGTGCCTGGA CCTGTTGGAC CTAAAGGGGA GCCTGGTGTA 
CCAGGACGTC TTGGGATGCC AGGCCCTCCT GGAAGATCTG TGCCTGGACC AAAGGGTGAC 
ATTGGGTTAC CTGGTCTTGC TGGACCAATT GGAGAACCAG GTTTTGGGCT TCCGGGGGCA 
AAGGGTGACC AAGGCCTTCC AGGACCCCCT GGGCCTTTTG GGCAAAAAGG AGATGGTTAT 
CCTGGCCCAC CTGGCTTGCC AGGCCTCCCT GGGATTCCCG GTGAACAAGG CCCAGATGGA 
GTTGGACTGC CAGGACCTAA GGGTGATCCT GGTAGTAGAG GACCAGTTGG CCCTGCTGGT 
CCCCCAGGAA AAGGCTTGCC AGGACCAAAA GGAACCATAG GACGCCCAGG GCCACCTGGC 
TCTCTGGGAC CTCCTGGTGA AGGTATTCAA GGAACTAAGG GGGAACAAGG TATTCAAGGA 
ATGCCAGGAC CACGAGGCCC CCCTGGAGAT GGACTTCTGG GAGAGAAGGG AGATCGTGGA 
GCTACAGGTG ACAAGGGGAA AAAAGGAGAA AAAGGTGATG TGGGCGACCC TGGTTTATCT 
GGAGAACCTG GCAAAACTGG ACCAAAGGGA GACCAAGGCC TAACAAGAGA AGATATAATC 
AAATTAATTA AAGAGATATG CGGTTGCAGT ATTAAATGTA AGGAAATTCC TATGGAGCTT 
GTATTTGTGA TTGACAGCTC TGAGAGTGTG GGACCAGAAA ATTTTGAGAT TATCAAAGAC 
TTTGTAACTG CTTTAGTAGA CAGAGTAACT GTAGGCAGAA ATGCTACCAG AATTGGCCTT 
GTGTTATACA GTTTAGAAGT TCGGCTAGAA TTTGGTCTCA ACAAGTATCC AACCCGCCAG 
GATGTTAAGA GAGCAATTAG GAAAATGCAA TACATGGGAG AAGGCACTCA CACAGGAGCT 
GCTATCCGCA AAGCAACCCA GGAAGGATTT TTTGGTGCTC GAGCAGGCGT GCGGAAAGTA 
GCTATTGTGC TAACAGATGG TCAAACAGAC AAGAGAGAAG CTGTAAAACT AGATCTTGTT 
GTTCGAGAGG CTCATGCAGC AAACATCGAA ATGTATGCAA TAGGAATCCT AAATACTTCA 
GATCCAACAC AGGTTGAGTT TGTGCGTGAA CTAAATCTGA TTGCTTCAGA CCCAGACGGA 
GAACACGTGT ATCTCATTGA TGACTTTAAC ACTCTCTCAG CTCTGGAGTC CAAATTAGTC 
AATCAATTTT GTGAAGATGA ACATGGCACC TTAGTATATA ACCATAATGA AAATGGTGCA 
AGTATAAGTG GGCAATCCTT CCATTCAGTA TCTCCAAGTT CTCTACATTA CATACTTCAG 
AAGAATAATG TTAATAGACA ATCACTTTCA GCACAGACAC TTAGAGTATC TACAGTAGAA 
AGTCCTCTGA ATCTTGGCCA TCTTCCTCAA CCATTAGCTT CGACCGATGT ACCTCCTGTA 
GTCTATGACA CCTACAAAGA GGAACAAGAT GAAGAACAAC AGCCAACCCT GCTAACAGAA 
AACACTAGAG AAAGTATTGT GGACCTCCGC TGCAAGCTAA GGCTGGATCA AGGGCCCTGT 
CGTGTTTACA CGATCAGATG GTATTACGAT AAACAAGCCA ATGCCTGTGC TCAGTTTTGG 
TATGGTGGCT GCCATGGAAA TGCAAACCGC TTTGAGTCTG AACAGGAATG TAGACAGAAC 
GCTCGGGCCC TGTCAGGACA GGGCCCGAGG GAGGACGGGG GATTCCGGCC CAGCATTTAT 
TTCATCCAGC CTGTGCCCAT TTCCGGATGG GTGCAACGGG GTCCTCGCCA ACCCAGGGAC 
AAGTTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012430276.1
CDS	1..3489
Translation	MRFSMKLLHSPTYLFILDEDCILEIAFLLDSSESAKDYNHEQQKKFVLQTVDRMKSLQLSSGRTLRWRMALLQYSSTVSLEQTFHDWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLYMSEGTLGSVKVAVLFTDGVDHPRNPDIFAATADAKHQGIVFFTMGMTRVAEDASNAAKLRLLASVPASRFVFNLQEKETVEKPITLVTQAVDGCPQVDTCNCEKGEKGLPGPAGKKGHTGDDGAPGLKGAKGDPGLNGIPGRDGIEGKAGYKGEKGERGECGIPGIKGDRGPEGPVGPRGVRGIQGLQGQTGDQGPEGLQGSKGERGLPGPPGLPGETGIGLPGPKGDTGLTGRPGPVGPPGFGEPGFMGPQGPQGVQGERGPPGEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGDCGPPGLPGSVGLPGIGIQGEKGVEGPKGPPGSRGLPGQGIPGPKGEQGLPGETGVPGERGIGEPGSKGDPGPSGLAGLPGLPGEDGAPGQKGEPGLPGLRGPEGVPGIGIQGKKGDQGQRGIRGLTGPTGVPGPVGPKGEPGVPGRLGMPGPPGRSVPGPKGDIGLPGLAGPIGEPGFGLPGAKGDQGLPGPPGPFGQKGDGYPGPPGLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPVGPAGPPGKGLPGPKGTIGRPGPPGSLGPPGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDRGATGDKGKKGEKGDVGDPGLSGEPGKTGPKGDQGLTREDIIKLIKEICGCSIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTALVDRVTVGRNATRIGLVLYSLEVRLEFGLNKYPTRQDVKRAIRKMQYMGEGTHTGAAIRKATQEGFFGARAGVRKVAIVLTDGQTDKREAVKLDLVVREAHAANIEMYAIGILNTSDPTQVEFVRELNLIASDPDGEHVYLIDDFNTLSALESKLVNQFCEDEHGTLVYNHNENGASISGQSFHSVSPSSLHYILQKNNVNRQSLSAQTLRVSTVESPLNLGHLPQPLASTDVPPVVYDTYKEEQDEEQQPTLLTENTRESIVDLRCKLRLDQGPCRVYTIRWYYDKQANACAQFWYGGCHGNANRFESEQECRQNARALSGQGPREDGGFRPSIYFIQPVPISGWVQRGPRQPRDKF

Target ORF information:

RefSeq Version	XM_012574822.1
Organism	Taeniopygia guttata(zebra finch)
Definition	Taeniopygia guttata collagen alpha-1(XXVIII) chain-like (LOC100220720), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012574822.1

ORF Insert Sequence:

ATGAGATTTA GTATGAAGTT ACTCCACTCA CCTACATATC TGTTTATTCT AGATGAAGAT 
TGCATTCTGG AAATTGCTTT TTTACTGGAC AGCTCTGAAA GTGCTAAGGA CTATAATCAT 
GAACAGCAGA AAAAATTTGT ACTACAAACA GTGGACAGAA TGAAAAGTCT GCAGCTTAGT 
TCTGGACGTA CCCTGCGCTG GAGGATGGCC TTACTTCAGT ACAGCAGCAC TGTTTCTTTA 
GAGCAAACTT TCCATGACTG GAAAGGTCCT GAAGCATTCA AATCCCACAT TGCTCCCATC 
ACCCACATAG GTCATGGCAC CTACACAACT TATGCTATAA CTAATCTTAC CCAGCTTTAC 
ATGTCTGAAG GGACTTTGGG TAGTGTAAAA GTAGCTGTGC TTTTCACTGA TGGAGTGGAT 
CATCCAAGAA ACCCAGATAT TTTTGCAGCT ACAGCTGATG CTAAACACCA AGGAATTGTA 
TTTTTCACAA TGGGAATGAC CAGAGTGGCT GAGGATGCTA GCAATGCTGC CAAGCTCCGG 
CTCCTGGCCA GTGTCCCAGC ATCCAGGTTC GTTTTCAACC TCCAGGAGAA AGAAACTGTG 
GAGAAGCCTA TAACCCTGGT GACACAAGCT GTGGATGGAT GTCCCCAGGT TGACACCTGT 
AACTGTGAGA AGGGGGAAAA AGGCCTTCCT GGTCCTGCTG GTAAAAAGGG TCACACTGGG 
GACGATGGAG CTCCAGGCCT GAAAGGAGCA AAGGGGGACC CAGGTCTGAA TGGAATCCCA 
GGACGAGATG GAATAGAGGG GAAAGCTGGA TATAAAGGAG AGAAGGGTGA AAGAGGTGAA 
TGTGGAATCC CAGGAATAAA AGGAGACAGA GGTCCTGAAG GTCCAGTAGG CCCCAGAGGA 
GTAAGAGGGA TACAGGGTCT GCAAGGACAA ACTGGAGATC AAGGGCCTGA AGGCCTGCAA 
GGATCAAAGG GTGAAAGAGG TCTTCCTGGG CCACCTGGCT TGCCTGGAGA GACTGGAATA 
GGACTACCAG GCCCAAAGGG TGACACTGGC TTGACAGGAA GACCAGGCCC TGTTGGCCCA 
CCTGGATTTG GTGAGCCAGG ATTTATGGGG CCTCAAGGAC CACAAGGTGT TCAAGGAGAA 
AGAGGTCCAC CAGGAGAGGG GCTTCCAGGA GCAAAGGGAG ATCGTGGCTT TGATGGACCA 
AAAGGCCCTC GTGGACTTCC AGGCATCAGC ATAAAAGGTG AAAAGGGTGA CTGTGGTCCT 
CCTGGTTTAC CAGGATCAGT TGGATTACCT GGAATTGGAA TTCAAGGAGA AAAGGGAGTG 
GAGGGCCCAA AAGGACCACC TGGCTCTAGA GGGCTACCAG GACAGGGGAT ACCTGGACCA 
AAGGGTGAAC AAGGCTTGCC AGGAGAGACT GGAGTGCCAG GAGAAAGAGG TATTGGAGAA 
CCTGGTTCTA AGGGTGATCC AGGGCCTTCA GGACTGGCAG GTCTGCCTGG TCTTCCAGGA 
GAAGATGGAG CCCCTGGACA AAAGGGTGAA CCAGGGTTGC CTGGTCTTAG AGGTCCTGAA 
GGTGTTCCAG GGATTGGAAT ACAGGGGAAA AAGGGAGATC AAGGACAGAG AGGAATACGT 
GGATTAACAG GACCAACAGG AGTGCCTGGA CCTGTTGGAC CTAAAGGGGA GCCTGGTGTA 
CCAGGACGTC TTGGGATGCC AGGCCCTCCT GGAAGATCTG TGCCTGGACC AAAGGGTGAC 
ATTGGGTTAC CTGGTCTTGC TGGACCAATT GGAGAACCAG GTTTTGGGCT TCCGGGGGCA 
AAGGGTGACC AAGGCCTTCC AGGACCCCCT GGGCCTTTTG GGCAAAAAGG AGATGGTTAT 
CCTGGCCCAC CTGGCTTGCC AGGCCTCCCT GGGATTCCCG GTGAACAAGG CCCAGATGGA 
GTTGGACTGC CAGGACCTAA GGGTGATCCT GGTAGTAGAG GACCAGTTGG CCCTGCTGGT 
CCCCCAGGAA AAGGCTTGCC AGGACCAAAA GGAACCATAG GACGCCCAGG GCCACCTGGC 
TCTCTGGGAC CTCCTGGTGA AGGTATTCAA GGAACTAAGG GGGAACAAGG TATTCAAGGA 
ATGCCAGGAC CACGAGGCCC CCCTGGAGAT GGACTTCTGG GAGAGAAGGG AGATCGTGGA 
GCTACAGGTG ACAAGGGGAA AAAAGGAGAA AAAGGTGATG TGGGCGACCC TGGTTTATCT 
GGAGAACCTG GCAAAACTGG ACCAAAGGGA GACCAAGGCC TAACAAGAGA AGATATAATC 
AAATTAATTA AAGAGATATG CGGTTGCAGT ATTAAATGTA AGGAAATTCC TATGGAGCTT 
GTATTTGTGA TTGACAGCTC TGAGAGTGTG GGACCAGAAA ATTTTGAGAT TATCAAAGAC 
TTTGTAACTG CTTTAGTAGA CAGAGTAACT GTAGGCAGAA ATGCTACCAG AATTGGCCTT 
GTGTTATACA GTTTAGAAGT TCGGCTAGAA TTTGGTCTCA ACAAGTATCC AACCCGCCAG 
GATGTTAAGA GAGCAATTAG GAAAATGCAA TACATGGGAG AAGGCACTCA CACAGGAGCT 
GCTATCCGCA AAGCAACCCA GGAAGGATTT TTTGGTGCTC GAGCAGGCGT GCGGAAAGTA 
GCTATTGTGC TAACAGATGG TCAAACAGAC AAGAGAGAAG CTGTAAAACT AGATCTTGTT 
GTTCGAGAGG CTCATGCAGC AAACATCGAA ATGTATGCAA TAGGAATCCT AAATACTTCA 
GATCCAACAC AGGTTGAGTT TGTGCGTGAA CTAAATCTGA TTGCTTCAGA CCCAGACGGA 
GAACACGTGT ATCTCATTGA TGACTTTAAC ACTCTCTCAG CTCTGGAGTC CAAATTAGTC 
AATCAATTTT GTGAAGATGA ACATGGCACC TTAGTATATA ACCATAATGA AAATGGTGCA 
AGTATAAGTG GGCAATCCTT CCATTCAGTA TCTCCAAGTT CTCTACATTA CATACTTCAG 
AAGAATAATG TTAATAGACA ATCACTTTCA GCACAGACAC TTAGAGTATC TACAGTAGAA 
AGTCCTCTGA ATCTTGGCCA TCTTCCTCAA CCATTAGCTT CGACCGATGT ACCTCCTGTA 
GTCTATGACA CCTACAAAGA GGAACAAGAT GAAGAACAAC AGCCAACCCT GCTAACAGAA 
AACACTAGAG AAAGTATTGT GGACCTCCGC TGCAAGCTAA GGCTGGATCA AGGGCCCTGT 
CGTGTTTACA CGATCAGATG GTATTACGAT AAACAAGCCA ATGCCTGTGC TCAGTTTTGG 
TATGGTGGCT GCCATGGAAA TGCAAACCGC TTTGAGTCTG AACAGGAATG TAGACAGAAC 
GCTCGGGCCC TGTCAGGACA GGGCCCGAGG GAGGACGGGG GATTCCGGCC CAGCATTTAT 
TTCATCCAGC CTGTGCCCAT TTCCGGATGG GTGCAACGGG GTCCTCGCCA ACCCAGGGAC 
AAGTTTTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

COL28A1 ( XM_030278419.1 ) cDNA ORF clone, Taeniopygia guttata(zebra finch) -> XP_030134279.1 Taeniopygia guttata collagen type XXVIII alpha 1 chain (COL28A1), mRNA.

Price & Availability↑

CloneID	OTd50354
Clone ID Related Accession (Same CDS sequence)	XM_030278419.1
Accession Version	XM_030278419.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3651bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1565193600000
Organism	Taeniopygia guttata(zebra finch)
Product	collagen alpha-1(XXVIII) chain
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_044219.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Taeniopygia guttata Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTTTATC ATTCTTGTAC TGCTGTGCTT CTATATTTGT GTTTTTTAGG AAACAAACAA 
ATGATGTTCC TCAGATTCTG GTGGCTTTTG TGGATACTTG AACATCATGA AATTTTAGCA 
GAAAATCTCA GGGAAGAGAA GATACATGGA TTGAGAAGAT CAAAACCTAA ACACATTCTG 
TCAAATATTG TAGAAAAATA TCCCAGCTCA AATGATCAAG ATGAAGATTG CATTCTGGAA 
ATTGCTTTTT TACTGGACAG CTCTGAAAGT GCTAAGGACT ATAATCATGA ACAGCAGAAA 
AAATTTGTAC TACAAACAGT GGACAGAATG AAAAGTCTGC AGCTTAGTTC TGGACGTACC 
CTGCGCTGGA GGATGGCCTT ACTTCAGTAC AGCAGCACTG TTTCTTTAGA GCAAACTTTC 
CATGACTGGA AAGGTCCTGA AGCATTCAAA TCCCACATTG CTCCCATCAC CCACATAGGT 
CATGGCACCT ACACAACTTA TGCTATAACT AATCTTACCC AGCTTTACAT GTCTGAAGGG 
ACTTTGGGTA GTGTAAAAGT AGCTGTGCTT TTCACTGATG GAGTGGATCA TCCAAGAAAC 
CCAGATATTT TTGCAGCTAC AGCTGATGCT AAACACCAAG GAATTGTATT TTTCACAATG 
GGAATGACCA GAGTGGCTGA GGATGCTAGC AATGCTGCCA AGCTCCGGCT CCTGGCCAGT 
GTCCCAGCAT CCAGGTTCGT TTTCAACCTC CAGGAGAAAG AAACTGTGGA GAAGGTTCTC 
AAAGAAATGA AAGATCTGTC TGAGGAAGAG TGTCCCCAGG TTGACACCTG TAGCTGTGAG 
AAGGGGGAAA GAGGCCTTCC TGGTCCTGCT GGTAAAAAGG GTCACACTGG GGACGATGGA 
GCTCCAGGCC TGAAAGGAGC AAAGGGGGAC CCAGGTCTGA ATGGAATCCC AGGACGAGAT 
GGAATAGAGG GGAAAGCTGG ATATAAAGGA GAGAAGGGTG AAAGAGGTGA ATGTGGAATC 
CCAGGAATAA AAGGAGACAG AGGTCCTGAA GGTCCAGTAG GCCCCAGAGG AGTAAGAGGG 
ATACAGGGTC TGCAAGGACA AACTGGAGAT CAAGGGCCTG AAGGCCTGCA AGGATCAAAG 
GGTGAAAGAG GTCTTCCTGG GCCACCTGGC TTGCCCGGAG AGACTGGAAT AGGACTACCA 
GGCCCAAAGG GTGACACTGG CTTGACAGGA AGACCGGGCC CTGTTGGCCC ACCTGGATTT 
GGTGAGCCAG GATTTATGGG GCCTCAAGGA CCACAAGGTG TTCAAGGAGA AAGAGGTCCA 
CCAGGAGAGG GGCTTCCAGG AGCAAAGGGA GATCGTGGCT TTGATGGACC AAAAGGCCCT 
CGTGGACTTC CAGGCATCAG CATAAAAGGT GAAAAGGGTG ACTGTGGTCC TCCTGGTTTA 
CCAGGATCAG TTGGATTACC TGGAATTGGA ATTCAAGGAG AAAAGGGAGT GGAGGGCCCA 
AAAGGACCAC CTGGCTCTAG AGGGCTACCA GGACAGGGGA TACCTGGACC AAAGGGTGAA 
CAAGGCTTGC CAGGAGAGAC TGGAGTGCCA GGAGAAAGAG GTATTGGAGA ACCTGGTTCT 
AAGGGTGATC CAGGGCCTTC AGGACTGGCA GGTCTGCCTG GTCTTCCAGG AGAAGATGGA 
GCCCCTGGAC AAAAGGGTGA ACCAGGGTTG CCTGGTCTTA GAGGTCCTGA AGGTGTTCCA 
GGGATTGGAA TACAGGGGAA AAAGGGAGAT CAAGGACAGA GAGGAATACG TGGATTAACA 
GGACCAACAG GAGTGCCTGG ACCTGTTGGA CCTAAAGGGG AGCCTGGTGT ACCAGGACGT 
CTTGGGATGC CAGGCCCTCC TGGAAGATCT GTGCCTGGAC CAAAGGGTGA CATTGGGTTA 
CCTGGTCTTG CTGGACCAAT TGGAGAACCA GGTTTTGGGC TTCCGGGGGC AAAGGGTGAC 
CAAGGCCTTC CAGGACCCCC TGGGCCTTTT GGGCAAAAAG GAGATGGTTA TCCTGGCCCA 
CCTGGCTTGC CAGGCCTCCC TGGGATTCCC GGTGAACAAG GCCCAGATGG AGTTGGACTG 
CCAGGACCTA AGGGTGATCC TGGTAGTAGA GGACCAGTTG GCCCTGCTGG TCCCCCAGGA 
AAAGGCTTGC CAGGACCAAA AGGAACCATA GGACGCCCAG GGCCACCTGG CTCTCTGGGA 
CCTCCTGGTG AAGGTATTCA AGGAACTAAG GGGGAACAAG GTATTCAAGG AATGCCAGGA 
CCACGAGGCC CCCCTGGAGA TGGACTTCTG GGAGAGAAGG GAGATCGTGG AGCTACAGGT 
GACAAGGGGA AAAAAGGAGA AAAAGGTGAT GTGGGCGACC CTGGTTTATC TGGAGAACCT 
GGCAAAACTG GACCAAAGGG AGACCAAGGC CTAACAAGAG AAGATATAAT CAAATTAATT 
AAAGAGATAT GCGGTTGCAG TATTAAATGT AAGGAAATTC CTATGGAGCT TGTATTTGTG 
ATTGACAGCT CTGAGAGTGT GGGACCAGAA AATTTTGAGA TTATCAAAGA CTTTGTAACT 
GCTTTAGTAG ACAGAGTAAC TGTAGGCAGA AATGCTACCA GAATTGGCCT TGTGTTATAC 
AGTTTAGAAG TTCGGCTAGA ATTTGGTCTC AACAAGTATC CAACCCGCCA GGATGTTAAG 
AGAGCAATTA GGAAAATGCA ATACATGGGA GAAGGCACTC ACACAGGAAC TGCTATCCGC 
AAAGCAACCC AGGAAGGATT TTCTGGTGCT CGAGCAGGTG TGCGGAAAGT AGCTATTGTG 
CTAACAGATG GTCAAACAGA CAAGAGAGAA GCTGTAAAAC TAGATCTTGT TGTTCGAGAG 
GCTCATGCAG CAAACATCGA AATGTATGCA ATAGGAATCC TAAATACTTC AGATCCAACA 
CAGGTTGAGT TTGTGCGTGA ACTAAATCTG ATTGCTTCAG ACCCAGACGG AGAACACGTG 
TATCTCATTG ATGACTTTAA CACTCTCTCA GCTCTGGAGT CCAAATTAGT CAATCAATTT 
TGTGAAGATG AACATGGCAC CTTAGTATAT AACCATAATG AAAATGGTGC AAGTATAAGT 
GGGCAATCCT TCCATTCAGT ATCTCCAAGT TCTCTACATT ACATACTTCA GAAGAATAAT 
GTTAATAGAC AATCACTTTC AGCACAGACA CTTAGAGTAT CTACAGTAGA AAGTCCTCTG 
AATCTTGGCC ATCTTCCTCA ACCATTAGCT TCGACCGATG TACCTCCTGT AGTCTATGAC 
ACCTACAAAG AGGAACAAGA TGAAGAACAA CAGCCAACCC TGCTAACAGA AAACACTAGA 
GCTGTGTTAC CATTACTGTC ATCTAAACAA CCACCATCCA CTAAAGTGAT GACATCATCA 
CTTCCAACTG CAGGCCCCAC ACCAAGACCT GAAAGTATTG TGGACCTCCG CTGCAAGCTA 
AGGCTGGATC AAGGGCCCTG TCGTGTTTAC ACGATCAGAT GGTATTACGA TAAACAAGCC 
AATGCCTGTG CTCAGTTTTG GTATGGTGGC TGCCATGGAA ATGCAAACCG CTTTGAGTCT 
GAACAGGAAT GTAGACAGGC TTGTGTATTT TTTTCTGGAG GTAGGAATTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_030134279.1
CDS	523..4173
Translation	MFYHSCTAVLLYLCFLGNKQMMFLRFWWLLWILEHHEILAENLREEKIHGLRRSKPKHILSNIVEKYPSSNDQDEDCILEIAFLLDSSESAKDYNHEQQKKFVLQTVDRMKSLQLSSGRTLRWRMALLQYSSTVSLEQTFHDWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLYMSEGTLGSVKVAVLFTDGVDHPRNPDIFAATADAKHQGIVFFTMGMTRVAEDASNAAKLRLLASVPASRFVFNLQEKETVEKVLKEMKDLSEEECPQVDTCSCEKGERGLPGPAGKKGHTGDDGAPGLKGAKGDPGLNGIPGRDGIEGKAGYKGEKGERGECGIPGIKGDRGPEGPVGPRGVRGIQGLQGQTGDQGPEGLQGSKGERGLPGPPGLPGETGIGLPGPKGDTGLTGRPGPVGPPGFGEPGFMGPQGPQGVQGERGPPGEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGDCGPPGLPGSVGLPGIGIQGEKGVEGPKGPPGSRGLPGQGIPGPKGEQGLPGETGVPGERGIGEPGSKGDPGPSGLAGLPGLPGEDGAPGQKGEPGLPGLRGPEGVPGIGIQGKKGDQGQRGIRGLTGPTGVPGPVGPKGEPGVPGRLGMPGPPGRSVPGPKGDIGLPGLAGPIGEPGFGLPGAKGDQGLPGPPGPFGQKGDGYPGPPGLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPVGPAGPPGKGLPGPKGTIGRPGPPGSLGPPGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDRGATGDKGKKGEKGDVGDPGLSGEPGKTGPKGDQGLTREDIIKLIKEICGCSIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTALVDRVTVGRNATRIGLVLYSLEVRLEFGLNKYPTRQDVKRAIRKMQYMGEGTHTGTAIRKATQEGFSGARAGVRKVAIVLTDGQTDKREAVKLDLVVREAHAANIEMYAIGILNTSDPTQVEFVRELNLIASDPDGEHVYLIDDFNTLSALESKLVNQFCEDEHGTLVYNHNENGASISGQSFHSVSPSSLHYILQKNNVNRQSLSAQTLRVSTVESPLNLGHLPQPLASTDVPPVVYDTYKEEQDEEQQPTLLTENTRAVLPLLSSKQPPSTKVMTSSLPTAGPTPRPESIVDLRCKLRLDQGPCRVYTIRWYYDKQANACAQFWYGGCHGNANRFESEQECRQACVFFSGGRN

Target ORF information:

RefSeq Version	XM_030278419.1
Organism	Taeniopygia guttata(zebra finch)
Definition	Taeniopygia guttata collagen type XXVIII alpha 1 chain (COL28A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_030278419.1

ORF Insert Sequence:

ATGTTTTATC ATTCTTGTAC TGCTGTGCTT CTATATTTGT GTTTTTTAGG AAACAAACAA 
ATGATGTTCC TCAGATTCTG GTGGCTTTTG TGGATACTTG AACATCATGA AATTTTAGCA 
GAAAATCTCA GGGAAGAGAA GATACATGGA TTGAGAAGAT CAAAACCTAA ACACATTCTG 
TCAAATATTG TAGAAAAATA TCCCAGCTCA AATGATCAAG ATGAAGATTG CATTCTGGAA 
ATTGCTTTTT TACTGGACAG CTCTGAAAGT GCTAAGGACT ATAATCATGA ACAGCAGAAA 
AAATTTGTAC TACAAACAGT GGACAGAATG AAAAGTCTGC AGCTTAGTTC TGGACGTACC 
CTGCGCTGGA GGATGGCCTT ACTTCAGTAC AGCAGCACTG TTTCTTTAGA GCAAACTTTC 
CATGACTGGA AAGGTCCTGA AGCATTCAAA TCCCACATTG CTCCCATCAC CCACATAGGT 
CATGGCACCT ACACAACTTA TGCTATAACT AATCTTACCC AGCTTTACAT GTCTGAAGGG 
ACTTTGGGTA GTGTAAAAGT AGCTGTGCTT TTCACTGATG GAGTGGATCA TCCAAGAAAC 
CCAGATATTT TTGCAGCTAC AGCTGATGCT AAACACCAAG GAATTGTATT TTTCACAATG 
GGAATGACCA GAGTGGCTGA GGATGCTAGC AATGCTGCCA AGCTCCGGCT CCTGGCCAGT 
GTCCCAGCAT CCAGGTTCGT TTTCAACCTC CAGGAGAAAG AAACTGTGGA GAAGGTTCTC 
AAAGAAATGA AAGATCTGTC TGAGGAAGAG TGTCCCCAGG TTGACACCTG TAGCTGTGAG 
AAGGGGGAAA GAGGCCTTCC TGGTCCTGCT GGTAAAAAGG GTCACACTGG GGACGATGGA 
GCTCCAGGCC TGAAAGGAGC AAAGGGGGAC CCAGGTCTGA ATGGAATCCC AGGACGAGAT 
GGAATAGAGG GGAAAGCTGG ATATAAAGGA GAGAAGGGTG AAAGAGGTGA ATGTGGAATC 
CCAGGAATAA AAGGAGACAG AGGTCCTGAA GGTCCAGTAG GCCCCAGAGG AGTAAGAGGG 
ATACAGGGTC TGCAAGGACA AACTGGAGAT CAAGGGCCTG AAGGCCTGCA AGGATCAAAG 
GGTGAAAGAG GTCTTCCTGG GCCACCTGGC TTGCCCGGAG AGACTGGAAT AGGACTACCA 
GGCCCAAAGG GTGACACTGG CTTGACAGGA AGACCGGGCC CTGTTGGCCC ACCTGGATTT 
GGTGAGCCAG GATTTATGGG GCCTCAAGGA CCACAAGGTG TTCAAGGAGA AAGAGGTCCA 
CCAGGAGAGG GGCTTCCAGG AGCAAAGGGA GATCGTGGCT TTGATGGACC AAAAGGCCCT 
CGTGGACTTC CAGGCATCAG CATAAAAGGT GAAAAGGGTG ACTGTGGTCC TCCTGGTTTA 
CCAGGATCAG TTGGATTACC TGGAATTGGA ATTCAAGGAG AAAAGGGAGT GGAGGGCCCA 
AAAGGACCAC CTGGCTCTAG AGGGCTACCA GGACAGGGGA TACCTGGACC AAAGGGTGAA 
CAAGGCTTGC CAGGAGAGAC TGGAGTGCCA GGAGAAAGAG GTATTGGAGA ACCTGGTTCT 
AAGGGTGATC CAGGGCCTTC AGGACTGGCA GGTCTGCCTG GTCTTCCAGG AGAAGATGGA 
GCCCCTGGAC AAAAGGGTGA ACCAGGGTTG CCTGGTCTTA GAGGTCCTGA AGGTGTTCCA 
GGGATTGGAA TACAGGGGAA AAAGGGAGAT CAAGGACAGA GAGGAATACG TGGATTAACA 
GGACCAACAG GAGTGCCTGG ACCTGTTGGA CCTAAAGGGG AGCCTGGTGT ACCAGGACGT 
CTTGGGATGC CAGGCCCTCC TGGAAGATCT GTGCCTGGAC CAAAGGGTGA CATTGGGTTA 
CCTGGTCTTG CTGGACCAAT TGGAGAACCA GGTTTTGGGC TTCCGGGGGC AAAGGGTGAC 
CAAGGCCTTC CAGGACCCCC TGGGCCTTTT GGGCAAAAAG GAGATGGTTA TCCTGGCCCA 
CCTGGCTTGC CAGGCCTCCC TGGGATTCCC GGTGAACAAG GCCCAGATGG AGTTGGACTG 
CCAGGACCTA AGGGTGATCC TGGTAGTAGA GGACCAGTTG GCCCTGCTGG TCCCCCAGGA 
AAAGGCTTGC CAGGACCAAA AGGAACCATA GGACGCCCAG GGCCACCTGG CTCTCTGGGA 
CCTCCTGGTG AAGGTATTCA AGGAACTAAG GGGGAACAAG GTATTCAAGG AATGCCAGGA 
CCACGAGGCC CCCCTGGAGA TGGACTTCTG GGAGAGAAGG GAGATCGTGG AGCTACAGGT 
GACAAGGGGA AAAAAGGAGA AAAAGGTGAT GTGGGCGACC CTGGTTTATC TGGAGAACCT 
GGCAAAACTG GACCAAAGGG AGACCAAGGC CTAACAAGAG AAGATATAAT CAAATTAATT 
AAAGAGATAT GCGGTTGCAG TATTAAATGT AAGGAAATTC CTATGGAGCT TGTATTTGTG 
ATTGACAGCT CTGAGAGTGT GGGACCAGAA AATTTTGAGA TTATCAAAGA CTTTGTAACT 
GCTTTAGTAG ACAGAGTAAC TGTAGGCAGA AATGCTACCA GAATTGGCCT TGTGTTATAC 
AGTTTAGAAG TTCGGCTAGA ATTTGGTCTC AACAAGTATC CAACCCGCCA GGATGTTAAG 
AGAGCAATTA GGAAAATGCA ATACATGGGA GAAGGCACTC ACACAGGAAC TGCTATCCGC 
AAAGCAACCC AGGAAGGATT TTCTGGTGCT CGAGCAGGTG TGCGGAAAGT AGCTATTGTG 
CTAACAGATG GTCAAACAGA CAAGAGAGAA GCTGTAAAAC TAGATCTTGT TGTTCGAGAG 
GCTCATGCAG CAAACATCGA AATGTATGCA ATAGGAATCC TAAATACTTC AGATCCAACA 
CAGGTTGAGT TTGTGCGTGA ACTAAATCTG ATTGCTTCAG ACCCAGACGG AGAACACGTG 
TATCTCATTG ATGACTTTAA CACTCTCTCA GCTCTGGAGT CCAAATTAGT CAATCAATTT 
TGTGAAGATG AACATGGCAC CTTAGTATAT AACCATAATG AAAATGGTGC AAGTATAAGT 
GGGCAATCCT TCCATTCAGT ATCTCCAAGT TCTCTACATT ACATACTTCA GAAGAATAAT 
GTTAATAGAC AATCACTTTC AGCACAGACA CTTAGAGTAT CTACAGTAGA AAGTCCTCTG 
AATCTTGGCC ATCTTCCTCA ACCATTAGCT TCGACCGATG TACCTCCTGT AGTCTATGAC 
ACCTACAAAG AGGAACAAGA TGAAGAACAA CAGCCAACCC TGCTAACAGA AAACACTAGA 
GCTGTGTTAC CATTACTGTC ATCTAAACAA CCACCATCCA CTAAAGTGAT GACATCATCA 
CTTCCAACTG CAGGCCCCAC ACCAAGACCT GAAAGTATTG TGGACCTCCG CTGCAAGCTA 
AGGCTGGATC AAGGGCCCTG TCGTGTTTAC ACGATCAGAT GGTATTACGA TAAACAAGCC 
AATGCCTGTG CTCAGTTTTG GTATGGTGGC TGCCATGGAA ATGCAAACCG CTTTGAGTCT 
GAACAGGAAT GTAGACAGGC TTGTGTATTT TTTTCTGGAG GTAGGAATTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

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COL28A1 cDNA ORF clone, Taeniopygia guttata(zebra finch)

Gene

Clones

gRNAs

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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