PB000039.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000039.03.0
Entrez Gene ID	3428996
Full Name	DEAD/DEAH box ATP-dependent RNA helicase, putative
Synonyms	PB000039.03.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_022858300.1	XP_022714132.1	DEAD/DEAH box ATP-dependent RNA helicase, putative
XM_675255.1	XP_680347.1	DEAD/DEAH box helicase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000039.03.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000039.03.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07736	XM_022858300.1 Latest version!	Plasmodium berghei ANKA DEAD/DEAH box ATP-dependent RNA helicase, putative (PBANKA_145520), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000039.03.0 ( XM_022858300.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022714132.1 Plasmodium berghei ANKA DEAD/DEAH box ATP-dependent RNA helicase, putative (PBANKA_145520), partial mRNA.

Price & Availability↑

CloneID	OPm07736
Clone ID Related Accession (Same CDS sequence)	XM_022858300.1
Accession Version	XM_022858300.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2580bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	DEAD/DEAH box ATP-dependent RNA helicase, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). COMPLETENESS: incomplete on both ends.

ATGGATCAGG AGGATGGGCC CCAGAATGAA GTCGAGGAAG GAGCGCCAGA AGAAATAAAA 
GAAGAGGTAT ATACAGAAGA AGTAGCAGAA GAAGTAGAAA AAGAAGAAGA AGCAGGAGAA 
GCAGAAGATG AAGCAGATGA AGAAGCAGAA GGCGAGGATG ATGACGAAGG AGAAATAAAT 
GAAGACGATG ACAAAGCCCC AAGCAAGATG AAAGTCAAAA ATAATACGGA AGAAATATTC 
TTTGATGTAA GTAACAATTT TGAGGGGTTC GACAATATTT TGTTAGATGT GAGACTAAGG 
AAAGCATTGC TTTATATATT TAAATTCAAG CATCCGACAA AAATTCAAAA AGTTTCAATT 
CCAAGTATAT TAAAAGGTAA TGACACAATT TTAAATGCAA AAACAGGGTC TGGGAAAACA 
ATGGCCTATT TGATTCCAGC AATTCAGCGA TTGATAAAGT TCAACATCGA CGAAAAAGAA 
CATTTAAAAT TTTTTTATAA ATGTATAATT ATAGCCCCAA CAGAAGAACT ATGCTTACAA 
ATATATAATG TGGGTGATAA ATTATGCTCA TATTTAAAAG GAATAGTAAC AATTAACCAT 
AATGTAAATA ATATTTTTTA TGAGCATCCT ACTATACTTG TAAGTACTCC TAAACATTTA 
TGTAACTATA TATTAGAACA CAAAAATAAA AATAACCAAA ATATATTATC CAATTTAAAA 
ATATTAATTA TTGATGAGGC AGATGTAATT CATACAAAAG AATTCCAAAA GCCAATGTAT 
ACACTAACAC GCAATTATTT ACCAAAAAAT TTTTCAAAAA AATATCAAAT TATTATGGCT 
TCAGCTACTT TAAAAAAAAA TATTATAGAA AAAACTAATC TATTTTTGCA TAAGCCAATT 
TATTTAACTA CTGAAGAGGA TAAAAAAACA ACTGAAAAGA AAAGTAAGAA GCATCCTATT 
GATAGTCAAA TTGTAGAAAG TTCTAAAAAA AGTCGAAACA ATAAGACTGT AAATAATGAA 
GGTGTAATAT ATCAGGGAAA TGATGACGTC GATGCAACAA ATTTTAAATT TGTTGGAAAA 
TCCTTTTATT ATCTTTATGA CGAGGAATTA ACAAAGTACA TTTATCTATA TTTATTGATA 
AAAAATAAAA CGGTCAAATT TAAATCAATA ATATTTACGG CATCGACAGC AGATGCGTAT 
AAAATAAAAA TATTTTTAAC ATATCTAAAC ATCACATCTT CTATACTTAA TCCAAATCAT 
CCTATTTTGA TCAAGCAAAA TATTATTTTG TCATTCAACA GTTCAAAATT TTATTTCTTA 
ATATGTCCGC AGTTTGAAAG AAACACGGTT CGCACTTCCC CCAAGGAATC AGTAAATGTC 
GATTTATCTG AAGATGAACC AACCATGGAA GAACTAACCG ATGAGAAACT CAAGAGCGAA 
CTATCTGAAA ATGAACCAAC CAAAGAAGAT ATCAACAATG AAGAAATCGA GGATGAGTTA 
TCTGATGAAG AAATCAAGAG CGAACAATCT GAAAATGAAC CAAACAAAGA AGATATCAAC 
AATGAAGAAA TCGAGGATGA GTTATCTGAT GAAGAAATCA AGAGCGAACT ATCTGAAAAT 
GAACCAAACA AAGAAGATAT CAACAATGAA GAAATAGAGG ATGAGTTATC TGATGAAGAA 
TCCGTCAAAG AGGAAATGGA TTTGGACCAA ATTAGTGACG ACAATGAAAA AGAAGAGAAA 
GACTTTTTAT ACAACAGAGG TTTAGATTTT CGCAATGTAA GTTGTGTTAT TAATTTTAAC 
ATGCCATTAG ATAAAGAAAC CTTTTTACAT AGAATAGGAA GAACTTGCAG ATTAAATACG 
AAAGGTATAA GTATATCATT TGTAGATGAA AATAAAGAAA TTGAAAAAAG TATTGTTAAA 
GAAATTGAGA ATGATAATAT ATGTTATATG AAAAAAAAAA ATATGAATTT TAATAGTATT 
GAAACTTATA GGTATAGAGT TGAATCAACT TTGAATAAAT GCACACAAAA AAAAATAAAT 
TTATTTATTC AAAAAGAAAT ACTATATCAT TCATTAAAAT CCAATGAATT AAAAGAATTT 
TTTAATTCAC ATGCAAGTGA AAAAAGAAAA ATTAACAAAA TTATAAAACG TTTTAATAAG 
CAAATTATTT CACAAAAATT TATTAAAGAT AGGAATGAAA GTATATTCTT AAAAAAAATG 
ACCCCTAGCA ATACAATCAA AAAAAATGAA AGTTTTGACA AAAGAAGCAA AAATAATAAC 
CGAGGTATGC AACACATTGA AAAGAGAAAA AGGGGTTTTG CCATAACTCA AAAAGGTTAT 
GAAGACCAAT TAAAGAAAGA ACCCAATGAA GAAGTTACAG ACCCTACTAA GTTGCCTGCT 
TTGTTTGGTA AGCGACTAAG AAATTATATG TATATGAAAT ATATAAACAA CAAAAAAAAA 
AGTACACTTG ACAACGATGC GCGCCAAAAT CGTTTTAACG GTAAATATTC GAATCGTAAT 
AAAAAAGGTT TTAAAAATAA TAAATTTTCC AAAAAAAATA AATTCACAAA AACAAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022714132.1
CDS	1..2580
Translation	MDQEDGPQNEVEEGAPEEIKEEVYTEEVAEEVEKEEEAGEAEDEADEEAEGEDDDEGEINEDDDKAPSKMKVKNNTEEIFFDVSNNFEGFDNILLDVRLRKALLYIFKFKHPTKIQKVSIPSILKGNDTILNAKTGSGKTMAYLIPAIQRLIKFNIDEKEHLKFFYKCIIIAPTEELCLQIYNVGDKLCSYLKGIVTINHNVNNIFYEHPTILVSTPKHLCNYILEHKNKNNQNILSNLKILIIDEADVIHTKEFQKPMYTLTRNYLPKNFSKKYQIIMASATLKKNIIEKTNLFLHKPIYLTTEEDKKTTEKKSKKHPIDSQIVESSKKSRNNKTVNNEGVIYQGNDDVDATNFKFVGKSFYYLYDEELTKYIYLYLLIKNKTVKFKSIIFTASTADAYKIKIFLTYLNITSSILNPNHPILIKQNIILSFNSSKFYFLICPQFERNTVRTSPKESVNVDLSEDEPTMEELTDEKLKSELSENEPTKEDINNEEIEDELSDEEIKSEQSENEPNKEDINNEEIEDELSDEEIKSELSENEPNKEDINNEEIEDELSDEESVKEEMDLDQISDDNEKEEKDFLYNRGLDFRNVSCVINFNMPLDKETFLHRIGRTCRLNTKGISISFVDENKEIEKSIVKEIENDNICYMKKKNMNFNSIETYRYRVESTLNKCTQKKINLFIQKEILYHSLKSNELKEFFNSHASEKRKINKIIKRFNKQIISQKFIKDRNESIFLKKMTPSNTIKKNESFDKRSKNNNRGMQHIEKRKRGFAITQKGYEDQLKKEPNEEVTDPTKLPALFGKRLRNYMYMKYINNKKKSTLDNDARQNRFNGKYSNRNKKGFKNNKFSKKNKFTKTK

Target ORF information:

RefSeq Version	XM_022858300.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA DEAD/DEAH box ATP-dependent RNA helicase, putative (PBANKA_145520), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022858300.1

ORF Insert Sequence:

ATGGATCAGG AGGATGGGCC CCAGAATGAA GTCGAGGAAG GAGCGCCAGA AGAAATAAAA 
GAAGAGGTAT ATACAGAAGA AGTAGCAGAA GAAGTAGAAA AAGAAGAAGA AGCAGGAGAA 
GCAGAAGATG AAGCAGATGA AGAAGCAGAA GGCGAGGATG ATGACGAAGG AGAAATAAAT 
GAAGACGATG ACAAAGCCCC AAGCAAGATG AAAGTCAAAA ATAATACGGA AGAAATATTC 
TTTGATGTAA GTAACAATTT TGAGGGGTTC GACAATATTT TGTTAGATGT GAGACTAAGG 
AAAGCATTGC TTTATATATT TAAATTCAAG CATCCGACAA AAATTCAAAA AGTTTCAATT 
CCAAGTATAT TAAAAGGTAA TGACACAATT TTAAATGCAA AAACAGGGTC TGGGAAAACA 
ATGGCCTATT TGATTCCAGC AATTCAGCGA TTGATAAAGT TCAACATCGA CGAAAAAGAA 
CATTTAAAAT TTTTTTATAA ATGTATAATT ATAGCCCCAA CAGAAGAACT ATGCTTACAA 
ATATATAATG TGGGTGATAA ATTATGCTCA TATTTAAAAG GAATAGTAAC AATTAACCAT 
AATGTAAATA ATATTTTTTA TGAGCATCCT ACTATACTTG TAAGTACTCC TAAACATTTA 
TGTAACTATA TATTAGAACA CAAAAATAAA AATAACCAAA ATATATTATC CAATTTAAAA 
ATATTAATTA TTGATGAGGC AGATGTAATT CATACAAAAG AATTCCAAAA GCCAATGTAT 
ACACTAACAC GCAATTATTT ACCAAAAAAT TTTTCAAAAA AATATCAAAT TATTATGGCT 
TCAGCTACTT TAAAAAAAAA TATTATAGAA AAAACTAATC TATTTTTGCA TAAGCCAATT 
TATTTAACTA CTGAAGAGGA TAAAAAAACA ACTGAAAAGA AAAGTAAGAA GCATCCTATT 
GATAGTCAAA TTGTAGAAAG TTCTAAAAAA AGTCGAAACA ATAAGACTGT AAATAATGAA 
GGTGTAATAT ATCAGGGAAA TGATGACGTC GATGCAACAA ATTTTAAATT TGTTGGAAAA 
TCCTTTTATT ATCTTTATGA CGAGGAATTA ACAAAGTACA TTTATCTATA TTTATTGATA 
AAAAATAAAA CGGTCAAATT TAAATCAATA ATATTTACGG CATCGACAGC AGATGCGTAT 
AAAATAAAAA TATTTTTAAC ATATCTAAAC ATCACATCTT CTATACTTAA TCCAAATCAT 
CCTATTTTGA TCAAGCAAAA TATTATTTTG TCATTCAACA GTTCAAAATT TTATTTCTTA 
ATATGTCCGC AGTTTGAAAG AAACACGGTT CGCACTTCCC CCAAGGAATC AGTAAATGTC 
GATTTATCTG AAGATGAACC AACCATGGAA GAACTAACCG ATGAGAAACT CAAGAGCGAA 
CTATCTGAAA ATGAACCAAC CAAAGAAGAT ATCAACAATG AAGAAATCGA GGATGAGTTA 
TCTGATGAAG AAATCAAGAG CGAACAATCT GAAAATGAAC CAAACAAAGA AGATATCAAC 
AATGAAGAAA TCGAGGATGA GTTATCTGAT GAAGAAATCA AGAGCGAACT ATCTGAAAAT 
GAACCAAACA AAGAAGATAT CAACAATGAA GAAATAGAGG ATGAGTTATC TGATGAAGAA 
TCCGTCAAAG AGGAAATGGA TTTGGACCAA ATTAGTGACG ACAATGAAAA AGAAGAGAAA 
GACTTTTTAT ACAACAGAGG TTTAGATTTT CGCAATGTAA GTTGTGTTAT TAATTTTAAC 
ATGCCATTAG ATAAAGAAAC CTTTTTACAT AGAATAGGAA GAACTTGCAG ATTAAATACG 
AAAGGTATAA GTATATCATT TGTAGATGAA AATAAAGAAA TTGAAAAAAG TATTGTTAAA 
GAAATTGAGA ATGATAATAT ATGTTATATG AAAAAAAAAA ATATGAATTT TAATAGTATT 
GAAACTTATA GGTATAGAGT TGAATCAACT TTGAATAAAT GCACACAAAA AAAAATAAAT 
TTATTTATTC AAAAAGAAAT ACTATATCAT TCATTAAAAT CCAATGAATT AAAAGAATTT 
TTTAATTCAC ATGCAAGTGA AAAAAGAAAA ATTAACAAAA TTATAAAACG TTTTAATAAG 
CAAATTATTT CACAAAAATT TATTAAAGAT AGGAATGAAA GTATATTCTT AAAAAAAATG 
ACCCCTAGCA ATACAATCAA AAAAAATGAA AGTTTTGACA AAAGAAGCAA AAATAATAAC 
CGAGGTATGC AACACATTGA AAAGAGAAAA AGGGGTTTTG CCATAACTCA AAAAGGTTAT 
GAAGACCAAT TAAAGAAAGA ACCCAATGAA GAAGTTACAG ACCCTACTAA GTTGCCTGCT 
TTGTTTGGTA AGCGACTAAG AAATTATATG TATATGAAAT ATATAAACAA CAAAAAAAAA 
AGTACACTTG ACAACGATGC GCGCCAAAAT CGTTTTAACG GTAAATATTC GAATCGTAAT 
AAAAAAGGTT TTAAAAATAA TAAATTTTCC AAAAAAAATA AATTCACAAA AACAAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000039.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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