PB000406.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000406.00.0
Entrez Gene ID	3425506
Full Name	conserved Plasmodium protein, unknown function
Synonyms	PB000406.00.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_022858166.1	XP_022714011.1	conserved Plasmodium protein, unknown function
XM_671894.1	XP_676986.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000406.00.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000406.00.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07561	XM_022858166.1 Latest version!	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_143410), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000406.00.0 ( XM_022858166.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022714011.1 Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_143410), partial mRNA.

Price & Availability↑

CloneID	OPm07561
Clone ID Related Accession (Same CDS sequence)	XM_022858166.1
Accession Version	XM_022858166.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3426bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	conserved Plasmodium protein, unknown function
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). COMPLETENESS: incomplete on both ends.

ATGGAGCATG GAAATGTGGG AGATAAAATT TTCGACTTGA ATTCAATCAG TCGAGAGATG 
CTAGAGTTAG TGGAAGTTTT TTATGATAAA ATGAAAGAAA CAACAAATGC AAATGCATTA 
TATTTATATG CTTTACAAAT ATTTAAAATA TGTAACATCC ATAACGAATT ACCAAGATTA 
GTTGTTTTTG GCCAACAATC AATGGGGAAA ACGACACTTT TAGATTTTAT TATGGGAGGC 
CCAATGGGAT ATACAAGTTC TGATACAGGA ACTAAGCAAC CTATAGTTAT AATATTAAAA 
CCTAGTGATA CAAACAAAAT AGAATGTTAT TTAAATAAAA AAAAAGTAAA CATAGATGAC 
TTACATGAAA AAATGAAAGC TATTATGCTT AATTTAAATG AATCTATTAT ATCTAAAGAG 
TTAGAAGTAG AAATATCTAT ACCTGGTGGT ATATATGCTA CTTTTGTTGA TTTACCTGGT 
ATTAAAGATG ATTCAAAAGC TGGTTCAGAA TTAACGCGAA AAATTGTTCG TAATTATGTT 
CAAAACTTTC CAAATGACAT TTATATATTA GTAAAAAAAG CATCTGATGA TCCTGCCAAT 
TGGCCTTATC ATTTGAAAGA GTTCTTTATG AAACCCAAAC CTTTAGGTCT TGGATTACAA 
ACCAAACAGT GCATTGTTGT TGGAACAAGG GCTTTGGAAT TTTTGAATAA TGAACTTAGT 
ACTATCAAAA CTTTGACAGA ACTACATGAT CGAGTAAAAA AGAGAGGTAT TTCGGATAAT 
AATGATAACA TGTTATCTTT ATATTTATTG GAACTTTTTT CGATACCTAT TGAGCAAAAG 
GAGAAAAACG ATTTTTTAAC AAATAGAATA TCTATGTATT CTAAAATATT AAATGGTAGA 
AAAAATGTGT TAGATTTATT GTTAAATAAA TTTGAAAATG ATTGTAGTGA TTCAATAAAA 
AAAGAATTGA TTGATTGTTT TGATGTTGAA AAATTTAAAC AAGAAGTAAA CAGCAAATTT 
ATGAATATAT TAATACAACA ATTAAGGAAG GTTGAGGTAA AATTAGAAAA AAAAAAAGCA 
AAAATGGAAA TATATATTAA AAAATTAGAA GAATTATATA ATAAAGGTAA TATTCTAAGT 
ATTAGAGAGC AAGTCAAATT ATATATACGT GAACTTGTTA ATATTATATC AAATTTATTA 
ACAGGAAATT ATCCAATATT AAATTTACCA AAAAATGGAG ATGATTTTTT AAAAAAATAT 
GGTGGAACAT TAATGGAAAA TTTAAAAGAC GGAAATGATT TGGCTGTTGA ATTATATGAA 
AAGCAAGGTT TATATGATGA AAATTTTTTA ACTTATTTAA ATGAGTATTT AATAAAGCAA 
TCAAACGAAA ACGAATATAA TAAATCAGTT ACTTCTGATT TTAATAACTG TAACGATTTG 
TTAAATAATT TAAATTCAAG TATTGATGAT ATAAAAATTG GTAATAATAT AACTACGAAT 
ACCGTAAACA CTAATAGCAT GATAGGAGGA ATACATAATG GAAACAATAT TGGAAATAGT 
GGAAACGCAA GTAATAATAT ATCGAGTAAT AGTTCAAATA CAAATAATAT TAATAACTTA 
AATAGTAGCA CAAATAGTAA TGCGAATTTT AGTAACTCAG GGATAAATAT TTCAGGCTTT 
GGAACTAATA GCATGGGAAC TGCAAATAAT AACATAAATA ATAGTGGAAT TGGAAAAAAT 
AATAATAGTA GTAGCAGTAA TAATAATTCG AATATTAACT CGTTAAATAA ACGATCTGAT 
ATTTATGACA ACTTTAATGA TAGGGATAAA AAACGAACAA ATGACAATAT GTTGAAAATA 
GGACAAACTG TACGTTTTCT TTTAGCAAAA GAAGAAAGCA GTATGTTTGG AATTATCCAA 
AATATTTCAA ACGATGCTCG AAGTAAAAAT ATTTTAGTAA ATTTTTTTTT CCGTAGTAGT 
AATATTGAAG AGCAAATACA AGTAAAATCT GTTGAAAAGG AAAGATTAAT AGTTGTAAAA 
CCTGTAGAAA CATTAAGTGG GGATTTATTT TTTTTAAATG GTTTACAAGT ATGGTATAAA 
ATGACAAGAG ATGATGGGTG GGTTGGTTTT GATAACGCAG AAATCATCAA AGTATTTAAT 
AACAGTAGTA AAATTAAAGA TGTATTAATT AGAAATTTGT CAAAAAATAA TGAAGTTGTA 
TCAATCAAAA TTAATGATTT ATATGCAGAT TATACTGATC ATATGGATGA CGAAGCTGAT 
CCAATAGATG AAACATATAA TGAAGATGAT GCCCTTAAAA AAGTTGCTGG ACCACATACT 
GATTTGAAAA TATTGAATCA ATTGGCTATT ACATATATAT GTAAATGGCT TAAATATAAT 
ATTGCTAAAA TAGAACCAGA AAAAAAATTT TCAGATGAAG TATTATTACA AATGATGAGA 
AGTATACACA ATATTGTTGA TCAAAGTGAT TGGAAACCAT TAGTAGTAGA TTTATTACAA 
GCAAACATAA GTGGCAACAT TTTATATTTA ACAAAGCTAG CTAGCTGTTC AGCAGCTGTA 
GCATTAAATA GAGTATTTAA AGCTGGACTC GGAGAAATTA ATAGAAAAAT TAAAAATAAT 
TATATAGATG AAAATATATA CCTATTAAGT ACAAATCCAA AATTTCTTGA AGAGTTAAAT 
CAAGCATTAC ATAATTTTTG TAAAGAAAGA GCAGTCATAT GTGCAAGTGA AATGAAAGAA 
ATCGTTTTTG AACAAACATA TGCAGTACAT TTTGAAATTA TTGAAGAAAT ATTTGAGGGA 
TGTAAATTAT TTGAGGATAA TTTTCTTACA CCTACAGGTG TTAAGCCAAC AATGTCAATA 
ATCAACAAAA ATGTTAAACA AAATTTAGCT TATAGAAATC ACCAATTGTC ATTGACAGAT 
GTTAAAATTA ATAAAAAATC TAGATCTAAA GAATTAATAC AAGAAGAAGT CAAACTACAA 
TTCTGGGCAA TCAAAATGTT AATATCTGTT CCGTTTGCCA CCAAAATCTA TGCACATTTT 
TTGAACAACA TAGTCCCAAA AAATAAGCAT CTTGCAAATA TTCTTGATTA CTCAATTGAT 
TGTGAGAGCA ACTTAGAGAA ATACATTCAA AGCAAATTGC TAAATCGGGA AGTCAACGGA 
ATTCAGGTTC CAATAGATGA TAAAGAACTT TTAAGTCACT ACAACATTAT AGACAACCGA 
GACAATATTC TCAGAAAACT TGAAAACCAA AAACGACTCA TTCAATACAT ATCTATTGTA 
TCTAATTCTA TAAAACTTCT TAAAAATAAT TTATCAAATG AAAGTACACT GGATTTTGTA 
ACAAAATTGG ATTTTGGCCA AGAAAATAAA AAAAATTGGC ATAGATTAGA TTCATACGAG 
GACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022714011.1
CDS	1..3426
Translation	MEHGNVGDKIFDLNSISREMLELVEVFYDKMKETTNANALYLYALQIFKICNIHNELPRLVVFGQQSMGKTTLLDFIMGGPMGYTSSDTGTKQPIVIILKPSDTNKIECYLNKKKVNIDDLHEKMKAIMLNLNESIISKELEVEISIPGGIYATFVDLPGIKDDSKAGSELTRKIVRNYVQNFPNDIYILVKKASDDPANWPYHLKEFFMKPKPLGLGLQTKQCIVVGTRALEFLNNELSTIKTLTELHDRVKKRGISDNNDNMLSLYLLELFSIPIEQKEKNDFLTNRISMYSKILNGRKNVLDLLLNKFENDCSDSIKKELIDCFDVEKFKQEVNSKFMNILIQQLRKVEVKLEKKKAKMEIYIKKLEELYNKGNILSIREQVKLYIRELVNIISNLLTGNYPILNLPKNGDDFLKKYGGTLMENLKDGNDLAVELYEKQGLYDENFLTYLNEYLIKQSNENEYNKSVTSDFNNCNDLLNNLNSSIDDIKIGNNITTNTVNTNSMIGGIHNGNNIGNSGNASNNISSNSSNTNNINNLNSSTNSNANFSNSGINISGFGTNSMGTANNNINNSGIGKNNNSSSSNNNSNINSLNKRSDIYDNFNDRDKKRTNDNMLKIGQTVRFLLAKEESSMFGIIQNISNDARSKNILVNFFFRSSNIEEQIQVKSVEKERLIVVKPVETLSGDLFFLNGLQVWYKMTRDDGWVGFDNAEIIKVFNNSSKIKDVLIRNLSKNNEVVSIKINDLYADYTDHMDDEADPIDETYNEDDALKKVAGPHTDLKILNQLAITYICKWLKYNIAKIEPEKKFSDEVLLQMMRSIHNIVDQSDWKPLVVDLLQANISGNILYLTKLASCSAAVALNRVFKAGLGEINRKIKNNYIDENIYLLSTNPKFLEELNQALHNFCKERAVICASEMKEIVFEQTYAVHFEIIEEIFEGCKLFEDNFLTPTGVKPTMSIINKNVKQNLAYRNHQLSLTDVKINKKSRSKELIQEEVKLQFWAIKMLISVPFATKIYAHFLNNIVPKNKHLANILDYSIDCESNLEKYIQSKLLNREVNGIQVPIDDKELLSHYNIIDNRDNILRKLENQKRLIQYISIVSNSIKLLKNNLSNESTLDFVTKLDFGQENKKNWHRLDSYED

Target ORF information:

RefSeq Version	XM_022858166.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA conserved Plasmodium protein, unknown function (PBANKA_143410), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022858166.1

ORF Insert Sequence:

ATGGAGCATG GAAATGTGGG AGATAAAATT TTCGACTTGA ATTCAATCAG TCGAGAGATG 
CTAGAGTTAG TGGAAGTTTT TTATGATAAA ATGAAAGAAA CAACAAATGC AAATGCATTA 
TATTTATATG CTTTACAAAT ATTTAAAATA TGTAACATCC ATAACGAATT ACCAAGATTA 
GTTGTTTTTG GCCAACAATC AATGGGGAAA ACGACACTTT TAGATTTTAT TATGGGAGGC 
CCAATGGGAT ATACAAGTTC TGATACAGGA ACTAAGCAAC CTATAGTTAT AATATTAAAA 
CCTAGTGATA CAAACAAAAT AGAATGTTAT TTAAATAAAA AAAAAGTAAA CATAGATGAC 
TTACATGAAA AAATGAAAGC TATTATGCTT AATTTAAATG AATCTATTAT ATCTAAAGAG 
TTAGAAGTAG AAATATCTAT ACCTGGTGGT ATATATGCTA CTTTTGTTGA TTTACCTGGT 
ATTAAAGATG ATTCAAAAGC TGGTTCAGAA TTAACGCGAA AAATTGTTCG TAATTATGTT 
CAAAACTTTC CAAATGACAT TTATATATTA GTAAAAAAAG CATCTGATGA TCCTGCCAAT 
TGGCCTTATC ATTTGAAAGA GTTCTTTATG AAACCCAAAC CTTTAGGTCT TGGATTACAA 
ACCAAACAGT GCATTGTTGT TGGAACAAGG GCTTTGGAAT TTTTGAATAA TGAACTTAGT 
ACTATCAAAA CTTTGACAGA ACTACATGAT CGAGTAAAAA AGAGAGGTAT TTCGGATAAT 
AATGATAACA TGTTATCTTT ATATTTATTG GAACTTTTTT CGATACCTAT TGAGCAAAAG 
GAGAAAAACG ATTTTTTAAC AAATAGAATA TCTATGTATT CTAAAATATT AAATGGTAGA 
AAAAATGTGT TAGATTTATT GTTAAATAAA TTTGAAAATG ATTGTAGTGA TTCAATAAAA 
AAAGAATTGA TTGATTGTTT TGATGTTGAA AAATTTAAAC AAGAAGTAAA CAGCAAATTT 
ATGAATATAT TAATACAACA ATTAAGGAAG GTTGAGGTAA AATTAGAAAA AAAAAAAGCA 
AAAATGGAAA TATATATTAA AAAATTAGAA GAATTATATA ATAAAGGTAA TATTCTAAGT 
ATTAGAGAGC AAGTCAAATT ATATATACGT GAACTTGTTA ATATTATATC AAATTTATTA 
ACAGGAAATT ATCCAATATT AAATTTACCA AAAAATGGAG ATGATTTTTT AAAAAAATAT 
GGTGGAACAT TAATGGAAAA TTTAAAAGAC GGAAATGATT TGGCTGTTGA ATTATATGAA 
AAGCAAGGTT TATATGATGA AAATTTTTTA ACTTATTTAA ATGAGTATTT AATAAAGCAA 
TCAAACGAAA ACGAATATAA TAAATCAGTT ACTTCTGATT TTAATAACTG TAACGATTTG 
TTAAATAATT TAAATTCAAG TATTGATGAT ATAAAAATTG GTAATAATAT AACTACGAAT 
ACCGTAAACA CTAATAGCAT GATAGGAGGA ATACATAATG GAAACAATAT TGGAAATAGT 
GGAAACGCAA GTAATAATAT ATCGAGTAAT AGTTCAAATA CAAATAATAT TAATAACTTA 
AATAGTAGCA CAAATAGTAA TGCGAATTTT AGTAACTCAG GGATAAATAT TTCAGGCTTT 
GGAACTAATA GCATGGGAAC TGCAAATAAT AACATAAATA ATAGTGGAAT TGGAAAAAAT 
AATAATAGTA GTAGCAGTAA TAATAATTCG AATATTAACT CGTTAAATAA ACGATCTGAT 
ATTTATGACA ACTTTAATGA TAGGGATAAA AAACGAACAA ATGACAATAT GTTGAAAATA 
GGACAAACTG TACGTTTTCT TTTAGCAAAA GAAGAAAGCA GTATGTTTGG AATTATCCAA 
AATATTTCAA ACGATGCTCG AAGTAAAAAT ATTTTAGTAA ATTTTTTTTT CCGTAGTAGT 
AATATTGAAG AGCAAATACA AGTAAAATCT GTTGAAAAGG AAAGATTAAT AGTTGTAAAA 
CCTGTAGAAA CATTAAGTGG GGATTTATTT TTTTTAAATG GTTTACAAGT ATGGTATAAA 
ATGACAAGAG ATGATGGGTG GGTTGGTTTT GATAACGCAG AAATCATCAA AGTATTTAAT 
AACAGTAGTA AAATTAAAGA TGTATTAATT AGAAATTTGT CAAAAAATAA TGAAGTTGTA 
TCAATCAAAA TTAATGATTT ATATGCAGAT TATACTGATC ATATGGATGA CGAAGCTGAT 
CCAATAGATG AAACATATAA TGAAGATGAT GCCCTTAAAA AAGTTGCTGG ACCACATACT 
GATTTGAAAA TATTGAATCA ATTGGCTATT ACATATATAT GTAAATGGCT TAAATATAAT 
ATTGCTAAAA TAGAACCAGA AAAAAAATTT TCAGATGAAG TATTATTACA AATGATGAGA 
AGTATACACA ATATTGTTGA TCAAAGTGAT TGGAAACCAT TAGTAGTAGA TTTATTACAA 
GCAAACATAA GTGGCAACAT TTTATATTTA ACAAAGCTAG CTAGCTGTTC AGCAGCTGTA 
GCATTAAATA GAGTATTTAA AGCTGGACTC GGAGAAATTA ATAGAAAAAT TAAAAATAAT 
TATATAGATG AAAATATATA CCTATTAAGT ACAAATCCAA AATTTCTTGA AGAGTTAAAT 
CAAGCATTAC ATAATTTTTG TAAAGAAAGA GCAGTCATAT GTGCAAGTGA AATGAAAGAA 
ATCGTTTTTG AACAAACATA TGCAGTACAT TTTGAAATTA TTGAAGAAAT ATTTGAGGGA 
TGTAAATTAT TTGAGGATAA TTTTCTTACA CCTACAGGTG TTAAGCCAAC AATGTCAATA 
ATCAACAAAA ATGTTAAACA AAATTTAGCT TATAGAAATC ACCAATTGTC ATTGACAGAT 
GTTAAAATTA ATAAAAAATC TAGATCTAAA GAATTAATAC AAGAAGAAGT CAAACTACAA 
TTCTGGGCAA TCAAAATGTT AATATCTGTT CCGTTTGCCA CCAAAATCTA TGCACATTTT 
TTGAACAACA TAGTCCCAAA AAATAAGCAT CTTGCAAATA TTCTTGATTA CTCAATTGAT 
TGTGAGAGCA ACTTAGAGAA ATACATTCAA AGCAAATTGC TAAATCGGGA AGTCAACGGA 
ATTCAGGTTC CAATAGATGA TAAAGAACTT TTAAGTCACT ACAACATTAT AGACAACCGA 
GACAATATTC TCAGAAAACT TGAAAACCAA AAACGACTCA TTCAATACAT ATCTATTGTA 
TCTAATTCTA TAAAACTTCT TAAAAATAAT TTATCAAATG AAAGTACACT GGATTTTGTA 
ACAAAATTGG ATTTTGGCCA AGAAAATAAA AAAAATTGGC ATAGATTAGA TTCATACGAG 
GACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000406.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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