LOC100384369 cDNA ORF clone, Zea mays

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100384369
Entrez Gene ID	100384369
Full Name	CwfJ-like family protein
Synonyms	GRMZM2G301071
Gene Type	protein-coding
Organism	Zea mays

mRNA and Protein(s)

mRNA	Protein	Name
XM_008648067.2	XP_008646289.1	uncharacterized protein LOC100384369 isoform X1
NM_001176914.1	NP_001170385.1	uncharacterized protein LOC100384369
NM_001357634.1	NP_001344563.1	uncharacterized protein LOC100384369

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)

Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC100384369 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100384369 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OZa19224	NM_001176914.1 Latest version!	Zea mays CwfJ-like family protein (LOC100384369), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
OZa31041	NM_001357634.1 Latest version!	Zea mays CwfJ-like family protein (LOC100384369), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
OZa31041	XM_008648067.2 Latest version!	Zea mays CwfJ-like family protein (LOC100384369), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100384369 ( NM_001176914.1 ) cDNA ORF clone, Zea mays -> NP_001170385.1 Zea mays CwfJ-like family protein (LOC100384369), mRNA.

Price & Availability↑

CloneID	OZa19224
Clone ID Related Accession (Same CDS sequence)	NM_001176914.1
Accession Version	NM_001176914.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 696bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1492531200000
Organism	Zea mays
Product	uncharacterized protein LOC100384369
Comment	PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT069926.1. ##Evidence-Data-START## Transcript exon combination :: BT069926.1, FL065551.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END##

ATGTTGACTC AGAAGGAGCG TTGTATGTAT TGCTTTGAGA ACCCATCCAG GCCAAAACAT 
CTGGTTGTTG CTATTGGAAA CTTCAGCTAC TTGATGCTGC CACAGTTTGA GCCTGTTGTT 
CCTGGGCACT GTATTATTCT CCCATTACAG CATGAATCTG GAACGAGAAC AGTTGATCAG 
AATGTTTGGG GGGAGATCCG CAACTTCAAG AAGTGTCTGC TGAAGATGTT TGCACAGCAG 
GACAAGGATG TGTTGTTTAT GGAGACTGTC ATAAGCCTGG CCAGACAACG GAGACACTGC 
ATGATTGAGT GCATCCCTGT CCCTTGTGAA GTGTCAAGCA ATGCCCCAAT GTACTTCAAA 
AAGGCTATTG ATGAAGCTGA AGAAGAATGG ACCCAACATG AGATGAAGAA GGTTATCCCG 
ACAAGTGCAA GCCGCAACTT GAGGCAAGTC ATCCCGGAGA ACTTTGCCTA CTTCCATGTG 
GAGTTCGGGC TGGACCGTGG CTTTGTTCAT GTAATAGATG ACGAGAGCAA GTTCAGTGCT 
GGATTTGGAT TGAATGTCAT TAGAGGGATG CTCCAGTTGC CAGAGGAGGA CATGCACCGT 
CGACGAAGGC ACGAGTCCAT GGATAACCAG AGGCAGGCTG TTGCTAGCTT CATGAAAGAT 
TGGGAGCCCT TCGATTGGAC GAAGCAACTT GATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001170385.1
CDS	102..797
Translation	MLTQKERCMYCFENPSRPKHLVVAIGNFSYLMLPQFEPVVPGHCIILPLQHESGTRTVDQNVWGEIRNFKKCLLKMFAQQDKDVLFMETVISLARQRRHCMIECIPVPCEVSSNAPMYFKKAIDEAEEEWTQHEMKKVIPTSASRNLRQVIPENFAYFHVEFGLDRGFVHVIDDESKFSAGFGLNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD

Target ORF information:

RefSeq Version	NM_001176914.1
Organism	Zea mays
Definition	Zea mays CwfJ-like family protein (LOC100384369), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001176914.1

ORF Insert Sequence:

ATGTTGACTC AGAAGGAGCG TTGTATGTAT TGCTTTGAGA ACCCATCCAG GCCAAAACAT 
CTGGTTGTTG CTATTGGAAA CTTCAGCTAC TTGATGCTGC CACAGTTTGA GCCTGTTGTT 
CCTGGGCACT GTATTATTCT CCCATTACAG CATGAATCTG GAACGAGAAC AGTTGATCAG 
AATGTTTGGG GGGAGATCCG CAACTTCAAG AAGTGTCTGC TGAAGATGTT TGCACAGCAG 
GACAAGGATG TGTTGTTTAT GGAGACTGTC ATAAGCCTGG CCAGACAACG GAGACACTGC 
ATGATTGAGT GCATCCCTGT CCCTTGTGAA GTGTCAAGCA ATGCCCCAAT GTACTTCAAA 
AAGGCTATTG ATGAAGCTGA AGAAGAATGG ACCCAACATG AGATGAAGAA GGTTATCCCG 
ACAAGTGCAA GCCGCAACTT GAGGCAAGTC ATCCCGGAGA ACTTTGCCTA CTTCCATGTG 
GAGTTCGGGC TGGACCGTGG CTTTGTTCAT GTAATAGATG ACGAGAGCAA GTTCAGTGCT 
GGATTTGGAT TGAATGTCAT TAGAGGGATG CTCCAGTTGC CAGAGGAGGA CATGCACCGT 
CGACGAAGGC ACGAGTCCAT GGATAACCAG AGGCAGGCTG TTGCTAGCTT CATGAAAGAT 
TGGGAGCCCT TCGATTGGAC GAAGCAACTT GATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100384369 ( NM_001357634.1 ) cDNA ORF clone, Zea mays -> NP_001344563.1 Zea mays CwfJ-like family protein (LOC100384369), mRNA.

Price & Availability↑

CloneID	OZa31041
Clone ID Related Accession (Same CDS sequence)	XM_008648067.2 , NM_001357634.1
Accession Version	NM_001357634.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1509638400000
Organism	Zea mays
Product	uncharacterized protein LOC100384369
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE295093.2, FL446434.1, FL459998.1, LPUQ01001214.1, EU945103.1, BT069926.1 and FL445253.1. On Nov 4, 2017 this sequence version replaced XM_008648067.2. ##Evidence-Data-START## Transcript exon combination :: GECS01009477.1, SRR3147030.174.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END##

ATGCTGTCTG GCGTGAAGCT GGTTCCGCGA GACCAGATCC AGTCTGATCA GAAGCGTAGG 
GGTGACCAGG GCTCCGATTC CGACTCCTCC GACGGCAAGA GGCCGTGGAA GCACAGTAAA 
AGAGGGCGGG ACAAGAAAGA GAAGAAGAGA CGAAGCAGCC GGCGGCAGCG GAGGCGGAGC 
AAGAGGTACT CGTCGGAAGA TTCTTTGGGG TCAGACACCG ACGATTCAAT CGGAGAGGAA 
GAGGAGGATG ATGTCAGTCG GAGCAAGCGT CGCGGGAAGG ACAGGAGGCG GCGACGCAAC 
TTCTCTGACG ACGATGATTC CGAATCCGGC GAATCTGACC GGGGAAGAGC CTCTCGCAGG 
GGGAAGCAGA GACGTGATGA CGAGGATGAG GAGGAAGAGA CTGAAGGTGA TGGGCTTAGG 
GCAAGTGAGG TGGTCAGGAG GGAGATGGGG CTTGAATGGA TGCTCAAGCC AGCAAGCAGC 
AGCCAAACTG AGGGCACCGG TGTTCGTAAG GTTGATAATG TCGAGAAGGA TGAATCTGCA 
CATGAAGAGA TTATGAGACC GAACCCAAAG GAACTTAACC CATACCTTAA AGATAATGGA 
ACCGGATACC CAGAAGAATC AACCCCATCA AATGCTGGCA GTCAGTTGCT TGCATCCTCT 
GTTGTGGGTG ATGGAGGTGC CAGCTGGAGA CTTAAAGCTT TGAAGCGTGC AAAGGAGCAA 
GCTGCTCGCG AAGGAAGAAA ACTTGAGGAG GTTGTTGAAG AGAGATGGAG CTCATTAGGC 
GACTTAGCTG TTTCAGTATC AGCATCAAGA GCTGCCCATT CACATGCTCA TTTGCATGCC 
ATTAGAGGCA GAAAATCTGG TAATGCTGAC AACTCAGAAG AACGTGTTAA AAGAAATCCA 
GAGGGTCAGC TGGATGGTAG CAGTGGCAGA CGTGAATATC TACGGGATGT TTCTTCTCAG 
CACCATGCCA TGAGAAAACC AAAACCTGAT TCTGTCCCAT GGAAAAAGAG AAGACAGAAT 
ATATCTTCTG AAGATCAGGC ACTTATCTCA TCAGCGGTAG CAAGCTTAAA TAAGTTTTCT 
GATGATGGAA GCTTTATGGA AAAGATTAGC AATGTTGAGA GCAAGAACAC AAATGTTTCC 
ACTGCTAGTG CTAGTGCTGA TGAGCAGAGG GACAATGGGC AGAAAACCCC TAAGGAGAGT 
TCAAACAAAG TACAATTAGT GAGCACTCAG AAACTAAATG CAAACCAGAT GGCTGCAAAG 
ATTCTGCAGC TCCGAATGAA AGGCAAGCAT CAAGAAGCTG AACAACTTTC GAGAGAAATG 
GAAGCTTTGC TGGAGAATCA GGATACTGCC CATGAGAAGC CTGGTCATGG AAAAGAAAGA 
AGCTCAATCA GGCCTACATT GAAGCCTACT GCAGCTGATC ACAGGAGAAG AGAAGATGAT 
GCGGACCTTC ATTTGGCTAA TAAAATTATG CACAACAAGC AGTATAACAT GTCCAAAAGT 
ATAGAAGATG AATATGATTT TGGTGATGCT CCCACTAAAA AGGACAAAAG AAAGAATAAA 
GAAGCACGTG ACGAGAGGAA AAGCACTGAT AGACGTATGT TGACTCAGAA GGAGCGTTGT 
ATGTATTGCT TTGAGAACCC ATCCAGGCCA AAACATCTGG TTGTTGCTAT TGGAAACTTC 
AGCTACTTGA TGCTGCCACA GTTTGAGCCT GTTGTTCCTG GGCACTGTAT TATTCTCCCA 
TTACAGCATG AATCTGGAAC GAGAACAGTT GATCAGAATG TTTGGGGGGA GATCCGCAAC 
TTCAAGAAGT GTCTGCTGAA GATGTTTGCA CAGCAGGACA AGGATGTGTT GTTTATGGAG 
ACTGTCATAA GCCTGGCCAG ACAACGGAGA CACTGCATGA TTGAGTGCAT CCCTGTCCCT 
TGTGAAGTGT CAAGCAATGC CCCAATGTAC TTCAAAAAGG CTATTGATGA AGCTGAAGAA 
GAATGGACCC AACATGAGAT GAAGAAGGTT ATCCCGACAA GTGCAAGCCG CAACTTGAGG 
CAAGTCATCC CGGAGAACTT TGCCTACTTC CATGTGGAGT TCGGGCTGGA CCGTGGCTTT 
GTTCATGTAA TAGATGACGA GAGCAAGTTC AGTGCTGGAT TTGGATTGAA TGTCATTAGA 
GGGATGCTCC AGTTGCCAGA GGAGGACATG CACCGTCGAC GAAGGCACGA GTCCATGGAT 
AACCAGAGGC AGGCTGTTGC TAGCTTCATG AAAGATTGGG AGCCCTTCGA TTGGACGAAG 
CAACTTGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001344563.1
CDS	462..2753
Translation	MLSGVKLVPRDQIQSDQKRRGDQGSDSDSSDGKRPWKHSKRGRDKKEKKRRSSRRQRRRSKRYSSEDSLGSDTDDSIGEEEEDDVSRSKRRGKDRRRRRNFSDDDDSESGESDRGRASRRGKQRRDDEDEEEETEGDGLRASEVVRREMGLEWMLKPASSSQTEGTGVRKVDNVEKDESAHEEIMRPNPKELNPYLKDNGTGYPEESTPSNAGSQLLASSVVGDGGASWRLKALKRAKEQAAREGRKLEEVVEERWSSLGDLAVSVSASRAAHSHAHLHAIRGRKSGNADNSEERVKRNPEGQLDGSSGRREYLRDVSSQHHAMRKPKPDSVPWKKRRQNISSEDQALISSAVASLNKFSDDGSFMEKISNVESKNTNVSTASASADEQRDNGQKTPKESSNKVQLVSTQKLNANQMAAKILQLRMKGKHQEAEQLSREMEALLENQDTAHEKPGHGKERSSIRPTLKPTAADHRRREDDADLHLANKIMHNKQYNMSKSIEDEYDFGDAPTKKDKRKNKEARDERKSTDRRMLTQKERCMYCFENPSRPKHLVVAIGNFSYLMLPQFEPVVPGHCIILPLQHESGTRTVDQNVWGEIRNFKKCLLKMFAQQDKDVLFMETVISLARQRRHCMIECIPVPCEVSSNAPMYFKKAIDEAEEEWTQHEMKKVIPTSASRNLRQVIPENFAYFHVEFGLDRGFVHVIDDESKFSAGFGLNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD

Target ORF information:

RefSeq Version	NM_001357634.1
Organism	Zea mays
Definition	Zea mays CwfJ-like family protein (LOC100384369), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001357634.1

ORF Insert Sequence:

ATGCTGTCTG GCGTGAAGCT GGTTCCGCGA GACCAGATCC AGTCTGATCA GAAGCGTAGG 
GGTGACCAGG GCTCCGATTC CGACTCCTCC GACGGCAAGA GGCCGTGGAA GCACAGTAAA 
AGAGGGCGGG ACAAGAAAGA GAAGAAGAGA CGAAGCAGCC GGCGGCAGCG GAGGCGGAGC 
AAGAGGTACT CGTCGGAAGA TTCTTTGGGG TCAGACACCG ACGATTCAAT CGGAGAGGAA 
GAGGAGGATG ATGTCAGTCG GAGCAAGCGT CGCGGGAAGG ACAGGAGGCG GCGACGCAAC 
TTCTCTGACG ACGATGATTC CGAATCCGGC GAATCTGACC GGGGAAGAGC CTCTCGCAGG 
GGGAAGCAGA GACGTGATGA CGAGGATGAG GAGGAAGAGA CTGAAGGTGA TGGGCTTAGG 
GCAAGTGAGG TGGTCAGGAG GGAGATGGGG CTTGAATGGA TGCTCAAGCC AGCAAGCAGC 
AGCCAAACTG AGGGCACCGG TGTTCGTAAG GTTGATAATG TCGAGAAGGA TGAATCTGCA 
CATGAAGAGA TTATGAGACC GAACCCAAAG GAACTTAACC CATACCTTAA AGATAATGGA 
ACCGGATACC CAGAAGAATC AACCCCATCA AATGCTGGCA GTCAGTTGCT TGCATCCTCT 
GTTGTGGGTG ATGGAGGTGC CAGCTGGAGA CTTAAAGCTT TGAAGCGTGC AAAGGAGCAA 
GCTGCTCGCG AAGGAAGAAA ACTTGAGGAG GTTGTTGAAG AGAGATGGAG CTCATTAGGC 
GACTTAGCTG TTTCAGTATC AGCATCAAGA GCTGCCCATT CACATGCTCA TTTGCATGCC 
ATTAGAGGCA GAAAATCTGG TAATGCTGAC AACTCAGAAG AACGTGTTAA AAGAAATCCA 
GAGGGTCAGC TGGATGGTAG CAGTGGCAGA CGTGAATATC TACGGGATGT TTCTTCTCAG 
CACCATGCCA TGAGAAAACC AAAACCTGAT TCTGTCCCAT GGAAAAAGAG AAGACAGAAT 
ATATCTTCTG AAGATCAGGC ACTTATCTCA TCAGCGGTAG CAAGCTTAAA TAAGTTTTCT 
GATGATGGAA GCTTTATGGA AAAGATTAGC AATGTTGAGA GCAAGAACAC AAATGTTTCC 
ACTGCTAGTG CTAGTGCTGA TGAGCAGAGG GACAATGGGC AGAAAACCCC TAAGGAGAGT 
TCAAACAAAG TACAATTAGT GAGCACTCAG AAACTAAATG CAAACCAGAT GGCTGCAAAG 
ATTCTGCAGC TCCGAATGAA AGGCAAGCAT CAAGAAGCTG AACAACTTTC GAGAGAAATG 
GAAGCTTTGC TGGAGAATCA GGATACTGCC CATGAGAAGC CTGGTCATGG AAAAGAAAGA 
AGCTCAATCA GGCCTACATT GAAGCCTACT GCAGCTGATC ACAGGAGAAG AGAAGATGAT 
GCGGACCTTC ATTTGGCTAA TAAAATTATG CACAACAAGC AGTATAACAT GTCCAAAAGT 
ATAGAAGATG AATATGATTT TGGTGATGCT CCCACTAAAA AGGACAAAAG AAAGAATAAA 
GAAGCACGTG ACGAGAGGAA AAGCACTGAT AGACGTATGT TGACTCAGAA GGAGCGTTGT 
ATGTATTGCT TTGAGAACCC ATCCAGGCCA AAACATCTGG TTGTTGCTAT TGGAAACTTC 
AGCTACTTGA TGCTGCCACA GTTTGAGCCT GTTGTTCCTG GGCACTGTAT TATTCTCCCA 
TTACAGCATG AATCTGGAAC GAGAACAGTT GATCAGAATG TTTGGGGGGA GATCCGCAAC 
TTCAAGAAGT GTCTGCTGAA GATGTTTGCA CAGCAGGACA AGGATGTGTT GTTTATGGAG 
ACTGTCATAA GCCTGGCCAG ACAACGGAGA CACTGCATGA TTGAGTGCAT CCCTGTCCCT 
TGTGAAGTGT CAAGCAATGC CCCAATGTAC TTCAAAAAGG CTATTGATGA AGCTGAAGAA 
GAATGGACCC AACATGAGAT GAAGAAGGTT ATCCCGACAA GTGCAAGCCG CAACTTGAGG 
CAAGTCATCC CGGAGAACTT TGCCTACTTC CATGTGGAGT TCGGGCTGGA CCGTGGCTTT 
GTTCATGTAA TAGATGACGA GAGCAAGTTC AGTGCTGGAT TTGGATTGAA TGTCATTAGA 
GGGATGCTCC AGTTGCCAGA GGAGGACATG CACCGTCGAC GAAGGCACGA GTCCATGGAT 
AACCAGAGGC AGGCTGTTGC TAGCTTCATG AAAGATTGGG AGCCCTTCGA TTGGACGAAG 
CAACTTGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100384369 ( XM_008648067.2 ) cDNA ORF clone, Zea mays -> XP_008646289.1 Zea mays CwfJ-like family protein (LOC100384369), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OZa31041
Clone ID Related Accession (Same CDS sequence)	XM_008648067.2 , NM_001357634.1
Accession Version	XM_008648067.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2292bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1489852800000
Organism	Zea mays
Product	uncharacterized protein LOC100384369 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008648067.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTGTCTG GCGTGAAGCT GGTTCCGCGA GACCAGATCC AGTCTGATCA GAAGCGTAGG 
GGTGACCAGG GCTCCGATTC CGACTCCTCC GACGGCAAGA GGCCGTGGAA GCACAGTAAA 
AGAGGGCGGG ACAAGAAAGA GAAGAAGAGA CGAAGCAGCC GGCGGCAGCG GAGGCGGAGC 
AAGAGGTACT CGTCGGAAGA TTCTTTGGGG TCAGACACCG ACGATTCAAT CGGAGAGGAA 
GAGGAGGATG ATGTCAGTCG GAGCAAGCGT CGCGGGAAGG ACAGGAGGCG GCGACGCAAC 
TTCTCTGACG ACGATGATTC CGAATCCGGC GAATCTGACC GGGGAAGAGC CTCTCGCAGG 
GGGAAGCAGA GACGTGATGA CGAGGATGAG GAGGAAGAGA CTGAAGGTGA TGGGCTTAGG 
GCAAGTGAGG TGGTCAGGAG GGAGATGGGG CTTGAATGGA TGCTCAAGCC AGCAAGCAGC 
AGCCAAACTG AGGGCACCGG TGTTCGTAAG GTTGATAATG TCGAGAAGGA TGAATCTGCA 
CATGAAGAGA TTATGAGACC GAACCCAAAG GAACTTAACC CATACCTTAA AGATAATGGA 
ACCGGATACC CAGAAGAATC AACCCCATCA AATGCTGGCA GTCAGTTGCT TGCATCCTCT 
GTTGTGGGTG ATGGAGGTGC CAGCTGGAGA CTTAAAGCTT TGAAGCGTGC AAAGGAGCAA 
GCTGCTCGCG AAGGAAGAAA ACTTGAGGAG GTTGTTGAAG AGAGATGGAG CTCATTAGGC 
GACTTAGCTG TTTCAGTATC AGCATCAAGA GCTGCCCATT CACATGCTCA TTTGCATGCC 
ATTAGAGGCA GAAAATCTGG TAATGCTGAC AACTCAGAAG AACGTGTTAA AAGAAATCCA 
GAGGGTCAGC TGGATGGTAG CAGTGGCAGA CGTGAATATC TACGGGATGT TTCTTCTCAG 
CACCATGCCA TGAGAAAACC AAAACCTGAT TCTGTCCCAT GGAAAAAGAG AAGACAGAAT 
ATATCTTCTG AAGATCAGGC ACTTATCTCA TCAGCGGTAG CAAGCTTAAA TAAGTTTTCT 
GATGATGGAA GCTTTATGGA AAAGATTAGC AATGTTGAGA GCAAGAACAC AAATGTTTCC 
ACTGCTAGTG CTAGTGCTGA TGAGCAGAGG GACAATGGGC AGAAAACCCC TAAGGAGAGT 
TCAAACAAAG TACAATTAGT GAGCACTCAG AAACTAAATG CAAACCAGAT GGCTGCAAAG 
ATTCTGCAGC TCCGAATGAA AGGCAAGCAT CAAGAAGCTG AACAACTTTC GAGAGAAATG 
GAAGCTTTGC TGGAGAATCA GGATACTGCC CATGAGAAGC CTGGTCATGG AAAAGAAAGA 
AGCTCAATCA GGCCTACATT GAAGCCTACT GCAGCTGATC ACAGGAGAAG AGAAGATGAT 
GCGGACCTTC ATTTGGCTAA TAAAATTATG CACAACAAGC AGTATAACAT GTCCAAAAGT 
ATAGAAGATG AATATGATTT TGGTGATGCT CCCACTAAAA AGGACAAAAG AAAGAATAAA 
GAAGCACGTG ACGAGAGGAA AAGCACTGAT AGACGTATGT TGACTCAGAA GGAGCGTTGT 
ATGTATTGCT TTGAGAACCC ATCCAGGCCA AAACATCTGG TTGTTGCTAT TGGAAACTTC 
AGCTACTTGA TGCTGCCACA GTTTGAGCCT GTTGTTCCTG GGCACTGTAT TATTCTCCCA 
TTACAGCATG AATCTGGAAC GAGAACAGTT GATCAGAATG TTTGGGGGGA GATCCGCAAC 
TTCAAGAAGT GTCTGCTGAA GATGTTTGCA CAGCAGGACA AGGATGTGTT GTTTATGGAG 
ACTGTCATAA GCCTGGCCAG ACAACGGAGA CACTGCATGA TTGAGTGCAT CCCTGTCCCT 
TGTGAAGTGT CAAGCAATGC CCCAATGTAC TTCAAAAAGG CTATTGATGA AGCTGAAGAA 
GAATGGACCC AACATGAGAT GAAGAAGGTT ATCCCGACAA GTGCAAGCCG CAACTTGAGG 
CAAGTCATCC CGGAGAACTT TGCCTACTTC CATGTGGAGT TCGGGCTGGA CCGTGGCTTT 
GTTCATGTAA TAGATGACGA GAGCAAGTTC AGTGCTGGAT TTGGATTGAA TGTCATTAGA 
GGGATGCTCC AGTTGCCAGA GGAGGACATG CACCGTCGAC GAAGGCACGA GTCCATGGAT 
AACCAGAGGC AGGCTGTTGC TAGCTTCATG AAAGATTGGG AGCCCTTCGA TTGGACGAAG 
CAACTTGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008646289.1
CDS	470..2761
Translation	MLSGVKLVPRDQIQSDQKRRGDQGSDSDSSDGKRPWKHSKRGRDKKEKKRRSSRRQRRRSKRYSSEDSLGSDTDDSIGEEEEDDVSRSKRRGKDRRRRRNFSDDDDSESGESDRGRASRRGKQRRDDEDEEEETEGDGLRASEVVRREMGLEWMLKPASSSQTEGTGVRKVDNVEKDESAHEEIMRPNPKELNPYLKDNGTGYPEESTPSNAGSQLLASSVVGDGGASWRLKALKRAKEQAAREGRKLEEVVEERWSSLGDLAVSVSASRAAHSHAHLHAIRGRKSGNADNSEERVKRNPEGQLDGSSGRREYLRDVSSQHHAMRKPKPDSVPWKKRRQNISSEDQALISSAVASLNKFSDDGSFMEKISNVESKNTNVSTASASADEQRDNGQKTPKESSNKVQLVSTQKLNANQMAAKILQLRMKGKHQEAEQLSREMEALLENQDTAHEKPGHGKERSSIRPTLKPTAADHRRREDDADLHLANKIMHNKQYNMSKSIEDEYDFGDAPTKKDKRKNKEARDERKSTDRRMLTQKERCMYCFENPSRPKHLVVAIGNFSYLMLPQFEPVVPGHCIILPLQHESGTRTVDQNVWGEIRNFKKCLLKMFAQQDKDVLFMETVISLARQRRHCMIECIPVPCEVSSNAPMYFKKAIDEAEEEWTQHEMKKVIPTSASRNLRQVIPENFAYFHVEFGLDRGFVHVIDDESKFSAGFGLNVIRGMLQLPEEDMHRRRRHESMDNQRQAVASFMKDWEPFDWTKQLD

Target ORF information:

RefSeq Version	XM_008648067.2
Organism	Zea mays
Definition	Zea mays CwfJ-like family protein (LOC100384369), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008648067.2

ORF Insert Sequence:

ATGCTGTCTG GCGTGAAGCT GGTTCCGCGA GACCAGATCC AGTCTGATCA GAAGCGTAGG 
GGTGACCAGG GCTCCGATTC CGACTCCTCC GACGGCAAGA GGCCGTGGAA GCACAGTAAA 
AGAGGGCGGG ACAAGAAAGA GAAGAAGAGA CGAAGCAGCC GGCGGCAGCG GAGGCGGAGC 
AAGAGGTACT CGTCGGAAGA TTCTTTGGGG TCAGACACCG ACGATTCAAT CGGAGAGGAA 
GAGGAGGATG ATGTCAGTCG GAGCAAGCGT CGCGGGAAGG ACAGGAGGCG GCGACGCAAC 
TTCTCTGACG ACGATGATTC CGAATCCGGC GAATCTGACC GGGGAAGAGC CTCTCGCAGG 
GGGAAGCAGA GACGTGATGA CGAGGATGAG GAGGAAGAGA CTGAAGGTGA TGGGCTTAGG 
GCAAGTGAGG TGGTCAGGAG GGAGATGGGG CTTGAATGGA TGCTCAAGCC AGCAAGCAGC 
AGCCAAACTG AGGGCACCGG TGTTCGTAAG GTTGATAATG TCGAGAAGGA TGAATCTGCA 
CATGAAGAGA TTATGAGACC GAACCCAAAG GAACTTAACC CATACCTTAA AGATAATGGA 
ACCGGATACC CAGAAGAATC AACCCCATCA AATGCTGGCA GTCAGTTGCT TGCATCCTCT 
GTTGTGGGTG ATGGAGGTGC CAGCTGGAGA CTTAAAGCTT TGAAGCGTGC AAAGGAGCAA 
GCTGCTCGCG AAGGAAGAAA ACTTGAGGAG GTTGTTGAAG AGAGATGGAG CTCATTAGGC 
GACTTAGCTG TTTCAGTATC AGCATCAAGA GCTGCCCATT CACATGCTCA TTTGCATGCC 
ATTAGAGGCA GAAAATCTGG TAATGCTGAC AACTCAGAAG AACGTGTTAA AAGAAATCCA 
GAGGGTCAGC TGGATGGTAG CAGTGGCAGA CGTGAATATC TACGGGATGT TTCTTCTCAG 
CACCATGCCA TGAGAAAACC AAAACCTGAT TCTGTCCCAT GGAAAAAGAG AAGACAGAAT 
ATATCTTCTG AAGATCAGGC ACTTATCTCA TCAGCGGTAG CAAGCTTAAA TAAGTTTTCT 
GATGATGGAA GCTTTATGGA AAAGATTAGC AATGTTGAGA GCAAGAACAC AAATGTTTCC 
ACTGCTAGTG CTAGTGCTGA TGAGCAGAGG GACAATGGGC AGAAAACCCC TAAGGAGAGT 
TCAAACAAAG TACAATTAGT GAGCACTCAG AAACTAAATG CAAACCAGAT GGCTGCAAAG 
ATTCTGCAGC TCCGAATGAA AGGCAAGCAT CAAGAAGCTG AACAACTTTC GAGAGAAATG 
GAAGCTTTGC TGGAGAATCA GGATACTGCC CATGAGAAGC CTGGTCATGG AAAAGAAAGA 
AGCTCAATCA GGCCTACATT GAAGCCTACT GCAGCTGATC ACAGGAGAAG AGAAGATGAT 
GCGGACCTTC ATTTGGCTAA TAAAATTATG CACAACAAGC AGTATAACAT GTCCAAAAGT 
ATAGAAGATG AATATGATTT TGGTGATGCT CCCACTAAAA AGGACAAAAG AAAGAATAAA 
GAAGCACGTG ACGAGAGGAA AAGCACTGAT AGACGTATGT TGACTCAGAA GGAGCGTTGT 
ATGTATTGCT TTGAGAACCC ATCCAGGCCA AAACATCTGG TTGTTGCTAT TGGAAACTTC 
AGCTACTTGA TGCTGCCACA GTTTGAGCCT GTTGTTCCTG GGCACTGTAT TATTCTCCCA 
TTACAGCATG AATCTGGAAC GAGAACAGTT GATCAGAATG TTTGGGGGGA GATCCGCAAC 
TTCAAGAAGT GTCTGCTGAA GATGTTTGCA CAGCAGGACA AGGATGTGTT GTTTATGGAG 
ACTGTCATAA GCCTGGCCAG ACAACGGAGA CACTGCATGA TTGAGTGCAT CCCTGTCCCT 
TGTGAAGTGT CAAGCAATGC CCCAATGTAC TTCAAAAAGG CTATTGATGA AGCTGAAGAA 
GAATGGACCC AACATGAGAT GAAGAAGGTT ATCCCGACAA GTGCAAGCCG CAACTTGAGG 
CAAGTCATCC CGGAGAACTT TGCCTACTTC CATGTGGAGT TCGGGCTGGA CCGTGGCTTT 
GTTCATGTAA TAGATGACGA GAGCAAGTTC AGTGCTGGAT TTGGATTGAA TGTCATTAGA 
GGGATGCTCC AGTTGCCAGA GGAGGACATG CACCGTCGAC GAAGGCACGA GTCCATGGAT 
AACCAGAGGC AGGCTGTTGC TAGCTTCATG AAAGATTGGG AGCCCTTCGA TTGGACGAAG 
CAACTTGATT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
PLoS genetics5(11)e1000740(2009 Nov)
Soderlund C,Descour A,Kudrna D,Bomhoff M,Boyd L,Currie J,Angelova A,Collura K,Wissotski M,Ashley E,Morrow D,Fernandes J,Walbot V,Yu Y

Insights into corn genes derived from large-scale cDNA sequencing.
Plant molecular biology69(1-2)179-94(2009 Jan)
Alexandrov NN,Brover VV,Freidin S,Troukhan ME,Tatarinova TV,Zhang H,Swaller TJ,Lu YP,Bouck J,Flavell RB,Feldmann KA

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Plant physiology134(4)1317-26(2004 Apr)
Gardiner J,Schroeder S,Polacco ML,Sanchez-Villeda H,Fang Z,Morgante M,Landewe T,Fengler K,Useche F,Hanafey M,Tingey S,Chou H,Wing R,Soderlund C,Coe EH Jr

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LOC100384369 cDNA ORF clone, Zea mays

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Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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