| Gene Symbol | cl5552_1(233) |
| Entrez Gene ID | 100285345 |
| Full Name | Ribosomal L18p/L5e family protein |
| Synonyms | GRMZM2G079850 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » cl5552_1(233) cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_020553185.1 | XP_020408774.1 | uncharacterized LOC100285345 isoform X1 |
| NM_001349065.1 | NP_001335994.1 | uncharacterized protein LOC100285345 |
| XM_008681702.2 | XP_008679924.1 | uncharacterized LOC100285345 isoform X1 |
| NM_001158237.2 | NP_001151709.2 | uncharacterized protein LOC100285345 |
| XM_020553185.2 | XP_020408774.1 | uncharacterized protein LOC100285345 isoform X1 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cl5552_1(233) gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cl5552_1(233) cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa29347 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553185.1 , NM_001349065.1 , XM_008681702.2 , NM_001158237.2 , XM_020553185.2 | |
| Accession Version | NM_001349065.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 345bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1557331200000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100285345 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EU953704.1. Transcript Variant: This variant (2) has the long intron. ##Evidence-Data-START## Transcript exon combination :: EU953704.1, SRR3147039.51131.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780136, SAMN00780138 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001335994.1 |
| CDS | 72..416 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001349065.1 |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29347 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553185.1 , NM_001349065.1 , XM_008681702.2 , NM_001158237.2 , XM_020553185.2 | |
| Accession Version | NM_001158237.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 345bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1557331200000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100285345 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BT063914.1. On Mar 3, 2017 this sequence version replaced NM_001158237.1. Transcript Variant: This variant (1) has the short intron. ##Evidence-Data-START## Transcript exon combination :: BT063914.1, SRR3147033.4327.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001151709.2 |
| CDS | 347..691 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001158237.2 |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29347 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553185.1 , NM_001349065.1 , XM_008681702.2 , NM_001158237.2 , XM_020553185.2 | |
| Accession Version | XM_020553185.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 345bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized LOC100285345 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020408774.1 |
| CDS | 317..661 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020553185.1 |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29347 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553185.1 , NM_001349065.1 , XM_008681702.2 , NM_001158237.2 , XM_020553185.2 | |
| Accession Version | XM_008681702.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 345bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized LOC100285345 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008681702.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008679924.1 |
| CDS | 113..457 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008681702.2 |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29347 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020553185.1 , NM_001349065.1 , XM_008681702.2 , NM_001158237.2 , XM_020553185.2 | |
| Accession Version | XM_020553185.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 345bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100285345 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020553185.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020408774.1 |
| CDS | 339..683 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020553185.2 |
1 | ATGGTTATCC CTCCACCAGC TAGGGCTCCT GCAATCACCA AGTTCCTCAA GCCGTATATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |