| Gene Symbol | LOC100216604 |
| Entrez Gene ID | 100216604 |
| Full Name | putative RING zinc finger domain superfamily protein |
| Synonyms | GRMZM2G011473 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » LOC100216604 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_008678430.2 | XP_008676652.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| XM_008678430.3 | XP_008676652.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| XM_008678431.2 | XP_008676653.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| XM_008678429.2 | XP_008676651.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| XM_008678432.2 | XP_008676654.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| XM_008678428.2 | XP_008676650.1 | putative RING zinc finger domain superfamily protein isoform X1 |
| NM_001143017.1 | NP_001136489.1 | putative RING zinc finger domain superfamily protein |
The B73 maize genome: complexity, diversity, and dynamics.
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100216604 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100216604 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa17013 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001143017.1 | |
| Accession Version | NM_001143017.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1293bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1492704000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT037032.1. ##Evidence-Data-START## Transcript exon combination :: BT037032.1, EU967442.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGATCTAG AGAGGTCACC GCCAGCGTCG TCGGCGGAGG CGCCCGGGGA CGGCGGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001136489.1 |
| CDS | 89..1381 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001143017.1 |
1 | ATGGATCTAG AGAGGTCACC GCCAGCGTCG TCGGCGGAGG CGCCCGGGGA CGGCGGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678430.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008678430.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676652.1 |
| CDS | 239..1336 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678430.2 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678430.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008678430.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676652.1 |
| CDS | 237..1334 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678430.3 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678431.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008678431.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676653.1 |
| CDS | 298..1395 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678431.2 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678429.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008678429.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676651.1 |
| CDS | 340..1437 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678429.2 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678432.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008678432.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676654.1 |
| CDS | 414..1511 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678432.2 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa24568 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008678430.2 , XM_008678430.3 , XM_008678431.2 , XM_008678429.2 , XM_008678432.2 , XM_008678428.2 | |
| Accession Version | XM_008678428.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | putative RING zinc finger domain superfamily protein isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024462.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008678428.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008676650.1 |
| CDS | 315..1412 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008678428.2 |
1 | ATGCAATGCC CTAACTGTCG GAAGATTGAG AAAGGTCGCT GGCTTTATGC AAGCGGACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The B73 maize genome: complexity, diversity, and dynamics. |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |