Gene Symbol | LOC100194368 |
Entrez Gene ID | 100194368 |
Full Name | nonsense-mediated mRNA decay NMD3 family protein |
Synonyms | GRMZM2G169931 |
Gene Type | protein-coding |
Organism | Zea mays |
ORF » Species Summary » Zea mays » LOC100194368 cDNA ORF clone
mRNA | Protein | Name |
---|---|---|
NM_001374348.1 | NP_001361277.1 | uncharacterized protein LOC100194368 |
NM_001139403.1 | NP_001132875.1 | uncharacterized protein LOC100194368 |
NM_001139403.2 | NP_001132875.2 | uncharacterized protein LOC100194368 |
XM_008666337.2 | XP_008664559.1 | uncharacterized protein LOC100194368 isoform X1 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC100194368 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100194368 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OZa21368 | |
Clone ID Related Accession (Same CDS sequence) | NM_001139403.1 | |
Accession Version | NM_001139403.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1492531200000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100194368 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU955863.1. ##Evidence-Data-START## Transcript is intronless :: EU955863.1 [ECO:0000345] ##Evidence-Data-END## |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001132875.1 |
CDS | 197..1774 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa24517 | |
Clone ID Related Accession (Same CDS sequence) | NM_001374348.1 , NM_001139403.2 , XM_008666337.2 | |
Accession Version | NM_001374348.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1568908800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100194368 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FL390817.1 and BT036896.1. On Sep 21, 2019 this sequence version replaced XM_008666337.2. ##Evidence-Data-START## Transcript exon combination :: BT036896.1, DV025871.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780085, SAMN00780135 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001361277.1 |
CDS | 195..1772 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa24517 | |
Clone ID Related Accession (Same CDS sequence) | NM_001374348.1 , NM_001139403.2 , XM_008666337.2 | |
Accession Version | NM_001139403.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1568908800000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100194368 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EU955863.1 and DR795755.1. On Sep 21, 2019 this sequence version replaced NM_001139403.1. ##Evidence-Data-START## Transcript is intronless :: EU955863.1, SRR3147034.10293.1 [ECO:0000345] ##Evidence-Data-END## |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001132875.2 |
CDS | 197..1774 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OZa24517 | |
Clone ID Related Accession (Same CDS sequence) | NM_001374348.1 , NM_001139403.2 , XM_008666337.2 | |
Accession Version | XM_008666337.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1578bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1513440000000 | |
Organism | Zea mays | |
Product | uncharacterized protein LOC100194368 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024459.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008666337.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_008664559.1 |
CDS | 189..1766 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCTGCCAG GATCAGAGCC GGCGGCCGGC GGCACCGGTA TGTTCGTGCC GGCGGCGACG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |