LINJ_02_0390 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_02_0390
Entrez Gene ID	5066221
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001462694.1	XP_001462731.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_02_0390 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_02_0390 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00243	XM_001462694.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_02_0390 ( XM_001462694.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001462731.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc00243
Clone ID Related Accession (Same CDS sequence)	XM_001462694.1
Accession Version	XM_001462694.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3060bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009387). COMPLETENESS: incomplete on both ends.

ATGGGAGTGG TGCCGGTGAA GCGTCGGGGT GGCTTCCGCC GCGATGAGGA CCGTCGACTG 
CGACTGTCGC GCCGATGTGG GGCGACGGTG GCTGTGGTCA TGGTCTTCCT GCGTCTTTTC 
AGTCACACGA GCCCAGCCGC ACACGCCTTC AACGTCTGCG CGGACATCAG CCGCTGTAGC 
GAGTGTGTCT TCGACCAAAC CGATGGGCTC ATGCCACCGC CCCTGATGTG CGGTTGGTGC 
GAGAGCACGC AGACGTGCAA GGAGGTTAAC AGCACGGTGC TGTCTTACTA CCGAACCACC 
CCCGCTACCG GCGGCGCTGG CGGTGCAGGC GACGCAGAGG TGGAGCACAC CCCAGATGAA 
ATCGCCGCGT TCCGTGAGCA GTTCTGCGCG GATTTTCGCG AGCGCAACTT CAACGCGGTG 
TGCCCCGACA TGTTCTGCAC CGCCTCGAAG ACGACGAACA ATATCTACAT CTGCCGCGCG 
CCGTCCATCG CTGCGCTCGT GCTCGGCTGC ATCTTGTTTG TTCTCTCCAT CCTCCTGTAC 
ACGTGGATGC AGACCATTCA CCAACTGCCG TGGAAGTACG AGCCGTTCCT GTCCGACCTC 
CTCGCCGGTC GGCCCAGGCC TTCTGACCCG GCGGGCGACG ACGGCGACAC CGAGGCTATC 
GTCGACGACT GCCGCGACAC GGCCGCGGTG CCAGACATCA ATCCGCCGCC CGCAGTGCAG 
AGGGGGGATA GCGCCGCCTC GCCGTTTCGC GATCGCGACG GCGGCACCGA GGATTTCGGA 
GAGCGCGGCG GTGATGACGG TGGTGAGGGG GTATCATCAA GCCCGACCGC GCGGCGGCAG 
CAGCAGCAGC AGCCGGGGCA GCATGCCCTT CTCCATCGCG CCGCGCCGAT CGTGACGACG 
ACAGCGGCAA CCGGCTACTG CCCAATCTGC CGATGCCGCC ATCCCGTCCC CCTTGGCCCG 
GGCGACGTCT GTTTCTGGTG CAACGTCGCC CGCTTCGCCT TTGTGCCCGT CTCTCTGGCC 
CTCCTCAGCT CGTCCATCGT CATCGTCCTC AGCTTCGCCG TGTCGCTGAA GCCGTGGTTC 
GCCGATATTT ACTTTACCGA GGTGCTCGTC GCGGCGTACC TTTCCTTCGG CGGCTTCGTC 
TGGTACGTTG TGCGTTACCG CCGCCGCGCG CCGCTCTTCT GCTTCGAGAC GGAGGAGGAG 
CGCGAGGCGA AGGAGGAGGT GTGGTCCTCA ACGCGGCACC GACGGCCCAC CTCGCGGTTG 
CCGTCGGCAG CCGCCGGCCC CGCGTCCGTC ATTGGCAGCG CATCCGAGGT GGAGAGGGAG 
AGCATGCCTT CGCCACTGCA CTCGCAGAGC GTGAAGCTGC AGCTCTTGAA CGACGCGCGA 
CACAACATGG CCAGCACCAC ATATCTGAGA CTGGCACTGC GGCTGCGTGG GCGGTCGTTG 
CTCGACCAGA TCCCGGAGTT GAAGAAGTAC CGTGCGCAAA TTGCATCGAT GCACCTCGCA 
CCAGCCACCC TGACGAAGGT TGGCGGTGTT TTGGCGGCGA TGTGCACGCC CACGGCTGCC 
ACGATGGCGG GCTCTGGCGC GTACGGCGGA GATGCGGGTA CTACAGCGCC CACCACAGCC 
ACCGCCGCTG CCACCAGGGC TGTGGCTGCT GCGGGTGCCT CCATGACAGC CGTGACGAGG 
GCCGACGTGG ACGCCACCGC GGCAACGCTC ACAGCGTCTA TGCCGTCGTG CTTGTCCTTA 
CCATTTCAGC AGACGCGTCT GCCGCAGCAC CCAACGCCGC TGCCGTCGGC AGTTGCGGCC 
GCGGCCGTGG AAAGCACCGA TACGGCGAGT GTCGTGGCAG CGTCCACGCT CCCTTCCGAT 
GCCCAAACAT CCCCGGCTGC AGCTGCTGGA TCCGCTTCGG CGGCCGTTGC GACGAGCGCG 
GCGGCCGCGA CGCCGATGCC GCTGGCGATG ACGCTGCCCG ATGGAGTGGC TCGTCAGAAG 
CGGGCCGAGA CGGCCCAGCT GCTCAGCTCC GACTTTCTCT CCCCGCCGTA CCGCAAAGCC 
CTTAAGGCGA CCCTCTTCAG GGACGAGCTC ATCATGTGGT ACTCCGAGCC GCGGCTGCGC 
AGCGTGCTGA TGGAGAACAA GTGGCTGCTG CTGGACTTGC TCGCGGGCCT CCTCTTTGGC 
ATCTGGATGC TGATGCTGTC CTCGGTGAGC GACAACACCT TCGCTATTGT GCGGCTGAGC 
GGCTCGACAG CCGTGGCGGC GTGCGGCCTG GTCGTTGTGC TTGGTTTTGC GCTGCTGCTC 
GTCGTGGTCG TCCGCAGCTG CAGGCGACTC TACGTGCTCA CGGACGAGCG GCTTATCACA 
GTGTACGAGA GCATCATCGA ACCGGTGGTG ACCGCGACAG ACCTGAGTAG CGTCCGCTTC 
GCCGCCCTGT ACGGCTACCA CAGCATCTGG GCCCGCGAGC CGGTGCTCGA CTTCTCCTGG 
GAGGTCCCTG CGACAGAGCG CAAGATGCCG GCCATCAAGA GCCACAAGTT CTCGGGCATC 
ACGGATCTGC ACGAGTTTCT GTACTACTTC CGCATGGTGG CGCCGCAGAT GCCATTCCAC 
CTGCAGCAGA TTTCGGAGTC GACGCGACAG GACCGCACCG AGTGGCGCAT GCACGTCATC 
CTGTGCATCG GCTTGTTTGT TGCACTGCCC ATCATCACGG TGTACCCGCA TGCGGTGCCG 
GACTTCCTCG CCGCCTACCT CTACGTGGTG GCGCTGCTGC TCATCGGCTC GACGCTGCTG 
CGCGGACTGC GGGCACAGCA GATGACATGT GCGCCGCTGA ACATTGCCGC GTCGTGGGCT 
CCGGTCCCGG CGCGGAACGA GATGGACGGC GCAGAGCCGT TGCAGCCGCT GCCGCCGTCG 
GTGGTGACAC ATGCACCGGA CGGGTGCTCA GCGCCCAAGA CAACGCCGTC CAGCTTTGGG 
GGCCACGAAG GGGCCGCAGG AGTTCTGCAC AGCGTCAGCG TCACCGACAT CCGTGCCGAT 
ATGGAGCCCG AGCGGCAGAA AAGACCCCGC CTTTGTGTGA CTGGGCACCG CTGGCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001462731.1
CDS	1..3060
Translation	MGVVPVKRRGGFRRDEDRRLRLSRRCGATVAVVMVFLRLFSHTSPAAHAFNVCADISRCSECVFDQTDGLMPPPLMCGWCESTQTCKEVNSTVLSYYRTTPATGGAGGAGDAEVEHTPDEIAAFREQFCADFRERNFNAVCPDMFCTASKTTNNIYICRAPSIAALVLGCILFVLSILLYTWMQTIHQLPWKYEPFLSDLLAGRPRPSDPAGDDGDTEAIVDDCRDTAAVPDINPPPAVQRGDSAASPFRDRDGGTEDFGERGGDDGGEGVSSSPTARRQQQQQPGQHALLHRAAPIVTTTAATGYCPICRCRHPVPLGPGDVCFWCNVARFAFVPVSLALLSSSIVIVLSFAVSLKPWFADIYFTEVLVAAYLSFGGFVWYVVRYRRRAPLFCFETEEEREAKEEVWSSTRHRRPTSRLPSAAAGPASVIGSASEVERESMPSPLHSQSVKLQLLNDARHNMASTTYLRLALRLRGRSLLDQIPELKKYRAQIASMHLAPATLTKVGGVLAAMCTPTAATMAGSGAYGGDAGTTAPTTATAAATRAVAAAGASMTAVTRADVDATAATLTASMPSCLSLPFQQTRLPQHPTPLPSAVAAAAVESTDTASVVAASTLPSDAQTSPAAAAGSASAAVATSAAAATPMPLAMTLPDGVARQKRAETAQLLSSDFLSPPYRKALKATLFRDELIMWYSEPRLRSVLMENKWLLLDLLAGLLFGIWMLMLSSVSDNTFAIVRLSGSTAVAACGLVVVLGFALLLVVVVRSCRRLYVLTDERLITVYESIIEPVVTATDLSSVRFAALYGYHSIWAREPVLDFSWEVPATERKMPAIKSHKFSGITDLHEFLYYFRMVAPQMPFHLQQISESTRQDRTEWRMHVILCIGLFVALPIITVYPHAVPDFLAAYLYVVALLLIGSTLLRGLRAQQMTCAPLNIAASWAPVPARNEMDGAEPLQPLPPSVVTHAPDGCSAPKTTPSSFGGHEGAAGVLHSVSVTDIRADMEPERQKRPRLCVTGHRWQ

Target ORF information:

RefSeq Version	XM_001462694.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001462694.1

ORF Insert Sequence:

ATGGGAGTGG TGCCGGTGAA GCGTCGGGGT GGCTTCCGCC GCGATGAGGA CCGTCGACTG 
CGACTGTCGC GCCGATGTGG GGCGACGGTG GCTGTGGTCA TGGTCTTCCT GCGTCTTTTC 
AGTCACACGA GCCCAGCCGC ACACGCCTTC AACGTCTGCG CGGACATCAG CCGCTGTAGC 
GAGTGTGTCT TCGACCAAAC CGATGGGCTC ATGCCACCGC CCCTGATGTG CGGTTGGTGC 
GAGAGCACGC AGACGTGCAA GGAGGTTAAC AGCACGGTGC TGTCTTACTA CCGAACCACC 
CCCGCTACCG GCGGCGCTGG CGGTGCAGGC GACGCAGAGG TGGAGCACAC CCCAGATGAA 
ATCGCCGCGT TCCGTGAGCA GTTCTGCGCG GATTTTCGCG AGCGCAACTT CAACGCGGTG 
TGCCCCGACA TGTTCTGCAC CGCCTCGAAG ACGACGAACA ATATCTACAT CTGCCGCGCG 
CCGTCCATCG CTGCGCTCGT GCTCGGCTGC ATCTTGTTTG TTCTCTCCAT CCTCCTGTAC 
ACGTGGATGC AGACCATTCA CCAACTGCCG TGGAAGTACG AGCCGTTCCT GTCCGACCTC 
CTCGCCGGTC GGCCCAGGCC TTCTGACCCG GCGGGCGACG ACGGCGACAC CGAGGCTATC 
GTCGACGACT GCCGCGACAC GGCCGCGGTG CCAGACATCA ATCCGCCGCC CGCAGTGCAG 
AGGGGGGATA GCGCCGCCTC GCCGTTTCGC GATCGCGACG GCGGCACCGA GGATTTCGGA 
GAGCGCGGCG GTGATGACGG TGGTGAGGGG GTATCATCAA GCCCGACCGC GCGGCGGCAG 
CAGCAGCAGC AGCCGGGGCA GCATGCCCTT CTCCATCGCG CCGCGCCGAT CGTGACGACG 
ACAGCGGCAA CCGGCTACTG CCCAATCTGC CGATGCCGCC ATCCCGTCCC CCTTGGCCCG 
GGCGACGTCT GTTTCTGGTG CAACGTCGCC CGCTTCGCCT TTGTGCCCGT CTCTCTGGCC 
CTCCTCAGCT CGTCCATCGT CATCGTCCTC AGCTTCGCCG TGTCGCTGAA GCCGTGGTTC 
GCCGATATTT ACTTTACCGA GGTGCTCGTC GCGGCGTACC TTTCCTTCGG CGGCTTCGTC 
TGGTACGTTG TGCGTTACCG CCGCCGCGCG CCGCTCTTCT GCTTCGAGAC GGAGGAGGAG 
CGCGAGGCGA AGGAGGAGGT GTGGTCCTCA ACGCGGCACC GACGGCCCAC CTCGCGGTTG 
CCGTCGGCAG CCGCCGGCCC CGCGTCCGTC ATTGGCAGCG CATCCGAGGT GGAGAGGGAG 
AGCATGCCTT CGCCACTGCA CTCGCAGAGC GTGAAGCTGC AGCTCTTGAA CGACGCGCGA 
CACAACATGG CCAGCACCAC ATATCTGAGA CTGGCACTGC GGCTGCGTGG GCGGTCGTTG 
CTCGACCAGA TCCCGGAGTT GAAGAAGTAC CGTGCGCAAA TTGCATCGAT GCACCTCGCA 
CCAGCCACCC TGACGAAGGT TGGCGGTGTT TTGGCGGCGA TGTGCACGCC CACGGCTGCC 
ACGATGGCGG GCTCTGGCGC GTACGGCGGA GATGCGGGTA CTACAGCGCC CACCACAGCC 
ACCGCCGCTG CCACCAGGGC TGTGGCTGCT GCGGGTGCCT CCATGACAGC CGTGACGAGG 
GCCGACGTGG ACGCCACCGC GGCAACGCTC ACAGCGTCTA TGCCGTCGTG CTTGTCCTTA 
CCATTTCAGC AGACGCGTCT GCCGCAGCAC CCAACGCCGC TGCCGTCGGC AGTTGCGGCC 
GCGGCCGTGG AAAGCACCGA TACGGCGAGT GTCGTGGCAG CGTCCACGCT CCCTTCCGAT 
GCCCAAACAT CCCCGGCTGC AGCTGCTGGA TCCGCTTCGG CGGCCGTTGC GACGAGCGCG 
GCGGCCGCGA CGCCGATGCC GCTGGCGATG ACGCTGCCCG ATGGAGTGGC TCGTCAGAAG 
CGGGCCGAGA CGGCCCAGCT GCTCAGCTCC GACTTTCTCT CCCCGCCGTA CCGCAAAGCC 
CTTAAGGCGA CCCTCTTCAG GGACGAGCTC ATCATGTGGT ACTCCGAGCC GCGGCTGCGC 
AGCGTGCTGA TGGAGAACAA GTGGCTGCTG CTGGACTTGC TCGCGGGCCT CCTCTTTGGC 
ATCTGGATGC TGATGCTGTC CTCGGTGAGC GACAACACCT TCGCTATTGT GCGGCTGAGC 
GGCTCGACAG CCGTGGCGGC GTGCGGCCTG GTCGTTGTGC TTGGTTTTGC GCTGCTGCTC 
GTCGTGGTCG TCCGCAGCTG CAGGCGACTC TACGTGCTCA CGGACGAGCG GCTTATCACA 
GTGTACGAGA GCATCATCGA ACCGGTGGTG ACCGCGACAG ACCTGAGTAG CGTCCGCTTC 
GCCGCCCTGT ACGGCTACCA CAGCATCTGG GCCCGCGAGC CGGTGCTCGA CTTCTCCTGG 
GAGGTCCCTG CGACAGAGCG CAAGATGCCG GCCATCAAGA GCCACAAGTT CTCGGGCATC 
ACGGATCTGC ACGAGTTTCT GTACTACTTC CGCATGGTGG CGCCGCAGAT GCCATTCCAC 
CTGCAGCAGA TTTCGGAGTC GACGCGACAG GACCGCACCG AGTGGCGCAT GCACGTCATC 
CTGTGCATCG GCTTGTTTGT TGCACTGCCC ATCATCACGG TGTACCCGCA TGCGGTGCCG 
GACTTCCTCG CCGCCTACCT CTACGTGGTG GCGCTGCTGC TCATCGGCTC GACGCTGCTG 
CGCGGACTGC GGGCACAGCA GATGACATGT GCGCCGCTGA ACATTGCCGC GTCGTGGGCT 
CCGGTCCCGG CGCGGAACGA GATGGACGGC GCAGAGCCGT TGCAGCCGCT GCCGCCGTCG 
GTGGTGACAC ATGCACCGGA CGGGTGCTCA GCGCCCAAGA CAACGCCGTC CAGCTTTGGG 
GGCCACGAAG GGGCCGCAGG AGTTCTGCAC AGCGTCAGCG TCACCGACAT CCGTGCCGAT 
ATGGAGCCCG AGCGGCAGAA AAGACCCCGC CTTTGTGTGA CTGGGCACCG CTGGCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_02_0390 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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