LINJ_23_1970 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_23_1970
Entrez Gene ID	10966429
Full Name	neutral sphingomyelinase activation associated factor-like protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392472.1	XP_003392520.1	neutral sphingomyelinase activation associated factor-like protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_23_1970 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_23_1970 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07694	XM_003392472.1 Latest version!	Leishmania infantum JPCM5 neutral sphingomyelinase activation associated factor-like protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_23_1970 ( XM_003392472.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392520.1 Leishmania infantum JPCM5 neutral sphingomyelinase activation associated factor-like protein partial mRNA.

Price & Availability↑

CloneID	OLc07694
Clone ID Related Accession (Same CDS sequence)	XM_003392472.1
Accession Version	XM_003392472.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2778bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	neutral sphingomyelinase activation associated factor-like protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009407). COMPLETENESS: incomplete on both ends.

ATGCGTCGCC GGCGCTCTCG TTTGACGCTC TACTGGCTCA CAGACAAGGA GTGGTTTCTC 
GGCGAAGACG ACTGTGTGCG GCCCGCCTCT AGGTGGAGAT CGCTTCTGGG CACTGTCACG 
GAAGGCGCAC TGTCCTTGGC GTCGGAACAT CTGTTTTTTG ATGACGGCGG CCCGCACGTC 
GTTATTTTCC CACTGTCAAG AGTGGCGGAT GCCGCCGTGC ACCTTTGCAA TGAGCACATT 
TCCGTAACGT TCACGTGCAA GAACGCACTG CGGCGCGAAG TGCTCACGCC GCCAACCAGC 
AAGCACTCGG TTCCAGGCAT CTGCAGGCCA TACCCGAACA AGGAGACGTG GGTGTTTCAC 
TTTCCACGCG CGTCTGAGTG GGTCGCGGAG TCCCTCCGCA GCCTCTTTAC CCGGCATCGC 
ATCGAGGACA TCCTGTCACG CCGCGAGGTT GCTTTGCAGG GTGCCTCCTC CGTTGTCAGC 
TTCTGTGCGC GGCGTCAGGT GCCGATGCGG GAGCAGAGAG GCGTTCTCTA CATCGGCGAT 
GCCGAGCTTG TCTTCGAGCC GCTCTTCCCT CTGTCGGCGC ACGGGGTAGT AACGCTGGAC 
CGTCGCCAGT GCCGTCACAC CTTTGCTCGG TGGATCATCT TTGAGGCTGT GGGGCTCGAC 
CTGTACACGT CCGAGTCACC TGCAGCGACT CCTGCGCTGT CGCTTATCTT CCGCAACTCT 
CGCGAAAGGG ATGAGGCTGC CCACCTGCTT GCCGAGCGCC TCGGCGTTCC ACCCTACCGT 
GTCTCCATCC AGACCGTTTC GCAAGCGTGG AGGAACCACT CCATCTCCAG CTACGAGTAC 
CTCCTGCACC TAAACAAGTG GGCGTCGCGG TGCGCCAACG ACGTCTTTCA GTACCCCGTC 
TTTCCTTGGG TACTCGCCGA CTACACCTCG TCTGCGCTGG ACCTTTCTCA GCCGTCGACC 
TTCCGCGACC TGTCCAAGCC GATAGGTGCC CTCTCCCCGT CGCGGCTGGC CCTCCTCCGG 
GAGCGGGCTG AGTTCCTGCG AGAGGCAGAG GAGACGGCAT ACTTGTACTC CACGCACTAC 
TCCTCCGCTG CTATCGTCGC CTACTACTTG GTGCGTCCTC ACCCTGAGTT TCAGCTGAGT 
CTTCAGGGCG GTACGCTCGA TGTGCCGGAG CGCATCATGG AGTCCATTCC ACAGCTTTGG 
AACAGCGTCA CGACAAACTC GAGCAACTTC CGCGAGCTCA TTCCACAGTT CTTCAACGAA 
GGCTTCGTGG CACTGTGCGG TCCTCCTCTC CTTCCTCTCG GTTTGCATGC CGACGGGTCT 
CCCGTGGCCG CGTATGTTAA GCTGCCTCCG TGGGCGGCTA GCAGTGAGGA CTTTGTACGC 
CAACATCGTG CAGCCCTTGA GAGCGATATC GTTTCCGCGT CTCTCCACCT ATGGATCGAC 
CTCGTCTTCG GCGTGGCGCA GACTGGCGAG CAAGCGTGTG CGTCGGATAA CTTATTTCAC 
CCCTTTTCGT ACCCCCAGTG TGACAGGCAG CTGAGCGTGC CTGGGCTGCA CCTCTCATCC 
CGCGAGTATG CGAGAGAGTT CGGGAACGTG CCGATTCAAC TCTTCGCCGA CCTGCATCCG 
CCACGCGCGA GGATTGCGCA CACACTTGCG TGCACGGCAG AAGCCTTAGA AGCGTGCGGG 
TGCGCGACCA CGTCTGCCAA TCAGCAACGC CTCTTGCGCA TGATGGAGGA GCTGCAGTTC 
ATTGAGGACG CGACGGACAC CGTGGCCGAC TCGGCGGACG CACACGACGA AGGCGCGCAT 
GGTCTGCCCA CGCACGCAGC AGCTCTCACC GTCATTTCGA CCACCTCCCT ATCTTGCCGC 
TCAGCTCGTT TTGTTACACT TGGCCACAGC CATGCCGATC CACCCGCCTC ACCGACGGCA 
GTGCTGCTTG TCGTTGGCAG TGATCAGCGC ACGGCGACGC TATTCGACGT CGCGACGGGC 
AAGCGCATTC GCTCCTTTCC CGATTTTGAT GGCCTCATCA CCGCCACCGC TTTTCACGAC 
AGCCACATGT TCGTTTTCAC AGAGACTACA AGTTGTTACG TTCTGTCGCT CACCTCGCAC 
GCCGTGGCAC ACTTTACCGC TGAGGTGACG CCTGCAGCTG TCCTCCAAGC TTGTTTCGCA 
TCACAGCTGG TCGTTCTTGC AGACTCCAAC GCACAACTCT CGGGCTGGGC ACTGCAGCGC 
GGCACATCCC CGTTACTCTT TGAGTCGCCG CTCTCCTTTA CGTGCGAGGC CTCCTCGCGG 
GTCGCGTGCA TCGGCTCCTC CGCGGATGGC GACACCGTTG TCGCCGCCAC CGAGCAGTTG 
GAGGTCTTTG TTTGTCGCGG AGGCACATGT TGCGAGTGCA TGCTTCAACA GGTGCCTGCT 
CCATCAGCGG TCCTGCACAT CATGCCGGCA GATCGGCTCA CACGCTTCTG GGTGTTCTTT 
CTCGAGGAGG CCGCTCTCTA TGATCTTGGA GGCCTTCCGC TGAGGCGTAT TGCCACCACT 
GCCGCGTCTA TCATGACGTG CCCTCAGCTG GCCTACCAGC TCTACCCGCT CTACATACAC 
ATGGACAACG GAGCCCTTGA GGTGTTCCAG CTGCTGCACA GTGGGGAGCG CGCCGTGCCG 
CTGCGGTGCA GCCGGCTGCG GTCTCTGCAG CTCTCGTCCG CCGGCAACCT CGTCGCTTTC 
GTCGGCACCG CCGTTGCCGA TTGCGAGCCG TCGCTCGTCC TTACGATGGC CGCACTGACG 
GCTCAGCTGA CAGGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392520.1
CDS	1..2778
Translation	MRRRRSRLTLYWLTDKEWFLGEDDCVRPASRWRSLLGTVTEGALSLASEHLFFDDGGPHVVIFPLSRVADAAVHLCNEHISVTFTCKNALRREVLTPPTSKHSVPGICRPYPNKETWVFHFPRASEWVAESLRSLFTRHRIEDILSRREVALQGASSVVSFCARRQVPMREQRGVLYIGDAELVFEPLFPLSAHGVVTLDRRQCRHTFARWIIFEAVGLDLYTSESPAATPALSLIFRNSRERDEAAHLLAERLGVPPYRVSIQTVSQAWRNHSISSYEYLLHLNKWASRCANDVFQYPVFPWVLADYTSSALDLSQPSTFRDLSKPIGALSPSRLALLRERAEFLREAEETAYLYSTHYSSAAIVAYYLVRPHPEFQLSLQGGTLDVPERIMESIPQLWNSVTTNSSNFRELIPQFFNEGFVALCGPPLLPLGLHADGSPVAAYVKLPPWAASSEDFVRQHRAALESDIVSASLHLWIDLVFGVAQTGEQACASDNLFHPFSYPQCDRQLSVPGLHLSSREYAREFGNVPIQLFADLHPPRARIAHTLACTAEALEACGCATTSANQQRLLRMMEELQFIEDATDTVADSADAHDEGAHGLPTHAAALTVISTTSLSCRSARFVTLGHSHADPPASPTAVLLVVGSDQRTATLFDVATGKRIRSFPDFDGLITATAFHDSHMFVFTETTSCYVLSLTSHAVAHFTAEVTPAAVLQACFASQLVVLADSNAQLSGWALQRGTSPLLFESPLSFTCEASSRVACIGSSADGDTVVAATEQLEVFVCRGGTCCECMLQQVPAPSAVLHIMPADRLTRFWVFFLEEAALYDLGGLPLRRIATTAASIMTCPQLAYQLYPLYIHMDNGALEVFQLLHSGERAVPLRCSRLRSLQLSSAGNLVAFVGTAVADCEPSLVLTMAALTAQLTG

Target ORF information:

RefSeq Version	XM_003392472.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 neutral sphingomyelinase activation associated factor-like protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392472.1

ORF Insert Sequence:

ATGCGTCGCC GGCGCTCTCG TTTGACGCTC TACTGGCTCA CAGACAAGGA GTGGTTTCTC 
GGCGAAGACG ACTGTGTGCG GCCCGCCTCT AGGTGGAGAT CGCTTCTGGG CACTGTCACG 
GAAGGCGCAC TGTCCTTGGC GTCGGAACAT CTGTTTTTTG ATGACGGCGG CCCGCACGTC 
GTTATTTTCC CACTGTCAAG AGTGGCGGAT GCCGCCGTGC ACCTTTGCAA TGAGCACATT 
TCCGTAACGT TCACGTGCAA GAACGCACTG CGGCGCGAAG TGCTCACGCC GCCAACCAGC 
AAGCACTCGG TTCCAGGCAT CTGCAGGCCA TACCCGAACA AGGAGACGTG GGTGTTTCAC 
TTTCCACGCG CGTCTGAGTG GGTCGCGGAG TCCCTCCGCA GCCTCTTTAC CCGGCATCGC 
ATCGAGGACA TCCTGTCACG CCGCGAGGTT GCTTTGCAGG GTGCCTCCTC CGTTGTCAGC 
TTCTGTGCGC GGCGTCAGGT GCCGATGCGG GAGCAGAGAG GCGTTCTCTA CATCGGCGAT 
GCCGAGCTTG TCTTCGAGCC GCTCTTCCCT CTGTCGGCGC ACGGGGTAGT AACGCTGGAC 
CGTCGCCAGT GCCGTCACAC CTTTGCTCGG TGGATCATCT TTGAGGCTGT GGGGCTCGAC 
CTGTACACGT CCGAGTCACC TGCAGCGACT CCTGCGCTGT CGCTTATCTT CCGCAACTCT 
CGCGAAAGGG ATGAGGCTGC CCACCTGCTT GCCGAGCGCC TCGGCGTTCC ACCCTACCGT 
GTCTCCATCC AGACCGTTTC GCAAGCGTGG AGGAACCACT CCATCTCCAG CTACGAGTAC 
CTCCTGCACC TAAACAAGTG GGCGTCGCGG TGCGCCAACG ACGTCTTTCA GTACCCCGTC 
TTTCCTTGGG TACTCGCCGA CTACACCTCG TCTGCGCTGG ACCTTTCTCA GCCGTCGACC 
TTCCGCGACC TGTCCAAGCC GATAGGTGCC CTCTCCCCGT CGCGGCTGGC CCTCCTCCGG 
GAGCGGGCTG AGTTCCTGCG AGAGGCAGAG GAGACGGCAT ACTTGTACTC CACGCACTAC 
TCCTCCGCTG CTATCGTCGC CTACTACTTG GTGCGTCCTC ACCCTGAGTT TCAGCTGAGT 
CTTCAGGGCG GTACGCTCGA TGTGCCGGAG CGCATCATGG AGTCCATTCC ACAGCTTTGG 
AACAGCGTCA CGACAAACTC GAGCAACTTC CGCGAGCTCA TTCCACAGTT CTTCAACGAA 
GGCTTCGTGG CACTGTGCGG TCCTCCTCTC CTTCCTCTCG GTTTGCATGC CGACGGGTCT 
CCCGTGGCCG CGTATGTTAA GCTGCCTCCG TGGGCGGCTA GCAGTGAGGA CTTTGTACGC 
CAACATCGTG CAGCCCTTGA GAGCGATATC GTTTCCGCGT CTCTCCACCT ATGGATCGAC 
CTCGTCTTCG GCGTGGCGCA GACTGGCGAG CAAGCGTGTG CGTCGGATAA CTTATTTCAC 
CCCTTTTCGT ACCCCCAGTG TGACAGGCAG CTGAGCGTGC CTGGGCTGCA CCTCTCATCC 
CGCGAGTATG CGAGAGAGTT CGGGAACGTG CCGATTCAAC TCTTCGCCGA CCTGCATCCG 
CCACGCGCGA GGATTGCGCA CACACTTGCG TGCACGGCAG AAGCCTTAGA AGCGTGCGGG 
TGCGCGACCA CGTCTGCCAA TCAGCAACGC CTCTTGCGCA TGATGGAGGA GCTGCAGTTC 
ATTGAGGACG CGACGGACAC CGTGGCCGAC TCGGCGGACG CACACGACGA AGGCGCGCAT 
GGTCTGCCCA CGCACGCAGC AGCTCTCACC GTCATTTCGA CCACCTCCCT ATCTTGCCGC 
TCAGCTCGTT TTGTTACACT TGGCCACAGC CATGCCGATC CACCCGCCTC ACCGACGGCA 
GTGCTGCTTG TCGTTGGCAG TGATCAGCGC ACGGCGACGC TATTCGACGT CGCGACGGGC 
AAGCGCATTC GCTCCTTTCC CGATTTTGAT GGCCTCATCA CCGCCACCGC TTTTCACGAC 
AGCCACATGT TCGTTTTCAC AGAGACTACA AGTTGTTACG TTCTGTCGCT CACCTCGCAC 
GCCGTGGCAC ACTTTACCGC TGAGGTGACG CCTGCAGCTG TCCTCCAAGC TTGTTTCGCA 
TCACAGCTGG TCGTTCTTGC AGACTCCAAC GCACAACTCT CGGGCTGGGC ACTGCAGCGC 
GGCACATCCC CGTTACTCTT TGAGTCGCCG CTCTCCTTTA CGTGCGAGGC CTCCTCGCGG 
GTCGCGTGCA TCGGCTCCTC CGCGGATGGC GACACCGTTG TCGCCGCCAC CGAGCAGTTG 
GAGGTCTTTG TTTGTCGCGG AGGCACATGT TGCGAGTGCA TGCTTCAACA GGTGCCTGCT 
CCATCAGCGG TCCTGCACAT CATGCCGGCA GATCGGCTCA CACGCTTCTG GGTGTTCTTT 
CTCGAGGAGG CCGCTCTCTA TGATCTTGGA GGCCTTCCGC TGAGGCGTAT TGCCACCACT 
GCCGCGTCTA TCATGACGTG CCCTCAGCTG GCCTACCAGC TCTACCCGCT CTACATACAC 
ATGGACAACG GAGCCCTTGA GGTGTTCCAG CTGCTGCACA GTGGGGAGCG CGCCGTGCCG 
CTGCGGTGCA GCCGGCTGCG GTCTCTGCAG CTCTCGTCCG CCGGCAACCT CGTCGCTTTC 
GTCGGCACCG CCGTTGCCGA TTGCGAGCCG TCGCTCGTCC TTACGATGGC CGCACTGACG 
GCTCAGCTGA CAGGGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_23_1970 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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