LINJ_06_1010 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_06_1010
Entrez Gene ID	10966035
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392173.1	XP_003392221.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_06_1010 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_06_1010 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07411	XM_003392173.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_06_1010 ( XM_003392173.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392221.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07411
Clone ID Related Accession (Same CDS sequence)	XM_003392173.1
Accession Version	XM_003392173.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3090bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009277). COMPLETENESS: incomplete on both ends.

ATGGGGTGCA AGAATTCGTC ACACACGATG TCGGGAAGCA GTTCCGTGGC AGGCACCGCT 
CCTGGCGCCA TCGAGGACGC TGGGAGCTCC TCGCCAGTCT TCGGCTCCGG CGTTCATGTC 
GGTCGCTCCG GTAACGTGGA CCTCTCGGGG CGCGACCTAG ATGTGCTGGG GCCGCAGATG 
GTGCACATGA TCAATGAAGA CGAGCTACAT CGCACTGCAA CATCGCTAAG ACTATCAAAC 
AACAGGCTGT ATGCGCTGGC CAAGGAACTG CCACTGCTGT CGAACCTGCG TGAGCTCGAT 
ATCGACCACA ACCGGTTCCA GCGCTTCCCC GAGGTACTTG TACGGCTGCC GCGTCTGTGG 
CGCATCAACG CCAGCTTCAA CCCCATCGGT AGCGTACGCG GATTCGACGT GTTGCCGCGT 
CTCCTCTCGC TGCGCTCGCT GACGGTGCGG GATTGCAGCC TGAAGGAGAT CCCTATGGCG 
GTGATCCAGT GCGAAGTTCT GGAGGAACTC GACGTGGGCA ACAACCCGGA GATCAAGATC 
ACCGGCGTTG CCTTGCATCG GCTCAAGCGA CTGAAGAAGC TTGGTGTGGC GAACTGCAAC 
CTCGGTGGGC GCACCCTTCC CAACGCGATC AAGCGCATGA GACTGACATC GCTCGACATC 
TCCGGCAACG CCTTCACCTT CACCGACCCG AACTTCTTCG GAAGGAGTAT GCCACACTCG 
CTGATAGAGC TGCACCTCGT CGGCATGAAT CTCACGGCAC CGCCGGCGGT GGTGGCACTG 
CTGAAGAAGC TTAACTTCCT CGACCTCGCT GAGAACCCCA TTGAGACGCT CGACGTCCTC 
GCCGGCCGCG TGGTGAAGCG GCTGCATCAC GTGGCTAGCA ACGGCACGGT GGCCACCGCC 
GGCACAAACG GCTTCTCCGA TGCGCCAGCG GAAGAGGAGG ACGACTTCGA GGAAGACGAG 
ACGTCCACCC ACGCCTCCGG CGGCGTCGCC AGCGCCGTGA CGAGCCGCGT CAGCCTCAGC 
AAGGCGAGCA GGGAGGGGAT CGTATCGCAC GTGACGCAGC CGATCCCGCT GAAGCGGCTC 
TCGCTGCGCG CGTGCAACTT TCGCATGGTG CCCAAATACT TCCACAAGCT GGGCCAACTC 
GAAGAGCTCG ACCTCTCCGA GAACGAAAAC CTCGACGACC CGAACATGAC ACTATTCTCG 
CTGCAGAGTT TGGTGACGCT GAACATTGTC GGCTGCCCCT TCGCCGAGGA CCCGTCGCAG 
TCGCGGAACG AGTGGTTCGA CATTGGCAAG CTCCCCAACC TGCGCAATAT TCAGTGGGAA 
GTGTGGAAGA GCGAGCACAA CATGAGCCCC TATCGCACCA AGATCCCGAT CGAGCTGTGC 
GCGCTGCGAC TGCGCACGCT GAACGAAGTG CAGCTACGCC GCAACCTCTT CACCGGCGAC 
ATTATAGAGA CAGTTATCAA TCTCTTGTCC GACGGCTACT TCAAGGTGGA TCTGTCCGTG 
GACGAGATGA TCCTGCACAC CCACGTCGCC GCCGTCAAGG CCTTCACCGA GGGCGAGCGC 
TTCTTCTTCC CCAAGACGAT CACCGAAGTG CCGAACCTTA AGTGCGGCGT CGACCCAGCC 
TCGCTTGGGC AGGTGCACCT CAAGATCGCT CTCAGCCGCT ACATCTTCTT CCTAGCCATA 
CAGGCGGCCA ACTACGACGC CGTCATCATC CCGCCACTGG ATGTCATGAT CATCCACTAC 
GCGCAGCTCA CTGTCCACCC GCTCAAGTAC CGCACCGACT GCGAGGCCGT GTGTGGGCGC 
ATACTGGACT GCAACTATCG AACCTTCTTC GCGGAGCAGA AGAAGCACCA GGCGGAGGCG 
AAGAGCGTCG TGGATGCGTC GAGACGCATC TGGAATTTGA TGGTGCGCTC CGCCCAGCGC 
GATCTCGCGT GGCTGCGGTA CGACTTCTGG GACAAGCGAC TGCGCGCGTC GGCGGCCGAT 
GGCGCCGCCG GAGCTGCGTT CTCCGGTGAG CATACGGCGA TCCCGAAGAC GTTGCCGCTG 
CTGGTCGGCA AGACGACTGC CGAGGTGACG CAGGACTGGC AGTCTATGAT GTCCATCGAC 
TCGGCGCACG ACTTGGCCGG TGTGCTGGAC CAGGCCATCA CGTCGCACTT CTCTGAGAAG 
GGCGTAGAGG ATTTCGGTGC GTCCATTCAG CAGTTTTATG AGATAAACCG CTGCTTCCTG 
TGCCACGAGG ATTCTCTGTG GAAGGCAGAC CTCGACTGGA ACCGGTATGT GAAGTTTCTG 
ACCCTCTACG CCTACCGGTG CGCCGTGCTC GAGGGCGATA CAGCCTACGT CGTGGAGCCG 
GTCGCGGACG AGGAAGGCAA CCTTGTCGCG CCAGATCGCA CCACCTCGAT GCTGGGTAAG 
CACTACGACT CCATGAACAA CCGCAGCTTC GACGACGCGG GCAAGTACCT GCCGAAGCCA 
CAAGATGGGG GGCAGAAAGG CCCCCCCAAC ATCGTGTCAG AGAACCAGGC CGAGTCTAGC 
GGTGTCCCGC AAACCCGCAC CGCCAGCGGC TTCGCTCGTC GGTCCTTGTC TACGCTGCAG 
AAGGCCAGCA AGTCGAACAA GCGGCTGACG ATGGTGCGCC AGCTCGAGGG CAACCCCGTG 
CCCACGATCG GTATCATCTT TATGCTCCAC GCCCACCGCA CCTCACACCT GAAGTACTAT 
CAGTCCATGT CGTTGTTTGC CATCGAAAAC GTTGATGTGG TGTGGGGCGC CGCGGGTTAC 
GGCATCTTGA AGCAGATGCA GGGCGCATGG ATGGCCTTGT ATGACGAGGC GTACGTCAGC 
GAAAACAAGG AGATGCTGTT CAGCTACCTC GTGCAGAACG GCGTGCTGAT GCCGACCTCC 
GACCCGTGCG ATGCCGCGAA CACAGTGGCA GGGGACGGCT CTGCGACGGC GAAGAAGTCG 
GGCGGCACAT CGAAGCAGAA GCATCGGTAC GCCTACGTGT CGGACGTGGC GCCGCACAGG 
TCGTGCATCA AGGCGCGCCC ACGCAACGCG GACAACTTCG GCCGCCGGGT GACATTCTGC 
AGCGCTGACA CGGAGTTTGG CGTCTTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392221.1
CDS	1..3090
Translation	MGCKNSSHTMSGSSSVAGTAPGAIEDAGSSSPVFGSGVHVGRSGNVDLSGRDLDVLGPQMVHMINEDELHRTATSLRLSNNRLYALAKELPLLSNLRELDIDHNRFQRFPEVLVRLPRLWRINASFNPIGSVRGFDVLPRLLSLRSLTVRDCSLKEIPMAVIQCEVLEELDVGNNPEIKITGVALHRLKRLKKLGVANCNLGGRTLPNAIKRMRLTSLDISGNAFTFTDPNFFGRSMPHSLIELHLVGMNLTAPPAVVALLKKLNFLDLAENPIETLDVLAGRVVKRLHHVASNGTVATAGTNGFSDAPAEEEDDFEEDETSTHASGGVASAVTSRVSLSKASREGIVSHVTQPIPLKRLSLRACNFRMVPKYFHKLGQLEELDLSENENLDDPNMTLFSLQSLVTLNIVGCPFAEDPSQSRNEWFDIGKLPNLRNIQWEVWKSEHNMSPYRTKIPIELCALRLRTLNEVQLRRNLFTGDIIETVINLLSDGYFKVDLSVDEMILHTHVAAVKAFTEGERFFFPKTITEVPNLKCGVDPASLGQVHLKIALSRYIFFLAIQAANYDAVIIPPLDVMIIHYAQLTVHPLKYRTDCEAVCGRILDCNYRTFFAEQKKHQAEAKSVVDASRRIWNLMVRSAQRDLAWLRYDFWDKRLRASAADGAAGAAFSGEHTAIPKTLPLLVGKTTAEVTQDWQSMMSIDSAHDLAGVLDQAITSHFSEKGVEDFGASIQQFYEINRCFLCHEDSLWKADLDWNRYVKFLTLYAYRCAVLEGDTAYVVEPVADEEGNLVAPDRTTSMLGKHYDSMNNRSFDDAGKYLPKPQDGGQKGPPNIVSENQAESSGVPQTRTASGFARRSLSTLQKASKSNKRLTMVRQLEGNPVPTIGIIFMLHAHRTSHLKYYQSMSLFAIENVDVVWGAAGYGILKQMQGAWMALYDEAYVSENKEMLFSYLVQNGVLMPTSDPCDAANTVAGDGSATAKKSGGTSKQKHRYAYVSDVAPHRSCIKARPRNADNFGRRVTFCSADTEFGVF

Target ORF information:

RefSeq Version	XM_003392173.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392173.1

ORF Insert Sequence:

ATGGGGTGCA AGAATTCGTC ACACACGATG TCGGGAAGCA GTTCCGTGGC AGGCACCGCT 
CCTGGCGCCA TCGAGGACGC TGGGAGCTCC TCGCCAGTCT TCGGCTCCGG CGTTCATGTC 
GGTCGCTCCG GTAACGTGGA CCTCTCGGGG CGCGACCTAG ATGTGCTGGG GCCGCAGATG 
GTGCACATGA TCAATGAAGA CGAGCTACAT CGCACTGCAA CATCGCTAAG ACTATCAAAC 
AACAGGCTGT ATGCGCTGGC CAAGGAACTG CCACTGCTGT CGAACCTGCG TGAGCTCGAT 
ATCGACCACA ACCGGTTCCA GCGCTTCCCC GAGGTACTTG TACGGCTGCC GCGTCTGTGG 
CGCATCAACG CCAGCTTCAA CCCCATCGGT AGCGTACGCG GATTCGACGT GTTGCCGCGT 
CTCCTCTCGC TGCGCTCGCT GACGGTGCGG GATTGCAGCC TGAAGGAGAT CCCTATGGCG 
GTGATCCAGT GCGAAGTTCT GGAGGAACTC GACGTGGGCA ACAACCCGGA GATCAAGATC 
ACCGGCGTTG CCTTGCATCG GCTCAAGCGA CTGAAGAAGC TTGGTGTGGC GAACTGCAAC 
CTCGGTGGGC GCACCCTTCC CAACGCGATC AAGCGCATGA GACTGACATC GCTCGACATC 
TCCGGCAACG CCTTCACCTT CACCGACCCG AACTTCTTCG GAAGGAGTAT GCCACACTCG 
CTGATAGAGC TGCACCTCGT CGGCATGAAT CTCACGGCAC CGCCGGCGGT GGTGGCACTG 
CTGAAGAAGC TTAACTTCCT CGACCTCGCT GAGAACCCCA TTGAGACGCT CGACGTCCTC 
GCCGGCCGCG TGGTGAAGCG GCTGCATCAC GTGGCTAGCA ACGGCACGGT GGCCACCGCC 
GGCACAAACG GCTTCTCCGA TGCGCCAGCG GAAGAGGAGG ACGACTTCGA GGAAGACGAG 
ACGTCCACCC ACGCCTCCGG CGGCGTCGCC AGCGCCGTGA CGAGCCGCGT CAGCCTCAGC 
AAGGCGAGCA GGGAGGGGAT CGTATCGCAC GTGACGCAGC CGATCCCGCT GAAGCGGCTC 
TCGCTGCGCG CGTGCAACTT TCGCATGGTG CCCAAATACT TCCACAAGCT GGGCCAACTC 
GAAGAGCTCG ACCTCTCCGA GAACGAAAAC CTCGACGACC CGAACATGAC ACTATTCTCG 
CTGCAGAGTT TGGTGACGCT GAACATTGTC GGCTGCCCCT TCGCCGAGGA CCCGTCGCAG 
TCGCGGAACG AGTGGTTCGA CATTGGCAAG CTCCCCAACC TGCGCAATAT TCAGTGGGAA 
GTGTGGAAGA GCGAGCACAA CATGAGCCCC TATCGCACCA AGATCCCGAT CGAGCTGTGC 
GCGCTGCGAC TGCGCACGCT GAACGAAGTG CAGCTACGCC GCAACCTCTT CACCGGCGAC 
ATTATAGAGA CAGTTATCAA TCTCTTGTCC GACGGCTACT TCAAGGTGGA TCTGTCCGTG 
GACGAGATGA TCCTGCACAC CCACGTCGCC GCCGTCAAGG CCTTCACCGA GGGCGAGCGC 
TTCTTCTTCC CCAAGACGAT CACCGAAGTG CCGAACCTTA AGTGCGGCGT CGACCCAGCC 
TCGCTTGGGC AGGTGCACCT CAAGATCGCT CTCAGCCGCT ACATCTTCTT CCTAGCCATA 
CAGGCGGCCA ACTACGACGC CGTCATCATC CCGCCACTGG ATGTCATGAT CATCCACTAC 
GCGCAGCTCA CTGTCCACCC GCTCAAGTAC CGCACCGACT GCGAGGCCGT GTGTGGGCGC 
ATACTGGACT GCAACTATCG AACCTTCTTC GCGGAGCAGA AGAAGCACCA GGCGGAGGCG 
AAGAGCGTCG TGGATGCGTC GAGACGCATC TGGAATTTGA TGGTGCGCTC CGCCCAGCGC 
GATCTCGCGT GGCTGCGGTA CGACTTCTGG GACAAGCGAC TGCGCGCGTC GGCGGCCGAT 
GGCGCCGCCG GAGCTGCGTT CTCCGGTGAG CATACGGCGA TCCCGAAGAC GTTGCCGCTG 
CTGGTCGGCA AGACGACTGC CGAGGTGACG CAGGACTGGC AGTCTATGAT GTCCATCGAC 
TCGGCGCACG ACTTGGCCGG TGTGCTGGAC CAGGCCATCA CGTCGCACTT CTCTGAGAAG 
GGCGTAGAGG ATTTCGGTGC GTCCATTCAG CAGTTTTATG AGATAAACCG CTGCTTCCTG 
TGCCACGAGG ATTCTCTGTG GAAGGCAGAC CTCGACTGGA ACCGGTATGT GAAGTTTCTG 
ACCCTCTACG CCTACCGGTG CGCCGTGCTC GAGGGCGATA CAGCCTACGT CGTGGAGCCG 
GTCGCGGACG AGGAAGGCAA CCTTGTCGCG CCAGATCGCA CCACCTCGAT GCTGGGTAAG 
CACTACGACT CCATGAACAA CCGCAGCTTC GACGACGCGG GCAAGTACCT GCCGAAGCCA 
CAAGATGGGG GGCAGAAAGG CCCCCCCAAC ATCGTGTCAG AGAACCAGGC CGAGTCTAGC 
GGTGTCCCGC AAACCCGCAC CGCCAGCGGC TTCGCTCGTC GGTCCTTGTC TACGCTGCAG 
AAGGCCAGCA AGTCGAACAA GCGGCTGACG ATGGTGCGCC AGCTCGAGGG CAACCCCGTG 
CCCACGATCG GTATCATCTT TATGCTCCAC GCCCACCGCA CCTCACACCT GAAGTACTAT 
CAGTCCATGT CGTTGTTTGC CATCGAAAAC GTTGATGTGG TGTGGGGCGC CGCGGGTTAC 
GGCATCTTGA AGCAGATGCA GGGCGCATGG ATGGCCTTGT ATGACGAGGC GTACGTCAGC 
GAAAACAAGG AGATGCTGTT CAGCTACCTC GTGCAGAACG GCGTGCTGAT GCCGACCTCC 
GACCCGTGCG ATGCCGCGAA CACAGTGGCA GGGGACGGCT CTGCGACGGC GAAGAAGTCG 
GGCGGCACAT CGAAGCAGAA GCATCGGTAC GCCTACGTGT CGGACGTGGC GCCGCACAGG 
TCGTGCATCA AGGCGCGCCC ACGCAACGCG GACAACTTCG GCCGCCGGGT GACATTCTGC 
AGCGCTGACA CGGAGTTTGG CGTCTTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_06_1010 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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