ORF » Species Summary » Zea mays » LOC100285536 cDNA ORF clone

LOC100285536 cDNA ORF clone, Zea mays

The following LOC100285536 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100285536 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OZa04793 NM_001158427.2
Latest version!		 Zea mays uncharacterized LOC100285536 (LOC100285536), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OZa29399 XM_008653337.1
Latest version!		 Zea mays SHL1 (PHD3), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC100285536 ( NM_001158427.2 ) cDNA ORF clone, Zea mays -> NP_001151899.1 Zea mays uncharacterized LOC100285536 (LOC100285536), mRNA.
    Price & Availability↑
    CloneID OZa04793
    Clone ID Related Accession (Same CDS sequence) NM_001158427.2
    Accession Version NM_001158427.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 660bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1557331200000
    Organism Zea mays
    Product uncharacterized protein LOC100285536
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU972735.1. On May 30, 2015 this sequence version replaced NM_001158427.1. ##Evidence-Data-START## Transcript exon combination :: EU972735.1, SRR3147022.2201.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGCGGGGA AGTCGCGACC GCCCAAGCGG ATCCTCGAGT CCTATACCAT CAAGGGTTCG 
    GACAGAGTCA TCAAGCCTGG CGATTGCGTG CTAATGAGGG CATCTGATGC TTCAAAGCCA 
    CCTTATGTGG CAAGAGTTGA GGCAATTGAA GCAGCAGGAT CTCGAGGCAC CAATGTGAGA 
    GTACGAGTGC GGTGGTATTA TCGACCAGAG GAGTCCATAG GTGGTCGGCG GCCATTTCAT 
    GGTTCCAAGG AGGTTTTCCT CTCTGACCAC TATGATGTAC AAAGTGCTGA CACCATTGAG 
    GGGAAATGCA ATGTCCACAG CTTCCGTAGC TATACAAAGC TTGATTCTGT CAATGCTGAG 
    GATTTCTTCT GCCGCTTCGA GTATAAATCA GCTACTGGCA GCTTTGTACC AGATCGTATA 
    GCAGTGTTTT GCAAGTGCGA GATGCCATAC AATCCAGATG ACCTTATGAT CCAATGCGAG 
    GAATGTTCTG ACTGGTTTCA CCCTGCTTGC ATTGGGATGA CAATCAAAGA AGCAAAGAAA 
    CTCGAGCATT TTTTCTGCCA GACCTGTACA GCTGAAAATG GTAAGATGGT TGAGAATTCA 
    CATGAAGCTA CAGCGCAATC AGAAGAAAAG CCGGTGGAGT CAAAAAGGCG GCGAAGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001151899.1
    CDS157..816
    Translation

    Target ORF information:

    RefSeq Version NM_001158427.2
    Organism Zea mays
    Definition Zea mays uncharacterized LOC100285536 (LOC100285536), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001158427.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGCGGGGA AGTCGCGACC GCCCAAGCGG ATCCTCGAGT CCTATACCAT CAAGGGTTCG 
    GACAGAGTCA TCAAGCCTGG CGATTGCGTG CTAATGAGGG CATCTGATGC TTCAAAGCCA 
    CCTTATGTGG CAAGAGTTGA GGCAATTGAA GCAGCAGGAT CTCGAGGCAC CAATGTGAGA 
    GTACGAGTGC GGTGGTATTA TCGACCAGAG GAGTCCATAG GTGGTCGGCG GCCATTTCAT 
    GGTTCCAAGG AGGTTTTCCT CTCTGACCAC TATGATGTAC AAAGTGCTGA CACCATTGAG 
    GGGAAATGCA ATGTCCACAG CTTCCGTAGC TATACAAAGC TTGATTCTGT CAATGCTGAG 
    GATTTCTTCT GCCGCTTCGA GTATAAATCA GCTACTGGCA GCTTTGTACC AGATCGTATA 
    GCAGTGTTTT GCAAGTGCGA GATGCCATAC AATCCAGATG ACCTTATGAT CCAATGCGAG 
    GAATGTTCTG ACTGGTTTCA CCCTGCTTGC ATTGGGATGA CAATCAAAGA AGCAAAGAAA 
    CTCGAGCATT TTTTCTGCCA GACCTGTACA GCTGAAAATG GTAAGATGGT TGAGAATTCA 
    CATGAAGCTA CAGCGCAATC AGAAGAAAAG CCGGTGGAGT CAAAAAGGCG GCGAAGGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100285536 ( XM_008653337.1 ) cDNA ORF clone, Zea mays -> XP_008651559.1 Zea mays SHL1 (PHD3), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OZa29399
    Clone ID Related Accession (Same CDS sequence) XM_008653337.1
    Accession Version XM_008653337.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 645bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1489852800000
    Organism Zea mays
    Product SHL1 isoform X1
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGCGGGGA AGTCGCGACC GCCCAAGCGG ATCCTCGAGT CCTATACCAT CAAGGGTTCG 
    GACAGAGTCA TCAAGCCTGG CGATTGCGTG CTAATGAGGG CATCTGATGC TTCAAAGCCA 
    CCTTATGTGG CAAGAGTTGA GGCAATTGAA GCAGCAGGAT CTCGAGGCAC CAATGTGAGA 
    GTACGAGTGC GGTGGTATTA TCGACCAGAG GAGTCCATAG GTGGTCGGCG GCCATTTCAT 
    GGTTCCAAGG AGGTTTTCCT CTCTGACCAC TATGATGTAC AAAGTGCTGA CACCATTGAG 
    GGGAAATGCA ATGTCCACAG CTTCCGTAGC TATACAAAGC TTGATTCTGT CAATGCTGAG 
    GATTTCTTCT GCCGCTTCGA GTATAAATCA GCTACTGGCA GCTTTGTACC AGATCGTATA 
    GCAGTGTTTT GCAAGTGCGA GATGCCATAC AATCCAGATG ACCTTATGAT CCAATGCGAG 
    GAATGTTCTG ACTGGTTTCA CCCTGCTTGC ATTGGGATGA CAATCAAAGA AGCAAAGAAA 
    CTCGAGCATT TTTTCTGCCA GACCTGTACA GCTGAAAATG GTAAGATGGT TGAGAATTCA 
    CATGAAGCTA CAGCGCAATC AGAAGAAAAG TATAACTTTA ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_008651559.1
    CDS182..826
    Translation

    Target ORF information:

    RefSeq Version XM_008653337.1
    Organism Zea mays
    Definition Zea mays SHL1 (PHD3), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_008653337.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGGCGGGGA AGTCGCGACC GCCCAAGCGG ATCCTCGAGT CCTATACCAT CAAGGGTTCG 
    GACAGAGTCA TCAAGCCTGG CGATTGCGTG CTAATGAGGG CATCTGATGC TTCAAAGCCA 
    CCTTATGTGG CAAGAGTTGA GGCAATTGAA GCAGCAGGAT CTCGAGGCAC CAATGTGAGA 
    GTACGAGTGC GGTGGTATTA TCGACCAGAG GAGTCCATAG GTGGTCGGCG GCCATTTCAT 
    GGTTCCAAGG AGGTTTTCCT CTCTGACCAC TATGATGTAC AAAGTGCTGA CACCATTGAG 
    GGGAAATGCA ATGTCCACAG CTTCCGTAGC TATACAAAGC TTGATTCTGT CAATGCTGAG 
    GATTTCTTCT GCCGCTTCGA GTATAAATCA GCTACTGGCA GCTTTGTACC AGATCGTATA 
    GCAGTGTTTT GCAAGTGCGA GATGCCATAC AATCCAGATG ACCTTATGAT CCAATGCGAG 
    GAATGTTCTG ACTGGTTTCA CCCTGCTTGC ATTGGGATGA CAATCAAAGA AGCAAAGAAA 
    CTCGAGCATT TTTTCTGCCA GACCTGTACA GCTGAAAATG GTAAGATGGT TGAGAATTCA 
    CATGAAGCTA CAGCGCAATC AGAAGAAAAG TATAACTTTA ACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The B73 maize genome: complexity, diversity, and dynamics.
    Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
    Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK


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