ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_5855 cDNA ORF clone

THAPSDRAFT_5855 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_5855 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_5855 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf02025 XM_002291250.1
Latest version!		 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_5855 ( XM_002291250.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002291286.1 Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OTf02025
    Clone ID Related Accession (Same CDS sequence) XM_002291250.1
    Accession Version XM_002291250.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3405bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012069). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGTTGATCA AGCTTCTGAG GGATGAGAAT GCAATCTTTC GCCCTCATGA CACCCACGCC 
    TTTTTGCAGG GGATGGACAT GTTTGATTCG AAGCCGGAGC TTCTCCTTTT GCTCACCGAT 
    AGCCGCAACT GTGGCGAAGA GAGATTGCGA GAGTGCCTCT CGATGATTGC CGGTCCTGAG 
    TCAGCCGATT CTATAATTGC TCCTATTTTG TCCAATATCA TGACTGACGA AACATCACGC 
    CCTCTCCACA AGGCTCGTCG TAAGATGGCC TTAATAATGA TTTACAATGT ACCCGGGTTG 
    GTCCAGTTTT TGGCTGAAGA TTGGGCACAG TGCATGAGTG CATCCTTAAA TGAAACTGTG 
    TTCGTTATCT GTCAATTTCT CATCGAGGCA TCTCTTTCTC TCGTTGAAGC TCGGTGCTCA 
    GAAGACGTTA GAACAATCGC CAAGAGTATG AAGAAGTCAA CTCAGATTGA CACAAAACTA 
    TCCCATAAGC TATGTGCTAT TCTTCAGATA GTAGACACAC CTGGTTTGAG GATAGCACAA 
    AAGACAAAGA CAAGAGATGA AACTGCTGTT TGTTGGGGAA CAGACCTGGA GTTCCCCGGT 
    GGTCGACATG ATAATGATCA TCCGAACTTT AGAGATATCT CTCTTGTTCC AACAAAGACT 
    GAGCTCGCAT ACACAGGGCG CTCGTGGCTG CCACTGGCGA GCGGGGAAAA CAGGTGTGTC 
    CAAGATCTTG GTCAATGTTT GCTGGATAAG AACTTTCGCC TTCTTCGTGA AGACACAGTT 
    GGGGCAATGA GGAAAAAAAT TACTGATCCA AGACCATCAA AGGTCTGGAA GAATGCGAGG 
    ATTATTGGGG CTTCGTGTGA ACACAGCCTC AATCCAAAGG GAACTGCGCC TCTTCATTTC 
    TTAGTCCAAG TTGATCCTTA TCAAGGCAAA CCAATGAATT GGCAGAGACA AAGAACGTTC 
    CCTTTTGGTG GACTGGTTGC TTTTTATGAT GGTCAGCAAC ATATCATGGC TACGATACAT 
    GTAAGGATTC CTGATAAACC GGGCGAATGG TTGCTTCACA CAGGCGGACC AATCATTGGC 
    GTCGTCTTTC ATCAAGATGA TGATGTTAGG AATGCCATCA GAGACATTTC TGCGAATAAG 
    GATGTCAATG AGAGATTTCA TGAGATCCTG AATGACGCTG TGGAGAAACG AGACACAGTG 
    AAGTTTGCTC AATTGAAGTC TAGCTTCAAG ACTTACAGTC TGATTGAAGT TTCAGACTCG 
    TTCTGCTCTT ACCGGCCTGT GCTGGAGTCT CTTCAGACCA TGGTATCTGT ACCCTTGTCT 
    CGAGAACTTG TGCACCTAGA GCGTCATCGT GATAGGCCAC TTTATTTACC ACGGATTGTG 
    AAGCTTCCCT CTGATTTTAA TGGTGTTGAA GTTGATCTCG ATGCGTGGTC CAATGAAACC 
    GTGATACAAT CAACTACATT GGACGAATCT CAGTCAACAG CACTTGGAAT GGCGCTGACT 
    TCAAGAGTTG CGCTAATACA AGGACCCCCA GGCACCGGCA AGACATTCAT CGGGAGCCTC 
    ATTGCGCAGA TCATTCGAGA TAACTCTGAT GAGTCGATAC TCTGTGTATG CTACACAAAC 
    CACGCCCTCG ATCAATTTCT GGAGCACATG TTGAAACGAG GGGAGAAAAG GCTTGTGCGC 
    ATTGGTGGTC GAACCAGATC AGAGGCTCTC GAGAAATTTG GACTGAACGC TTTATCAAAG 
    AAGGAGAGAT CTCTCGCTTT AAGTGAATCT GACAAGCGAA TGAGGTCGGT TGTTGCACAG 
    ATGTACAAGT GCAAGGACGA AATCTCCTTG CTATTGCAAA CGCTTCATAT GCCTCTTGAA 
    TGGGAGCATG CACGGGATGT CCTGGAAGCA ACCAATTCTA ACCTTCTGAT GAACTTCCAA 
    GTAAGTCAGC ATGATGGTTT TGCTGTGGTA GGACGAAACA ATTCAAACAT CGATGAAGAT 
    TATTTGTTCA GCGCATGGAA ACGAGGCGAA GATTGCCCTG AGTGGTTGCA AGAGAGCCTA 
    TCATGGGAGA TCGAAGAGAC CGAAAATCTT TGGCTGCTTC TCCCAGCACA ACGGTTGGAA 
    CTCATGAATG AATGGAAGGA ATTGCAGTTT GGAGAAATAT ATGGAATGAT ACTCGATGCA 
    AGACAGAGGT ATGAAGTATT GTCAGCCGAA AAAGTTGACA TCGGCCAAGC AATTGACTCA 
    TACATTCTTC AAAAGGCACG CATCATCGGT GCGACTACAA CTGGTGCTGC AAAGTATCGG 
    GATCTCTTGT CACTTAAAAG CGCATCCGTC GTCATTGTTG AAGAAGCAGG GGAGGTGCTT 
    GAGCCTCATG TATTGACGTC GTTGACTGAA AACAAGGATA ACTCAGAGGA AACAAAGCAC 
    TTGATCCTTA TTGGAGATCA TCTGCAGCTT AGACCAAAGC TTGAAAGCTA CAGCCTCACC 
    AAGGTATCAG GAAATGGATT TGATTTCGAT ATCTCGCTAT TCGAGCGACT TATTCATTCA 
    GGGTTTCATT CAGCCATGCT TGGAGTTCAG CATCGTATGC GACCATGTAT TGCTGATATT 
    ATTAGACGCC AAACGTATCC ATCCCTTAAG GACCATCCCT CGGTATCCTC CTTTCCGGAT 
    GTACGGGGCG TCCCAGATAA CTTGCTGTTC ATTGACCATG CAAACTTCGA AAGCGGAGCT 
    GATGATCTGG CAACAACAAA GTCCAATCAT TTCGAGGCTC AATTTTGCGT TGAAATAGTT 
    CGGTACTTAC TTTTGCAAGG TTATGCACAC AGTCAAGTGA CGATACTATC TCCATATGTC 
    GGACAAATAT TGGCGATTGT GAAGGAGATG AGAAGAAGTA TGAACGATGT GAACACATTT 
    GTTTCTGAGC TGGATCAAGC AGAGCTTTTG AGAGAAGACG CCGACCTCGA AGGAATTGAT 
    TCTCAGGCAG AGAAAACTAA AAAGAAGCAA ATTCGATGTT CCAGTGTCGA TAATTATCAA 
    GGAGAGGAAT GTGATATTAT CGTAATAAGC CTTGTCCGGT GCAACAAGCA TAATGGTATT 
    GGGTTCCTGA AGGAAGAACA GCGCGTAAAT GTGCTTCTCT CGAGAGCCAA GCATGGGATG 
    TTTATCGTTG GCAATGCTGC AACTTTTCGT TCATCAAAAG GGAACCATGT CTGGAAGCCC 
    TTGCTTGACA TGTTTCAATC TCAAGGACGC ATTGTCAAGT CATTTCCGAC CATCTGCCAG 
    TTGCACCCCA CGGATGAAAC TACTTATTGC AGAACAGTCC AAGAGTTCCG TACGCAGCGG 
    CCTAATGGAG GATGTAACAG ACCTTGTAGT GCTCGTCTTC AGTGCGGTCA TGCATGTCCC 
    CTTACGATTC CCTCCTCATT GCTCAAGAAA TCATCCGTGC AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002291286.1
    CDS1..3405
    Translation

    Target ORF information:

    RefSeq Version XM_002291250.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002291250.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGTTGATCA AGCTTCTGAG GGATGAGAAT GCAATCTTTC GCCCTCATGA CACCCACGCC 
    TTTTTGCAGG GGATGGACAT GTTTGATTCG AAGCCGGAGC TTCTCCTTTT GCTCACCGAT 
    AGCCGCAACT GTGGCGAAGA GAGATTGCGA GAGTGCCTCT CGATGATTGC CGGTCCTGAG 
    TCAGCCGATT CTATAATTGC TCCTATTTTG TCCAATATCA TGACTGACGA AACATCACGC 
    CCTCTCCACA AGGCTCGTCG TAAGATGGCC TTAATAATGA TTTACAATGT ACCCGGGTTG 
    GTCCAGTTTT TGGCTGAAGA TTGGGCACAG TGCATGAGTG CATCCTTAAA TGAAACTGTG 
    TTCGTTATCT GTCAATTTCT CATCGAGGCA TCTCTTTCTC TCGTTGAAGC TCGGTGCTCA 
    GAAGACGTTA GAACAATCGC CAAGAGTATG AAGAAGTCAA CTCAGATTGA CACAAAACTA 
    TCCCATAAGC TATGTGCTAT TCTTCAGATA GTAGACACAC CTGGTTTGAG GATAGCACAA 
    AAGACAAAGA CAAGAGATGA AACTGCTGTT TGTTGGGGAA CAGACCTGGA GTTCCCCGGT 
    GGTCGACATG ATAATGATCA TCCGAACTTT AGAGATATCT CTCTTGTTCC AACAAAGACT 
    GAGCTCGCAT ACACAGGGCG CTCGTGGCTG CCACTGGCGA GCGGGGAAAA CAGGTGTGTC 
    CAAGATCTTG GTCAATGTTT GCTGGATAAG AACTTTCGCC TTCTTCGTGA AGACACAGTT 
    GGGGCAATGA GGAAAAAAAT TACTGATCCA AGACCATCAA AGGTCTGGAA GAATGCGAGG 
    ATTATTGGGG CTTCGTGTGA ACACAGCCTC AATCCAAAGG GAACTGCGCC TCTTCATTTC 
    TTAGTCCAAG TTGATCCTTA TCAAGGCAAA CCAATGAATT GGCAGAGACA AAGAACGTTC 
    CCTTTTGGTG GACTGGTTGC TTTTTATGAT GGTCAGCAAC ATATCATGGC TACGATACAT 
    GTAAGGATTC CTGATAAACC GGGCGAATGG TTGCTTCACA CAGGCGGACC AATCATTGGC 
    GTCGTCTTTC ATCAAGATGA TGATGTTAGG AATGCCATCA GAGACATTTC TGCGAATAAG 
    GATGTCAATG AGAGATTTCA TGAGATCCTG AATGACGCTG TGGAGAAACG AGACACAGTG 
    AAGTTTGCTC AATTGAAGTC TAGCTTCAAG ACTTACAGTC TGATTGAAGT TTCAGACTCG 
    TTCTGCTCTT ACCGGCCTGT GCTGGAGTCT CTTCAGACCA TGGTATCTGT ACCCTTGTCT 
    CGAGAACTTG TGCACCTAGA GCGTCATCGT GATAGGCCAC TTTATTTACC ACGGATTGTG 
    AAGCTTCCCT CTGATTTTAA TGGTGTTGAA GTTGATCTCG ATGCGTGGTC CAATGAAACC 
    GTGATACAAT CAACTACATT GGACGAATCT CAGTCAACAG CACTTGGAAT GGCGCTGACT 
    TCAAGAGTTG CGCTAATACA AGGACCCCCA GGCACCGGCA AGACATTCAT CGGGAGCCTC 
    ATTGCGCAGA TCATTCGAGA TAACTCTGAT GAGTCGATAC TCTGTGTATG CTACACAAAC 
    CACGCCCTCG ATCAATTTCT GGAGCACATG TTGAAACGAG GGGAGAAAAG GCTTGTGCGC 
    ATTGGTGGTC GAACCAGATC AGAGGCTCTC GAGAAATTTG GACTGAACGC TTTATCAAAG 
    AAGGAGAGAT CTCTCGCTTT AAGTGAATCT GACAAGCGAA TGAGGTCGGT TGTTGCACAG 
    ATGTACAAGT GCAAGGACGA AATCTCCTTG CTATTGCAAA CGCTTCATAT GCCTCTTGAA 
    TGGGAGCATG CACGGGATGT CCTGGAAGCA ACCAATTCTA ACCTTCTGAT GAACTTCCAA 
    GTAAGTCAGC ATGATGGTTT TGCTGTGGTA GGACGAAACA ATTCAAACAT CGATGAAGAT 
    TATTTGTTCA GCGCATGGAA ACGAGGCGAA GATTGCCCTG AGTGGTTGCA AGAGAGCCTA 
    TCATGGGAGA TCGAAGAGAC CGAAAATCTT TGGCTGCTTC TCCCAGCACA ACGGTTGGAA 
    CTCATGAATG AATGGAAGGA ATTGCAGTTT GGAGAAATAT ATGGAATGAT ACTCGATGCA 
    AGACAGAGGT ATGAAGTATT GTCAGCCGAA AAAGTTGACA TCGGCCAAGC AATTGACTCA 
    TACATTCTTC AAAAGGCACG CATCATCGGT GCGACTACAA CTGGTGCTGC AAAGTATCGG 
    GATCTCTTGT CACTTAAAAG CGCATCCGTC GTCATTGTTG AAGAAGCAGG GGAGGTGCTT 
    GAGCCTCATG TATTGACGTC GTTGACTGAA AACAAGGATA ACTCAGAGGA AACAAAGCAC 
    TTGATCCTTA TTGGAGATCA TCTGCAGCTT AGACCAAAGC TTGAAAGCTA CAGCCTCACC 
    AAGGTATCAG GAAATGGATT TGATTTCGAT ATCTCGCTAT TCGAGCGACT TATTCATTCA 
    GGGTTTCATT CAGCCATGCT TGGAGTTCAG CATCGTATGC GACCATGTAT TGCTGATATT 
    ATTAGACGCC AAACGTATCC ATCCCTTAAG GACCATCCCT CGGTATCCTC CTTTCCGGAT 
    GTACGGGGCG TCCCAGATAA CTTGCTGTTC ATTGACCATG CAAACTTCGA AAGCGGAGCT 
    GATGATCTGG CAACAACAAA GTCCAATCAT TTCGAGGCTC AATTTTGCGT TGAAATAGTT 
    CGGTACTTAC TTTTGCAAGG TTATGCACAC AGTCAAGTGA CGATACTATC TCCATATGTC 
    GGACAAATAT TGGCGATTGT GAAGGAGATG AGAAGAAGTA TGAACGATGT GAACACATTT 
    GTTTCTGAGC TGGATCAAGC AGAGCTTTTG AGAGAAGACG CCGACCTCGA AGGAATTGAT 
    TCTCAGGCAG AGAAAACTAA AAAGAAGCAA ATTCGATGTT CCAGTGTCGA TAATTATCAA 
    GGAGAGGAAT GTGATATTAT CGTAATAAGC CTTGTCCGGT GCAACAAGCA TAATGGTATT 
    GGGTTCCTGA AGGAAGAACA GCGCGTAAAT GTGCTTCTCT CGAGAGCCAA GCATGGGATG 
    TTTATCGTTG GCAATGCTGC AACTTTTCGT TCATCAAAAG GGAACCATGT CTGGAAGCCC 
    TTGCTTGACA TGTTTCAATC TCAAGGACGC ATTGTCAAGT CATTTCCGAC CATCTGCCAG 
    TTGCACCCCA CGGATGAAAC TACTTATTGC AGAACAGTCC AAGAGTTCCG TACGCAGCGG 
    CCTAATGGAG GATGTAACAG ACCTTGTAGT GCTCGTCTTC AGTGCGGTCA TGCATGTCCC 
    CTTACGATTC CCTCCTCATT GCTCAAGAAA TCATCCGTGC AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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