ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_39864 cDNA ORF clone

THAPSDRAFT_39864 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_39864 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_39864 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf05901 XM_002288269.1
Latest version!		 Thalassiosira pseudonana CCMP1335 atp-dependent RNA helicase mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_39864 ( XM_002288269.1 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002288305.1 Thalassiosira pseudonana CCMP1335 atp-dependent RNA helicase mRNA.
    Price & Availability↑
    CloneID OTf05901
    Clone ID Related Accession (Same CDS sequence) XM_002288269.1
    Accession Version XM_002288269.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1137bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product atp-dependent RNA helicase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012066). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGGATTTG AACGCCCCTC GGCCATTCAA GAGGAGGCTC TTCCTCGTAT ATTGGCAAGC 
    CCTCCCCGTA ATGTTATCGG CCAGGCTCAA TCGGGTTCTG GAAAGACTGC CGCCTTCGTT 
    TTGGGAATGC TGTATCGTAT TCAGATTGAT ACGCCCGCGA CGTGTCAGGC GTTGTGTGTT 
    ACACCCACGA GGGAGTTGGC GGTGCAGATT TTTCAGAATG CCGTGACTCC CATGGCGGCT 
    CATATGACTG GGTTGAAGGT TCGTTTGGCA TTGTCGGGGG AGAATATTGA GAGGGGATCC 
    AAGTTGGATG CTCATATGGT GATTGGTACT CCTGGAAAGG TGGTGGATTG GCTCAAGAGG 
    AGGATTATTG ATGTCAAGAG GATTAAGGTG TTTGTGTTGG ATGAGGCTGA TAATATGGTG 
    TCGGAGAGTG GGCATAGGGC GAACTCGTTG CTTATTAAGA AACAAATGCC CAAGGGATGT 
    CAGAGTTTGT TGTTCTCGGC TACTTTTCCA CCGGAGGTTA TTGGGTTTGC GGAGAAGATG 
    GTGTACAATC CTGATAAGAT TTTGATTGAG AGTGGTCCGG AGTTCTTGGT CCTTGATGTG 
    ATCAAACAAC TCTGGATTGA CTGTCAAAAC TACGATGGTG GAAAGCTTCA GTTTTTGGAA 
    GATATCTATT CCCTACTCGT GATTGGACAA TCCATTATCT TCGTTGGAAC AAAGAGAGAC 
    GCTGATTCCG TCCATCGTAC GTTGACAGAC TCGGGGTATA CTTGCTCGTT GCTCCACAGT 
    AGTGTCGACA ACGATGAACG TGATAGAACG ATGGAAGCAT TCCGTAAGAA CGAGTCCAAT 
    GTACTCATTA CAACCAATGT CTTGGCACGT GGTGTGGATG TCGACAATGT ATGTCTCGTG 
    GTGAATTACG ATGTGCCCGT GGATAAGGAT GGACAGCCAG ACTTTGAAAC GTACTTGCAT 
    CGTATTGGAA GGACTGGTCG TTTCGGGAGG AAGGGAACTG CAATAAACCT TATTGGAGAT 
    CAGAGATCTA TTGAAGTGCT GGCGTCAATT GAAGCTCACT TTTCATCAGA TGGCAAGGAG 
    ATGATATCCA ATGCTCCTGC CGATCCCGAG GCATTGGCGG ATATCATTCA GATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002288305.1
    CDS103..1239
    Translation

    Target ORF information:

    RefSeq Version XM_002288269.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 atp-dependent RNA helicase mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002288269.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGGATTTG AACGCCCCTC GGCCATTCAA GAGGAGGCTC TTCCTCGTAT ATTGGCAAGC 
    CCTCCCCGTA ATGTTATCGG CCAGGCTCAA TCGGGTTCTG GAAAGACTGC CGCCTTCGTT 
    TTGGGAATGC TGTATCGTAT TCAGATTGAT ACGCCCGCGA CGTGTCAGGC GTTGTGTGTT 
    ACACCCACGA GGGAGTTGGC GGTGCAGATT TTTCAGAATG CCGTGACTCC CATGGCGGCT 
    CATATGACTG GGTTGAAGGT TCGTTTGGCA TTGTCGGGGG AGAATATTGA GAGGGGATCC 
    AAGTTGGATG CTCATATGGT GATTGGTACT CCTGGAAAGG TGGTGGATTG GCTCAAGAGG 
    AGGATTATTG ATGTCAAGAG GATTAAGGTG TTTGTGTTGG ATGAGGCTGA TAATATGGTG 
    TCGGAGAGTG GGCATAGGGC GAACTCGTTG CTTATTAAGA AACAAATGCC CAAGGGATGT 
    CAGAGTTTGT TGTTCTCGGC TACTTTTCCA CCGGAGGTTA TTGGGTTTGC GGAGAAGATG 
    GTGTACAATC CTGATAAGAT TTTGATTGAG AGTGGTCCGG AGTTCTTGGT CCTTGATGTG 
    ATCAAACAAC TCTGGATTGA CTGTCAAAAC TACGATGGTG GAAAGCTTCA GTTTTTGGAA 
    GATATCTATT CCCTACTCGT GATTGGACAA TCCATTATCT TCGTTGGAAC AAAGAGAGAC 
    GCTGATTCCG TCCATCGTAC GTTGACAGAC TCGGGGTATA CTTGCTCGTT GCTCCACAGT 
    AGTGTCGACA ACGATGAACG TGATAGAACG ATGGAAGCAT TCCGTAAGAA CGAGTCCAAT 
    GTACTCATTA CAACCAATGT CTTGGCACGT GGTGTGGATG TCGACAATGT ATGTCTCGTG 
    GTGAATTACG ATGTGCCCGT GGATAAGGAT GGACAGCCAG ACTTTGAAAC GTACTTGCAT 
    CGTATTGGAA GGACTGGTCG TTTCGGGAGG AAGGGAACTG CAATAAACCT TATTGGAGAT 
    CAGAGATCTA TTGAAGTGCT GGCGTCAATT GAAGCTCACT TTTCATCAGA TGGCAAGGAG 
    ATGATATCCA ATGCTCCTGC CGATCCCGAG GCATTGGCGG ATATCATTCA GATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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