ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_262069 cDNA ORF clone

THAPSDRAFT_262069 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_262069 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_262069 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09168 XM_002289616.2
Latest version!		 Thalassiosira pseudonana CCMP1335 Na+/H+ exchanger partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_262069 ( XM_002289616.2 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002289652.1 Thalassiosira pseudonana CCMP1335 Na+/H+ exchanger partial mRNA.
    Price & Availability↑
    CloneID OTf09168
    Clone ID Related Accession (Same CDS sequence) XM_002289616.2
    Accession Version XM_002289616.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2127bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product Na+/H+ exchanger
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012067). On Jun 16, 2017 this sequence version replaced XM_002289616.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGGAAACAC AACACGTACA TCAACGACGT CGTCGTCGAA GTATCATCTC CAGATGTTCC 
    TCCATCACCA CCTTCCTCAT AACGTGTTGC AGCAGCTGTT GCGATGCATT CCAAACACCA 
    AACCCAACAA ATAGGCTGTC CACAAGATGT ATAACTCCCA TAACATCGTC GTCGTCATCC 
    CTTCAAGCAG CACCCATTCC ATTTCCGGAC ATTCACATCC CTTTCGATGA ACTGAGCCGA 
    CAACTCACCG ACACACTCGA CATTGGAGCC GAGTTCCTCA AAGACTCATC CACATCTCAA 
    AACCAAATAC CAGAAGCTCA AACATCACAA GTATTAGATT CCGTAGGACA GGACTTGCTC 
    ATATTTCTCT TCTCGTCGGT GGTGGTAACG CTTGGATCGA CTGCGTTAAA CATTAGTCCG 
    ATACTTGGGT ATTTGGTGGC GGGGGCGTTA CTTGGCCCTC ATGGATTGGA TGTGTTTTCG 
    AATGCCAAGG CCGATGTCGA GTTGGGAGAC TTTGGTATTC TCTTCTTGCT GTTCTCGGAA 
    GGATTGGAGG TATCATCGGC ACGGTTGAAA AAGCTATCCA ACTATTTGCC ATTGGGGTTT 
    GCACAGATTT CGTTGACTAC GGGAGTCATC ACTGCAGCTA TATTGTTGGG TGCACCGCAG 
    TTCTTGGATA GATTCCTTCC GTTGGATGAA GGGTTCATCG ACATTCGTAA TCCTACAGAA 
    GCAGTGGTGT TGGCACTTGC TGGAACGTTG AGTACGTCAG CTTTTATCTT TCCAGTCTTG 
    AAAGAAAGAG GATGGGAAGG GGAGAATAGT GGGCAGGCTG CCACTTCGAT ATTGTTGCTG 
    CAAGACTTAT TTGTGGCTCC ATTGTTGGTG GTACTTCCCT ATGTCGTTGG GCAAGGTCCA 
    ACAGACTTTG TAGCGATTGG ATTCTTGACC GCAAAAGCTG CAATTGGATT TGGTCTCGTA 
    ATGTATGTCG GCTCATTCCT TCTACAAAGA TTATTTGGAG TGGTGGCACA AACTAGATCA 
    ACAGAAACGT TCGTTGCATT ATCGTTGTTG GTTAGCGTAG GAATGGGAGC GGTAGCACAA 
    TCTTTAGGGT TGACTGATAC AGCAGGAGCG TTCGCGGCAG GTGTTTTGCT TGCCAACACA 
    AACTTTAGAG CACAAATACA AGCAGATGTG TTGCCATTCA AAGGTATTCT TTTGGGAATT 
    TTTTTCATGG ACGCCGGAAG TCTGTTTGAT TCAGACTTGG TACTTGCAGA GTTGCCGACG 
    GTCTTGACGG GTGCAATCGC TCTTATTGTT CTGAAAGCTG TAACTGTCGG TCTGGCAACT 
    CGTGTTCCTC GATGGTTGGA ACCAAATCGT TTAGAGCCTT ACGACGCAGT AAAGCTGTCC 
    TTCCTTCTAT CTGGAGGAGG AGAGTTTGCT TTTGTGGTGT TGGCGCTGGC AGAGAGATTA 
    GAGGTACTCC CGAAAGACTT GGGAGGATTG CTCACAGCTG TTGTGCTAAT CACAATGGCT 
    GTTACTCCGT TGCTTGGCGA GGTAGCCGAG ATTGCATCAA AAGCTTTTGT GTCATATACA 
    GTAAACCAAG GAACGCAAAT ACCAGCAGAA GAGTATGAAG TAGTGGAAGA TGCAATCGTC 
    ATAGCGGGAT TCAATGAAGT TGGGAAACAA ATACTGTATC AGCTCGGAAC ACACACAGCA 
    AGGAATACGA CGGAGAGACT GCCGCAAATA GTTGCGTTTG ATACCGACCC GATGTTGATA 
    GACAAAACTC TTCTTCCTAT GGAGAATACA GCAGTGATGT ATGGTGATGG CGAGAATCCA 
    GAAGTGATAT CAGCACACGG AGTGCATTCA CCTCGTGCTA TCTTCATTGC GTATGACCAC 
    CACGAAAAGG TCATGGCGGC GACATCTCGA TTGCGAACAA TTTATCCTAA TACACCAATA 
    TACACTCGTG CTCAGACAAG GAAAGAAAGT ATTGAGCTAG AAGTTGCCGG TGCAACAGAA 
    GTCATTGTGG AAAGAGACGA GCTGCCTAGA TCTGCACCCG CCTTACTGCT CCGTAAACGA 
    GCAAGTGAAG CAAGCTCTGC AACACAACAA ACAAAGAACG TCGAATTACT GCAATGGCGG 
    GGTAATAGTA ATAGAACCAA TGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002289652.1
    CDS1..2127
    Translation

    Target ORF information:

    RefSeq Version XM_002289616.2
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 Na+/H+ exchanger partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002289616.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGGAAACAC AACACGTACA TCAACGACGT CGTCGTCGAA GTATCATCTC CAGATGTTCC 
    TCCATCACCA CCTTCCTCAT AACGTGTTGC AGCAGCTGTT GCGATGCATT CCAAACACCA 
    AACCCAACAA ATAGGCTGTC CACAAGATGT ATAACTCCCA TAACATCGTC GTCGTCATCC 
    CTTCAAGCAG CACCCATTCC ATTTCCGGAC ATTCACATCC CTTTCGATGA ACTGAGCCGA 
    CAACTCACCG ACACACTCGA CATTGGAGCC GAGTTCCTCA AAGACTCATC CACATCTCAA 
    AACCAAATAC CAGAAGCTCA AACATCACAA GTATTAGATT CCGTAGGACA GGACTTGCTC 
    ATATTTCTCT TCTCGTCGGT GGTGGTAACG CTTGGATCGA CTGCGTTAAA CATTAGTCCG 
    ATACTTGGGT ATTTGGTGGC GGGGGCGTTA CTTGGCCCTC ATGGATTGGA TGTGTTTTCG 
    AATGCCAAGG CCGATGTCGA GTTGGGAGAC TTTGGTATTC TCTTCTTGCT GTTCTCGGAA 
    GGATTGGAGG TATCATCGGC ACGGTTGAAA AAGCTATCCA ACTATTTGCC ATTGGGGTTT 
    GCACAGATTT CGTTGACTAC GGGAGTCATC ACTGCAGCTA TATTGTTGGG TGCACCGCAG 
    TTCTTGGATA GATTCCTTCC GTTGGATGAA GGGTTCATCG ACATTCGTAA TCCTACAGAA 
    GCAGTGGTGT TGGCACTTGC TGGAACGTTG AGTACGTCAG CTTTTATCTT TCCAGTCTTG 
    AAAGAAAGAG GATGGGAAGG GGAGAATAGT GGGCAGGCTG CCACTTCGAT ATTGTTGCTG 
    CAAGACTTAT TTGTGGCTCC ATTGTTGGTG GTACTTCCCT ATGTCGTTGG GCAAGGTCCA 
    ACAGACTTTG TAGCGATTGG ATTCTTGACC GCAAAAGCTG CAATTGGATT TGGTCTCGTA 
    ATGTATGTCG GCTCATTCCT TCTACAAAGA TTATTTGGAG TGGTGGCACA AACTAGATCA 
    ACAGAAACGT TCGTTGCATT ATCGTTGTTG GTTAGCGTAG GAATGGGAGC GGTAGCACAA 
    TCTTTAGGGT TGACTGATAC AGCAGGAGCG TTCGCGGCAG GTGTTTTGCT TGCCAACACA 
    AACTTTAGAG CACAAATACA AGCAGATGTG TTGCCATTCA AAGGTATTCT TTTGGGAATT 
    TTTTTCATGG ACGCCGGAAG TCTGTTTGAT TCAGACTTGG TACTTGCAGA GTTGCCGACG 
    GTCTTGACGG GTGCAATCGC TCTTATTGTT CTGAAAGCTG TAACTGTCGG TCTGGCAACT 
    CGTGTTCCTC GATGGTTGGA ACCAAATCGT TTAGAGCCTT ACGACGCAGT AAAGCTGTCC 
    TTCCTTCTAT CTGGAGGAGG AGAGTTTGCT TTTGTGGTGT TGGCGCTGGC AGAGAGATTA 
    GAGGTACTCC CGAAAGACTT GGGAGGATTG CTCACAGCTG TTGTGCTAAT CACAATGGCT 
    GTTACTCCGT TGCTTGGCGA GGTAGCCGAG ATTGCATCAA AAGCTTTTGT GTCATATACA 
    GTAAACCAAG GAACGCAAAT ACCAGCAGAA GAGTATGAAG TAGTGGAAGA TGCAATCGTC 
    ATAGCGGGAT TCAATGAAGT TGGGAAACAA ATACTGTATC AGCTCGGAAC ACACACAGCA 
    AGGAATACGA CGGAGAGACT GCCGCAAATA GTTGCGTTTG ATACCGACCC GATGTTGATA 
    GACAAAACTC TTCTTCCTAT GGAGAATACA GCAGTGATGT ATGGTGATGG CGAGAATCCA 
    GAAGTGATAT CAGCACACGG AGTGCATTCA CCTCGTGCTA TCTTCATTGC GTATGACCAC 
    CACGAAAAGG TCATGGCGGC GACATCTCGA TTGCGAACAA TTTATCCTAA TACACCAATA 
    TACACTCGTG CTCAGACAAG GAAAGAAAGT ATTGAGCTAG AAGTTGCCGG TGCAACAGAA 
    GTCATTGTGG AAAGAGACGA GCTGCCTAGA TCTGCACCCG CCTTACTGCT CCGTAAACGA 
    GCAAGTGAAG CAAGCTCTGC AACACAACAA ACAAAGAACG TCGAATTACT GCAATGGCGG 
    GGTAATAGTA ATAGAACCAA TGCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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