Gene Symbol | IL1A |
Entrez Gene ID | 397094 |
Full Name | interleukin 1 alpha |
Synonyms | IL-1alpha |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » IL1A cDNA ORF clone
Gene Symbol | IL1A |
Entrez Gene ID | 397094 |
Full Name | interleukin 1 alpha |
Synonyms | IL-1alpha |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_214029.1 | NP_999194.1 | interleukin-1 alpha precursor |
XM_013987856.1 | XP_013843310.1 | interleukin-1 alpha isoform X1 |
XM_021085846.1 | XP_020941505.1 | interleukin-1 alpha isoform X2 |
XM_005655198.2 | XP_005655255.1 | interleukin-1 alpha isoform X1 |
XM_013987856.2 | XP_013843310.1 | interleukin-1 alpha isoform X1 |
XM_013987857.1 | XP_013843311.1 | interleukin-1 alpha isoform X2 |
XM_013987857.2 | XP_013843311.1 | interleukin-1 alpha isoform X2 |
XM_005655198.3 | XP_005655255.1 | interleukin-1 alpha isoform X1 |
Constitutive repression of interleukin-1alpha in endothelial cells.
Brunn GJ, Saadi S, Platt JL
Circulation research102(7)823-30(2008 Apr)
Linkage maps of porcine chromosomes 3, 6, and 9 based on 31 polymorphic markers.
Johansson M, Ellegren H, Marklund L, Coppieters W, Andersson L
Mammalian genome : official journal of the International Mammalian Genome Society5(12)785-90(1994 Dec)
Mapping of the regulatory type I alpha and catalytic beta subunits of cAMP-dependent protein kinase and interleukin 1 alpha and 1 beta in the pig.
Mellink C, Lahbib-Mansais Y, Yerle M, Gellin J
Mammalian genome : official journal of the International Mammalian Genome Society5(5)298-302(1994 May)
Porcine IL-1 alpha cDNA nucleotide sequence.
Maliszewski CR, Renshaw BR, Schoenborn MA, Urban JF Jr, Baker PE
Nucleic acids research18(14)4282(1990 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following IL1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IL1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214029.1 , XM_013987856.1 , XM_005655198.2 , XM_013987856.2 , XM_005655198.3 | |
Accession Version | NM_214029.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577289600000 | |
Organism | Sus scrofa(pig) | |
Product | interleukin-1 alpha precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X52731.1. Sequence Note: This sequence has been modified as follows: removed 34 bp suspected to be vector contamination from the 5' end. ##Evidence-Data-START## CDS exon combination :: X52731.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN01048242, SAMN01048247 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999194.1 |
CDS | 7..819 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214029.1 , XM_013987856.1 , XM_005655198.2 , XM_013987856.2 , XM_005655198.3 | |
Accession Version | XM_013987856.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | interleukin-1 alpha isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003534458.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013843310.1 |
CDS | 151..963 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214029.1 , XM_013987856.1 , XM_005655198.2 , XM_013987856.2 , XM_005655198.3 | |
Accession Version | XM_005655198.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | interleukin-1 alpha isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003534458.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005655198.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005655255.1 |
CDS | 109..921 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214029.1 , XM_013987856.1 , XM_005655198.2 , XM_013987856.2 , XM_005655198.3 | |
Accession Version | XM_013987856.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | interleukin-1 alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013987856.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013843310.1 |
CDS | 327..1139 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00313 | |
Clone ID Related Accession (Same CDS sequence) | NM_214029.1 , XM_013987856.1 , XM_005655198.2 , XM_013987856.2 , XM_005655198.3 | |
Accession Version | XM_005655198.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 813bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | interleukin-1 alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005655198.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005655255.1 |
CDS | 148..960 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCAAAG TCCCTGACCT CTTTGAAGAC CTGAAGAACT GCTACAGTGA AAATGAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34001 | |
Clone ID Related Accession (Same CDS sequence) | XM_021085846.1 , XM_013987857.1 , XM_013987857.2 | |
Accession Version | XM_021085846.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | interleukin-1 alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020941505.1 |
CDS | 1369..2040 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34001 | |
Clone ID Related Accession (Same CDS sequence) | XM_021085846.1 , XM_013987857.1 , XM_013987857.2 | |
Accession Version | XM_013987857.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | interleukin-1 alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003534458.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013843311.1 |
CDS | 352..1023 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe34001 | |
Clone ID Related Accession (Same CDS sequence) | XM_021085846.1 , XM_013987857.1 , XM_013987857.2 | |
Accession Version | XM_013987857.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | interleukin-1 alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010445.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013987857.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013843311.1 |
CDS | 366..1037 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGATAAAT TTATGCCTCT GAGTACCTCT AAAACCTCTA AGACATCCAG GCTAAACTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Constitutive repression of interleukin-1alpha in endothelial cells. |
Linkage maps of porcine chromosomes 3, 6, and 9 based on 31 polymorphic markers. |
Mapping of the regulatory type I alpha and catalytic beta subunits of cAMP-dependent protein kinase and interleukin 1 alpha and 1 beta in the pig. |
Porcine IL-1 alpha cDNA nucleotide sequence. |