Gene Symbol | ppcs |
Entrez Gene ID | 100195917 |
Full Name | phosphopantothenoylcysteine synthetase |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
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ORF » Species Summary » Salmo salar » ppcs cDNA ORF clone
Gene Symbol | ppcs |
Entrez Gene ID | 100195917 |
Full Name | phosphopantothenoylcysteine synthetase |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
mRNA | Protein | Name |
---|---|---|
XM_014166200.1 | XP_014021675.1 | phosphopantothenate--cysteine ligase isoform X1 |
NM_001140946.1 | NP_001134418.1 | phosphopantothenate--cysteine ligase |
XM_014166201.1 | XP_014021676.1 | phosphopantothenate--cysteine ligase isoform X2 |
XM_014166202.1 | XP_014021677.1 | phosphopantothenate--cysteine ligase isoform X3 |
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome.
Leong JS, Jantzen SG, von Schalburg KR, Cooper GA, Messmer AM, Liao NY, Munro S, Moore R, Holt RA, Jones SJ, Davidson WS, Koop BF
BMC genomics11279(2010 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ppcs gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ppcs cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAt02422 | |
Clone ID Related Accession (Same CDS sequence) | NM_001140946.1 | |
Accession Version | NM_001140946.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1461340800000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | phosphopantothenate--cysteine ligase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT047632.1. ##Evidence-Data-START## Transcript exon combination :: BT047632.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02597923, SAMN02597924 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001134418.1 |
CDS | 68..1027 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt63160 | |
Clone ID Related Accession (Same CDS sequence) | XM_014166200.1 | |
Accession Version | XM_014166200.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 960bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | phosphopantothenate--cysteine ligase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012340459.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014021675.1 |
CDS | 197..1156 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt63161 | |
Clone ID Related Accession (Same CDS sequence) | XM_014166201.1 | |
Accession Version | XM_014166201.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 837bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | phosphopantothenate--cysteine ligase isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012340459.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014021676.1 |
CDS | 109..945 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCAGACC CCAGGACCCT CACTGCAGAA GGGAAGCTGT CTGAAGAGTT TGCTGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt63162 | |
Clone ID Related Accession (Same CDS sequence) | XM_014166202.1 | |
Accession Version | XM_014166202.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 333bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | phosphopantothenate--cysteine ligase isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012340459.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGACCACT TCAGTATGAA GATGGTCCCC AAGATGTTGT CGCCGCTGGT GAAGGACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014021677.1 |
CDS | 443..775 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGACCACT TCAGTATGAA GATGGTCCCC AAGATGTTGT CGCCGCTGGT GAAGGACTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. |