Utp11 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Utp11
Entrez Gene ID	313581
Full Name	UTP11, small subunit processome component
Synonyms	Cgi-94,Cgi94,RGD1559610,Utp11l
General protein information	Preferred Names UTP11, small subunit processome component Names probable U3 small nucleolar RNA-associated protein 11 U3 snoRNA-associated protein 11 UTP11, small subunit processome component homolog UTP11-like, U3 small nucleolar ribonucleoprotein
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 5 Map Location: 5q36
Summary	may have a role in maintainance of neuronal function [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
NM_001107978.2	NP_001101448.1	probable U3 small nucleolar RNA-associated protein 11

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	UTP11L	XP_513332.1
Rattus norvegicus (Norway rat)	Utp11l	NP_001101448.1
Xenopus tropicalis (tropical clawed frog)	utp11l	NP_001165749.1
Oryza sativa (rice)	Os01g0810000	NP_001044580.1
Kluyveromyces lactis	KLLA0F13508g	XP_455688.1
Homo sapiens (human)	UTP11L	NP_057121.2
Drosophila melanogaster (fruit fly)	CG1789	NP_572504.1
Saccharomyces cerevisiae (baker's yeast)	UTP11	NP_012823.2
Gallus gallus (chicken)	UTP11L	XP_417753.1
Caenorhabditis elegans (roundworm)	CELE_C16C10.2	NP_497835.1
Bos taurus (cattle)	UTP11L	NP_001091561.1
Danio rerio (zebrafish)	utp11l	NP_956292.1
Arabidopsis thaliana (thale cress)	EDA14	NP_191595.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP004336	XP_313615.4
Canis lupus familiaris (dog)	UTP11L	XP_532552.1
Mus musculus (house mouse)	Utp11l	NP_080307.1
Eremothecium gossypii	AGOS_ABL032C	NP_982915.1
Schizosaccharomyces pombe (fission yeast)	SPAC18G6.06	NP_593670.1

Gene Ontology
Bibliography

Related articles in PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

Comparative gene identification-94--a pivotal regulator of apoptosis.
Heese K, Nagai Y, Sawada T
Neuroscience116(2)321-4(2003)

Characterizing CGI-94 (comparative gene identification-94) which is down-regulated in the hippocampus of early stage Alzheimer's disease brain.
Heese K, Nakayama T, Hata R, Masumura M, Akatsu H, Li F, Nagai Y, Yamamoto T, Kosaka K, Suemoto T, Sawada T
The European journal of neuroscience15(1)79-86(2002 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Utp11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Utp11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa06408	NM_001107978.2 Latest version!	Rattus norvegicus UTP11, small subunit processome component (Utp11), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Utp11 ( NM_001107978.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001101448.1 Rattus norvegicus UTP11, small subunit processome component (Utp11), mRNA.

Price & Availability↑

CloneID	ORa06408
Clone ID Related Accession (Same CDS sequence)	NM_001107978.2
Accession Version	NM_001107978.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 762bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1541779200000
Organism	Rattus norvegicus(Norway rat)
Product	probable U3 small nucleolar RNA-associated protein 11
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC168964.1. On Sep 4, 2008 this sequence version replaced NM_001107978.1. ##Evidence-Data-START## Transcript exon combination :: BC168964.1, FQ226285.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGTCGGCGG CTTTTCGCAA GGCAGCCAAG ACCCGGCAGC GGGAACACCG AGAACGAAGC 
CAGCCTGGCT TTCGGAAACG CCTGGGTTTG CTAGAGAAAA AGAAAGATTA CAAACTCCGT 
GCAAATGACT ATCATAAAAA ACAAGATTTC CTCAGAGCTC TCCGGAAGAA GGCTCTTGAA 
AAAAATCCAG ATGAATTCTA CTATAAAATG ACTCGGGCCA AGCTCCAGGA CGGAGTTCAT 
ATTTTCAAAG ACAACAAGGA AGAAGTGACA GCAGAGCAGC TAAAACTGAT GAGAACTCAG 
GACATCAAGT ACATAGAGAT GAAGAGGGTG GCGGAGGCGA AGAAAATTGA AAGACTGAAA 
TCAGAGCTCC ACCTGCTGGA TGTCCAGGGG AAGCAACAGA ATAAGCACGT GTTCTTTTTT 
GACACCAAAA AGGAAGTTGA ACAGTTTGAT GTTGCGACTC ACTTGCAGAC GGCCCCAGAA 
CTACTCGATA GGGTCTATAA TAGACCCAGA ATAGAGACCT TGCAGAAGGA GAGAGTGAAA 
GGAGTTACCC CTCAGACTCG CCTCAAGCGG ATAGCCAAAG AACGACAAAA GCAGTATGAC 
TGCTTGACAC AGCGCATCGA GCGGGAGAAG CAGCTGTTTG TTGTTGCCCA GAAAATCCAG 
ACACGCAAAG ACCTCATGGA TAAAACTCAG AAGGTGAAGG TGAAGAAAGA AACAGTAAAC 
TCCCCAGCGA TATACAGATT CCAGACTCGC CGGAAACGTT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001101448.1
CDS	69..830
Translation	MSAAFRKAAKTRQREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTRAKLQDGVHIFKDNKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDVQGKQQNKHVFFFDTKKEVEQFDVATHLQTAPELLDRVYNRPRIETLQKERVKGVTPQTRLKRIAKERQKQYDCLTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSPAIYRFQTRRKR

Target ORF information:

RefSeq Version	NM_001107978.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus UTP11, small subunit processome component (Utp11), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001107978.2

ORF Insert Sequence:

ATGTCGGCGG CTTTTCGCAA GGCAGCCAAG ACCCGGCAGC GGGAACACCG AGAACGAAGC 
CAGCCTGGCT TTCGGAAACG CCTGGGTTTG CTAGAGAAAA AGAAAGATTA CAAACTCCGT 
GCAAATGACT ATCATAAAAA ACAAGATTTC CTCAGAGCTC TCCGGAAGAA GGCTCTTGAA 
AAAAATCCAG ATGAATTCTA CTATAAAATG ACTCGGGCCA AGCTCCAGGA CGGAGTTCAT 
ATTTTCAAAG ACAACAAGGA AGAAGTGACA GCAGAGCAGC TAAAACTGAT GAGAACTCAG 
GACATCAAGT ACATAGAGAT GAAGAGGGTG GCGGAGGCGA AGAAAATTGA AAGACTGAAA 
TCAGAGCTCC ACCTGCTGGA TGTCCAGGGG AAGCAACAGA ATAAGCACGT GTTCTTTTTT 
GACACCAAAA AGGAAGTTGA ACAGTTTGAT GTTGCGACTC ACTTGCAGAC GGCCCCAGAA 
CTACTCGATA GGGTCTATAA TAGACCCAGA ATAGAGACCT TGCAGAAGGA GAGAGTGAAA 
GGAGTTACCC CTCAGACTCG CCTCAAGCGG ATAGCCAAAG AACGACAAAA GCAGTATGAC 
TGCTTGACAC AGCGCATCGA GCGGGAGAAG CAGCTGTTTG TTGTTGCCCA GAAAATCCAG 
ACACGCAAAG ACCTCATGGA TAAAACTCAG AAGGTGAAGG TGAAGAAAGA AACAGTAAAC 
TCCCCAGCGA TATACAGATT CCAGACTCGC CGGAAACGTT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanhäusser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M

Comparative gene identification-94--a pivotal regulator of apoptosis.
Neuroscience116(2)321-4(2003)
Heese K,Nagai Y,Sawada T

Characterizing CGI-94 (comparative gene identification-94) which is down-regulated in the hippocampus of early stage Alzheimer's disease brain.
The European journal of neuroscience15(1)79-86(2002 Jan)
Heese K,Nakayama T,Hata R,Masumura M,Akatsu H,Li F,Nagai Y,Yamamoto T,Kosaka K,Suemoto T,Sawada T

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Utp11 cDNA ORF clone, Rattus norvegicus(Norway rat)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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