ORF » Species Summary » Populus trichocarpa » POPTR_0001s04730g cDNA ORF clone

POPTR_0001s04730g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s04730g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s04730g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01779 XM_002299099.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s04730g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa422526 XM_024587401.1
Latest version!		 Populus trichocarpa metal tolerance protein 4 (LOC7483266), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s04730g ( XM_002299099.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002299135.2 Populus trichocarpa hypothetical protein (POPTR_0001s04730g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01779
    Clone ID Related Accession (Same CDS sequence) XM_002299099.2
    Accession Version XM_002299099.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 597bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299099.1. COMPLETENESS: incomplete on the 3' end. 

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    541
    ATGGAAACTG ATACAATTTA TATTGATCCT GAAGAGCTTA TTGTAAATGA ACCACGTCCA 
    AAGATATTCT CATATCAACT ACAATGGCTT TACATGATAA TGATAATGGT AACTGCTACT 
    GTGGGGAAAC TAGCACTTTG GATTTACTGT AGAAGCTCAG GAAACAGTAC TGCCCGTGCT 
    TATGCAAAGG ATCACTATTT TGACGTGGTG ACGAATGCGG TAGGATTAGT TGCTGCTGTT 
    CTTGGGGATA AATATTACTG GTGGATTGAC CCTGCTGGAG CTATTCTTCT TGCAATTTAC 
    ACAATTACAA ATTGGTCTGG AACTGCTTTT GAAAATGCAG TTTCTCTTGC TGGGAAATCA 
    GTTTCTCCCG AAATCTTGCA GAAATTGACA TATCTTGTCA CAAGGCACCC TCAAGTCGAG 
    CGTGTTGACA TTGAACTTCC AGAAGAGCTA CCTCTAAAGG AAGCACACGC TATTGGAGAG 
    ACATTGCAGA GCAAGATTGA GAAGCTCCCA GAAGTTGAGC GGGCATTCGT TCATCTTGAT 
    GACGAATGTG AACACAAACT GGAGCACACT GTTCTCAGCA GGTTACCTAA TGGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299135.2
    CDS58..654
    Translation

    Target ORF information:

    RefSeq Version XM_002299099.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s04730g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002299099.2

    ORF Insert Sequence:

    1
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    421
    481
    541
    ATGGAAACTG ATACAATTTA TATTGATCCT GAAGAGCTTA TTGTAAATGA ACCACGTCCA 
    AAGATATTCT CATATCAACT ACAATGGCTT TACATGATAA TGATAATGGT AACTGCTACT 
    GTGGGGAAAC TAGCACTTTG GATTTACTGT AGAAGCTCAG GAAACAGTAC TGCCCGTGCT 
    TATGCAAAGG ATCACTATTT TGACGTGGTG ACGAATGCGG TAGGATTAGT TGCTGCTGTT 
    CTTGGGGATA AATATTACTG GTGGATTGAC CCTGCTGGAG CTATTCTTCT TGCAATTTAC 
    ACAATTACAA ATTGGTCTGG AACTGCTTTT GAAAATGCAG TTTCTCTTGC TGGGAAATCA 
    GTTTCTCCCG AAATCTTGCA GAAATTGACA TATCTTGTCA CAAGGCACCC TCAAGTCGAG 
    CGTGTTGACA TTGAACTTCC AGAAGAGCTA CCTCTAAAGG AAGCACACGC TATTGGAGAG 
    ACATTGCAGA GCAAGATTGA GAAGCTCCCA GAAGTTGAGC GGGCATTCGT TCATCTTGAT 
    GACGAATGTG AACACAAACT GGAGCACACT GTTCTCAGCA GGTTACCTAA TGGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s04730g ( XM_024587401.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024443169.1 Populus trichocarpa metal tolerance protein 4 (LOC7483266), mRNA.
    Price & Availability↑
    CloneID OPa422526
    Clone ID Related Accession (Same CDS sequence) XM_024587401.1
    Accession Version XM_024587401.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 492bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product metal tolerance protein 4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

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    ATGGTAACTG CTACTGTGGG GAAACTAGCA CTTTGGATTT ACTGTAGAAG CTCAGGAAAC 
    AGTATTGCCC GTGCTTATGC AAAGGATCAC TATTTTGACG TGGTGACGAA TGCGGTAGGA 
    TTAGTTGCTG CTGTTCTTGG GGATAAATAT TACTGGTGGA TTGACCCTGC TGGAGCTATT 
    CTTCTTGCAA TTTACACAAT TACAAATTGG TCTGGAACTG CTTTTGAAAA TGCAGTTTCT 
    CTTGCTGGGA AATCAGTTTC TCCCGAAATC TTGCAGAAAT TGACATATCT TGTCACAAGG 
    CACCCTCAAG TCGAGCGTGT TGACATTGAA CTTCCAGAAG AGCTACCTCT AAAGGAAGCA 
    CACGCTATTG GAGAGACATT GCAGAGCAAG ATTGAGAAGC TCCCAGAAGT TGAGCGGGCA 
    TTCGTTCATC TTGATGACGA ATGTGAACAC AAACTGGAGC ACACTGTTCT CAGCAGGTTA 
    CCTAATGGAT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024443169.1
    CDS1..492
    Translation

    Target ORF information:

    RefSeq Version XM_024587401.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa metal tolerance protein 4 (LOC7483266), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024587401.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGTAACTG CTACTGTGGG GAAACTAGCA CTTTGGATTT ACTGTAGAAG CTCAGGAAAC 
    AGTATTGCCC GTGCTTATGC AAAGGATCAC TATTTTGACG TGGTGACGAA TGCGGTAGGA 
    TTAGTTGCTG CTGTTCTTGG GGATAAATAT TACTGGTGGA TTGACCCTGC TGGAGCTATT 
    CTTCTTGCAA TTTACACAAT TACAAATTGG TCTGGAACTG CTTTTGAAAA TGCAGTTTCT 
    CTTGCTGGGA AATCAGTTTC TCCCGAAATC TTGCAGAAAT TGACATATCT TGTCACAAGG 
    CACCCTCAAG TCGAGCGTGT TGACATTGAA CTTCCAGAAG AGCTACCTCT AAAGGAAGCA 
    CACGCTATTG GAGAGACATT GCAGAGCAAG ATTGAGAAGC TCCCAGAAGT TGAGCGGGCA 
    TTCGTTCATC TTGATGACGA ATGTGAACAC AAACTGGAGC ACACTGTTCT CAGCAGGTTA 
    CCTAATGGAT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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