ORF » Species Summary » Populus trichocarpa » LOC7470743 cDNA ORF clone

LOC7470743 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7470743 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7470743 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa14754 XM_002309507.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0006s25490g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa432704 XM_002309507.2
Latest version!		 Populus trichocarpa carotenoid cleavage dioxygenase 8 homolog B, chloroplastic (LOC7470743), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7470743 ( XM_002309507.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002309543.1 Populus trichocarpa hypothetical protein (POPTR_0006s25490g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa14754
    Clone ID Related Accession (Same CDS sequence) XM_002309507.1
    Accession Version XM_002309507.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1674bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCCT TGGCATTTTC CGCTAGTATT GGTCGCTCTA TTTCACCATC AAATGCAATG 
    GTTTCTGATA AATTTGAGAG CAGAAGAGAA GGGTTTTCCC TAGGCAAGGG TACTTTTGCA 
    AGAAAACGTG ACCCTCGGGA CTCAATGGTC CCGAAAGTTG CAACCCAAGC ACCAACTGTG 
    TTTCCATCAC TGGAGAAGGA ACTTGCTGGT GACCGGAATC ATGTTGCATG GACAAGTGTC 
    CAGCAAGAAA GATACGAAGG AGAGCTTGAT GTTCAAGGAG AAATTCCACT GTGGTTGAGT 
    GGAACGTATC TTAGAAATGG TCCGGGCATG TGGCACGTAG GGGACTACAA CTTCCGGCAC 
    CTTTTCGATG GCTATGCCAC ATTAGTCAGA CTCCACTTTG AAAATGGTCG ATTAATCGCC 
    GCCCACCGCC AAATCGAATC GGAGGCTTAC AAGGCGGCAA AGACGAATAA CAAACTATGT 
    TACCGTGAAT TTTCTGAGGT CCCAAAGCCT GACAATTTCC TGTCCTACGT AGGGGAACTA 
    GTTAACCTAT TCTCCGGAGC GTCATTGACC GATAACGCTA ACACTGGCGT GGTCAAGCTC 
    GGTGATGGAC GTGTTGTTTG CCTAACTGAA ACACAGAAAG GGTCAATAGT TGTTGATCCA 
    AACACCTTGG ACACGTTAGG GAAATTTGAA TATAGCGATT CACTAGGGGG TCTAATACAT 
    TCGGCACATC CAATAGTGAC AGACACTGAG TTCTTAACCT TGTTGCCTGA TTTGTTCAGG 
    CCCGGATACT TGGTGGTGAG GATGGAGCCT GGAAGTAACG AGAGGAAAGT AATCGGACGG 
    GTGGATTGTC GTGGAGGTCC TGCTCCGGGA TGGGTCCACT CGTTTCCGGT TACTGAACAC 
    TATGTGATAG TGCCAGAAAT GCCGTTGAGA TACTGTGCAC AAAATTTGCT AAGAGCTGAG 
    CCCACACCTT TGTACAAGTT TGAGTGGCAC CCGGATTCCA AAGGGTTTAT GCATGTTATG 
    TGTAAAGCTA GTGGCAAGAT TGTGGCAAGT GTGGAAGTGC CTCTATTTGT AACATTCCAT 
    TTCATCAATG CTTATGAAGA GAAAGATGAA GATGGGAGGG TGACTGCCGT CATTGCCGAT 
    TGTTGTGAGC ATAATTCGGA CACGACAATC TTAGAGAAGC TAAGTCTACA AAATCTACGG 
    TCTTTCATGG GTGAAGATGT CCTACCAGAT GCTAGGGTCG GGAGGTTCAT AATTCCTTTG 
    GACGGGAGTC CATATGGGAA ATTGGAGGCA GCACTGGACC CAGAAGAGCA TGGGAAAGGA 
    ATGGACATGT GCAGCATTAA CCCTGCATAT TTGGGCAAAA AATACAGATA TGCTTATGCT 
    TGTGGAGCAC AACGCCCTTG TAACTTCCCC AACACCCTCA CTAAGATTGA CTTGCTCGAG 
    AAGAAGGCAA AGAATTGGTA TGAAGAGGGT GCTGTGCCCT CGGAACCATT TTTTGTGGCT 
    CGCCCAGGTG CTACAGAAGA GGATGATGGT GTGGTGATCT CCATGATCAG TGAGAAAAAT 
    GGAGATGGAT ATGCACTGTT ATTAGATGGA TCAACATTTG AAGAGATTGC AAGAGGAAAG 
    TTCCCTTACG GTCTACCATA TGGATTACAT GGATGCTGGG TGCCAAAGAA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309543.1
    CDS1..1674
    Translation

    Target ORF information:

    RefSeq Version XM_002309507.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s25490g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309507.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCCT TGGCATTTTC CGCTAGTATT GGTCGCTCTA TTTCACCATC AAATGCAATG 
    GTTTCTGATA AATTTGAGAG CAGAAGAGAA GGGTTTTCCC TAGGCAAGGG TACTTTTGCA 
    AGAAAACGTG ACCCTCGGGA CTCAATGGTC CCGAAAGTTG CAACCCAAGC ACCAACTGTG 
    TTTCCATCAC TGGAGAAGGA ACTTGCTGGT GACCGGAATC ATGTTGCATG GACAAGTGTC 
    CAGCAAGAAA GATACGAAGG AGAGCTTGAT GTTCAAGGAG AAATTCCACT GTGGTTGAGT 
    GGAACGTATC TTAGAAATGG TCCGGGCATG TGGCACGTAG GGGACTACAA CTTCCGGCAC 
    CTTTTCGATG GCTATGCCAC ATTAGTCAGA CTCCACTTTG AAAATGGTCG ATTAATCGCC 
    GCCCACCGCC AAATCGAATC GGAGGCTTAC AAGGCGGCAA AGACGAATAA CAAACTATGT 
    TACCGTGAAT TTTCTGAGGT CCCAAAGCCT GACAATTTCC TGTCCTACGT AGGGGAACTA 
    GTTAACCTAT TCTCCGGAGC GTCATTGACC GATAACGCTA ACACTGGCGT GGTCAAGCTC 
    GGTGATGGAC GTGTTGTTTG CCTAACTGAA ACACAGAAAG GGTCAATAGT TGTTGATCCA 
    AACACCTTGG ACACGTTAGG GAAATTTGAA TATAGCGATT CACTAGGGGG TCTAATACAT 
    TCGGCACATC CAATAGTGAC AGACACTGAG TTCTTAACCT TGTTGCCTGA TTTGTTCAGG 
    CCCGGATACT TGGTGGTGAG GATGGAGCCT GGAAGTAACG AGAGGAAAGT AATCGGACGG 
    GTGGATTGTC GTGGAGGTCC TGCTCCGGGA TGGGTCCACT CGTTTCCGGT TACTGAACAC 
    TATGTGATAG TGCCAGAAAT GCCGTTGAGA TACTGTGCAC AAAATTTGCT AAGAGCTGAG 
    CCCACACCTT TGTACAAGTT TGAGTGGCAC CCGGATTCCA AAGGGTTTAT GCATGTTATG 
    TGTAAAGCTA GTGGCAAGAT TGTGGCAAGT GTGGAAGTGC CTCTATTTGT AACATTCCAT 
    TTCATCAATG CTTATGAAGA GAAAGATGAA GATGGGAGGG TGACTGCCGT CATTGCCGAT 
    TGTTGTGAGC ATAATTCGGA CACGACAATC TTAGAGAAGC TAAGTCTACA AAATCTACGG 
    TCTTTCATGG GTGAAGATGT CCTACCAGAT GCTAGGGTCG GGAGGTTCAT AATTCCTTTG 
    GACGGGAGTC CATATGGGAA ATTGGAGGCA GCACTGGACC CAGAAGAGCA TGGGAAAGGA 
    ATGGACATGT GCAGCATTAA CCCTGCATAT TTGGGCAAAA AATACAGATA TGCTTATGCT 
    TGTGGAGCAC AACGCCCTTG TAACTTCCCC AACACCCTCA CTAAGATTGA CTTGCTCGAG 
    AAGAAGGCAA AGAATTGGTA TGAAGAGGGT GCTGTGCCCT CGGAACCATT TTTTGTGGCT 
    CGCCCAGGTG CTACAGAAGA GGATGATGGT GTGGTGATCT CCATGATCAG TGAGAAAAAT 
    GGAGATGGAT ATGCACTGTT ATTAGATGGA TCAACATTTG AAGAGATTGC AAGAGGAAAG 
    TTCCCTTACG GTCTACCATA TGGATTACAT GGATGCTGGG TGCCAAAGAA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7470743 ( XM_002309507.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002309543.1 Populus trichocarpa carotenoid cleavage dioxygenase 8 homolog B, chloroplastic (LOC7470743), mRNA.
    Price & Availability↑
    CloneID OPa432704
    Clone ID Related Accession (Same CDS sequence) XM_002309507.2
    Accession Version XM_002309507.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1674bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product carotenoid cleavage dioxygenase 8 homolog B, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002309507.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCCT TGGCATTTTC CGCTAGTATT GGTCGCTCTA TTTCACCATC AAATGCAATG 
    GTTTCTGATA AATTTGAGAG CAGAAGAGAA GGGTTTTCCC TAGGCAAGGG TACTTTTGCA 
    AGAAAACGTG ACCCTCGGGA CTCAATGGTC CCGAAAGTTG CAACCCAAGC ACCAACTGTG 
    TTTCCATCAC TGGAGAAGGA ACTTGCTGGT GACCGGAATC ATGTTGCATG GACAAGTGTC 
    CAGCAAGAAA GATACGAAGG AGAGCTTGAT GTTCAAGGAG AAATTCCACT GTGGTTGAGT 
    GGAACGTATC TTAGAAATGG TCCGGGCATG TGGCACGTAG GGGACTACAA CTTCCGGCAC 
    CTTTTCGATG GCTATGCCAC ATTAGTCAGA CTCCACTTTG AAAATGGTCG ATTAATCGCC 
    GCCCACCGCC AAATCGAATC GGAGGCTTAC AAGGCGGCAA AGACGAATAA CAAACTATGT 
    TACCGTGAAT TTTCTGAGGT CCCAAAGCCT GACAATTTCC TGTCCTACGT AGGGGAACTA 
    GTTAACCTAT TCTCCGGAGC GTCATTGACC GATAACGCTA ACACTGGCGT GGTCAAGCTC 
    GGTGATGGAC GTGTTGTTTG CCTAACTGAA ACACAGAAAG GGTCAATAGT TGTTGATCCA 
    AACACCTTGG ACACGTTAGG GAAATTTGAA TATAGCGATT CACTAGGGGG TCTAATACAT 
    TCGGCACATC CAATAGTGAC AGACACTGAG TTCTTAACCT TGTTGCCTGA TTTGTTCAGG 
    CCCGGATACT TGGTGGTGAG GATGGAGCCT GGAAGTAACG AGAGGAAAGT AATCGGACGG 
    GTGGATTGTC GTGGAGGTCC TGCTCCGGGA TGGGTCCACT CGTTTCCGGT TACTGAACAC 
    TATGTGATAG TGCCAGAAAT GCCGTTGAGA TACTGTGCAC AAAATTTGCT AAGAGCTGAG 
    CCCACACCTT TGTACAAGTT TGAGTGGCAC CCGGATTCCA AAGGGTTTAT GCATGTTATG 
    TGTAAAGCTA GTGGCAAGAT TGTGGCAAGT GTGGAAGTGC CTCTATTTGT AACATTCCAT 
    TTCATCAATG CTTATGAAGA GAAAGATGAA GATGGGAGGG TGACTGCCGT CATTGCCGAT 
    TGTTGTGAGC ATAATTCGGA CACGACAATC TTAGAGAAGC TAAGTCTACA AAATCTACGG 
    TCTTTCATGG GTGAAGATGT CCTACCAGAT GCTAGGGTCG GGAGGTTCAT AATTCCTTTG 
    GACGGGAGTC CATATGGGAA ATTGGAGGCA GCACTGGACC CGGAAGAGCA TGGGAAAGGA 
    ATGGACATGT GCAGCATTAA CCCTGCATAT TTGGGCAAAA AATACAGATA TGCTTATGCT 
    TGTGGAGCAC AACGCCCTTG TAACTTCCCC AACACCCTCA CTAAGATTGA CTTGCTCGAG 
    AAGAAGGCAA AGAATTGGTA TGAAGAGGGT GCTGTGCCCT CGGAACCATT TTTTGTGGCT 
    CGCCCAGGTG CTACAGAAGA GGATGATGGT GTGGTGATCT CCATGATCAG TGAGAAAAAT 
    GGAGATGGAT ATGCACTGTT ATTAGATGGA TCAACATTTG AAGAGATTGC AAGAGGAAAG 
    TTCCCTTACG GTCTACCATA TGGATTACAT GGATGCTGGG TGCCAAAGAA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309543.1
    CDS76..1749
    Translation

    Target ORF information:

    RefSeq Version XM_002309507.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa carotenoid cleavage dioxygenase 8 homolog B, chloroplastic (LOC7470743), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309507.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGCTTCCT TGGCATTTTC CGCTAGTATT GGTCGCTCTA TTTCACCATC AAATGCAATG 
    GTTTCTGATA AATTTGAGAG CAGAAGAGAA GGGTTTTCCC TAGGCAAGGG TACTTTTGCA 
    AGAAAACGTG ACCCTCGGGA CTCAATGGTC CCGAAAGTTG CAACCCAAGC ACCAACTGTG 
    TTTCCATCAC TGGAGAAGGA ACTTGCTGGT GACCGGAATC ATGTTGCATG GACAAGTGTC 
    CAGCAAGAAA GATACGAAGG AGAGCTTGAT GTTCAAGGAG AAATTCCACT GTGGTTGAGT 
    GGAACGTATC TTAGAAATGG TCCGGGCATG TGGCACGTAG GGGACTACAA CTTCCGGCAC 
    CTTTTCGATG GCTATGCCAC ATTAGTCAGA CTCCACTTTG AAAATGGTCG ATTAATCGCC 
    GCCCACCGCC AAATCGAATC GGAGGCTTAC AAGGCGGCAA AGACGAATAA CAAACTATGT 
    TACCGTGAAT TTTCTGAGGT CCCAAAGCCT GACAATTTCC TGTCCTACGT AGGGGAACTA 
    GTTAACCTAT TCTCCGGAGC GTCATTGACC GATAACGCTA ACACTGGCGT GGTCAAGCTC 
    GGTGATGGAC GTGTTGTTTG CCTAACTGAA ACACAGAAAG GGTCAATAGT TGTTGATCCA 
    AACACCTTGG ACACGTTAGG GAAATTTGAA TATAGCGATT CACTAGGGGG TCTAATACAT 
    TCGGCACATC CAATAGTGAC AGACACTGAG TTCTTAACCT TGTTGCCTGA TTTGTTCAGG 
    CCCGGATACT TGGTGGTGAG GATGGAGCCT GGAAGTAACG AGAGGAAAGT AATCGGACGG 
    GTGGATTGTC GTGGAGGTCC TGCTCCGGGA TGGGTCCACT CGTTTCCGGT TACTGAACAC 
    TATGTGATAG TGCCAGAAAT GCCGTTGAGA TACTGTGCAC AAAATTTGCT AAGAGCTGAG 
    CCCACACCTT TGTACAAGTT TGAGTGGCAC CCGGATTCCA AAGGGTTTAT GCATGTTATG 
    TGTAAAGCTA GTGGCAAGAT TGTGGCAAGT GTGGAAGTGC CTCTATTTGT AACATTCCAT 
    TTCATCAATG CTTATGAAGA GAAAGATGAA GATGGGAGGG TGACTGCCGT CATTGCCGAT 
    TGTTGTGAGC ATAATTCGGA CACGACAATC TTAGAGAAGC TAAGTCTACA AAATCTACGG 
    TCTTTCATGG GTGAAGATGT CCTACCAGAT GCTAGGGTCG GGAGGTTCAT AATTCCTTTG 
    GACGGGAGTC CATATGGGAA ATTGGAGGCA GCACTGGACC CGGAAGAGCA TGGGAAAGGA 
    ATGGACATGT GCAGCATTAA CCCTGCATAT TTGGGCAAAA AATACAGATA TGCTTATGCT 
    TGTGGAGCAC AACGCCCTTG TAACTTCCCC AACACCCTCA CTAAGATTGA CTTGCTCGAG 
    AAGAAGGCAA AGAATTGGTA TGAAGAGGGT GCTGTGCCCT CGGAACCATT TTTTGTGGCT 
    CGCCCAGGTG CTACAGAAGA GGATGATGGT GTGGTGATCT CCATGATCAG TGAGAAAAAT 
    GGAGATGGAT ATGCACTGTT ATTAGATGGA TCAACATTTG AAGAGATTGC AAGAGGAAAG 
    TTCCCTTACG GTCTACCATA TGGATTACAT GGATGCTGGG TGCCAAAGAA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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