ORF » Species Summary » Populus trichocarpa » POPTR_0001s22780g cDNA ORF clone

POPTR_0001s22780g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s22780g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s22780g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa00767 XM_002298252.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s22780g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa422760 XM_024589979.1
Latest version!		 Populus trichocarpa UBP1-associated protein 2A (LOC7467969), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s22780g ( XM_002298252.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298288.1 Populus trichocarpa hypothetical protein (POPTR_0001s22780g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa00767
    Clone ID Related Accession (Same CDS sequence) XM_002298252.2
    Accession Version XM_002298252.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1260bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298252.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTCAAGA AACGAAAGCC CACTTCCAAA CCCCAACAAC CATCCTCTTC TAAACAACCC 
    AAAATTGAAA AGCCCCCGCA GCCTCCACCA CCTTCCTCAG AAGCCGAAGA AGTAGCAGCA 
    GTGGTAGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG AGGAGGAAGA AGAAGAAGGA 
    GACAGATCCG AAGAGGAGGA GGAATCTGAA TCTGAATCCG AAGAAGAAGA AGAAGAAAGC 
    GAAGATTCTA AACGAGAAAC CATAAGCAAA ATCTTACAAC CCTTCACTAA AGAACTACTT 
    ATCAAAATCC TCAAAGAAGC AGCCTCCACT GACCCATGTA TCGCCACAGA AATCTTCAAC 
    TCCGTCGATT CTGACCCAGT CCACCGCAAA ATCTTCGTTC ACGGACTCGG TTGGGATGCC 
    CACAACGAAA CCCTTATCTC AGTTTTCAAA AAATACGGTG AAATTGAGGA ATGCAAGATT 
    GTAACTGATA AGGCTACAGG TCGCTCAAAA GGGTATGGTT TTCTTCTCTT TAAAACGCGA 
    ATTGCTGCGC GGAAAGCGCT TAAAGAGCCA CAAAAAAAGG TGGGGAATCG AACGGTTTCG 
    TGTCAATTGG CGTCTTTAGG AAAGGGGCAG AATCAGAAAC AGGACAATAG CTCTGATGTC 
    AGTTTGAGGA AATTGTACAT AGGGAATGTG GGTCCGCAGA TTAGTGTGGA GAATCTTAGA 
    GAGTTTTTTG CTCAGTTTGG AGAAATTGAA GATGGGCCAT CAGGTTTTGA TAAGAGTACT 
    ATGAAGTTTA GGGGTTTTGC CTTTATTGTT TATAAGAGTT TAGAGGGGAT TAGGAAGGCA 
    TTAGAAGAGC CTGTTAAGGT TTTTGAAGGT TTAAAGTTGC AGTGTTCACT ATCTACTAAG 
    AATAGCAGTG GTGGTGGTGG TGCAGTTTTC TTGGGGCAGA ATCCTGCTTT GGGGGTTTTG 
    AATCCGGTGC TGGGTCTAGG TGTTGGTGCA GGTGGGATGC TGAATCAGAC AGGGTTGAGT 
    CCATTGTTTC CTGGTGGGGT TTCGCAGCCT TTGAACAGAG TTGGGAATGT TGGTCCTTCT 
    ATTGGATTGG GTGCAGGATT TACCACACAG CATGGGATTA ATACTATAAG CAACAGTATG 
    ATTGGTAGTT ATAATTCTCA GGCTGCTTTG CAGGGATTGG GAACAGGACG CCAGGGAAAT 
    GGGAGATACT GGATTCGAGT TCATAATAAC AATACCCTCG CCGGACACGG ATGCAGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298288.1
    CDS125..1384
    Translation

    Target ORF information:

    RefSeq Version XM_002298252.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s22780g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298252.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTCAAGA AACGAAAGCC CACTTCCAAA CCCCAACAAC CATCCTCTTC TAAACAACCC 
    AAAATTGAAA AGCCCCCGCA GCCTCCACCA CCTTCCTCAG AAGCCGAAGA AGTAGCAGCA 
    GTGGTAGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG AGGAGGAAGA AGAAGAAGGA 
    GACAGATCCG AAGAGGAGGA GGAATCTGAA TCTGAATCCG AAGAAGAAGA AGAAGAAAGC 
    GAAGATTCTA AACGAGAAAC CATAAGCAAA ATCTTACAAC CCTTCACTAA AGAACTACTT 
    ATCAAAATCC TCAAAGAAGC AGCCTCCACT GACCCATGTA TCGCCACAGA AATCTTCAAC 
    TCCGTCGATT CTGACCCAGT CCACCGCAAA ATCTTCGTTC ACGGACTCGG TTGGGATGCC 
    CACAACGAAA CCCTTATCTC AGTTTTCAAA AAATACGGTG AAATTGAGGA ATGCAAGATT 
    GTAACTGATA AGGCTACAGG TCGCTCAAAA GGGTATGGTT TTCTTCTCTT TAAAACGCGA 
    ATTGCTGCGC GGAAAGCGCT TAAAGAGCCA CAAAAAAAGG TGGGGAATCG AACGGTTTCG 
    TGTCAATTGG CGTCTTTAGG AAAGGGGCAG AATCAGAAAC AGGACAATAG CTCTGATGTC 
    AGTTTGAGGA AATTGTACAT AGGGAATGTG GGTCCGCAGA TTAGTGTGGA GAATCTTAGA 
    GAGTTTTTTG CTCAGTTTGG AGAAATTGAA GATGGGCCAT CAGGTTTTGA TAAGAGTACT 
    ATGAAGTTTA GGGGTTTTGC CTTTATTGTT TATAAGAGTT TAGAGGGGAT TAGGAAGGCA 
    TTAGAAGAGC CTGTTAAGGT TTTTGAAGGT TTAAAGTTGC AGTGTTCACT ATCTACTAAG 
    AATAGCAGTG GTGGTGGTGG TGCAGTTTTC TTGGGGCAGA ATCCTGCTTT GGGGGTTTTG 
    AATCCGGTGC TGGGTCTAGG TGTTGGTGCA GGTGGGATGC TGAATCAGAC AGGGTTGAGT 
    CCATTGTTTC CTGGTGGGGT TTCGCAGCCT TTGAACAGAG TTGGGAATGT TGGTCCTTCT 
    ATTGGATTGG GTGCAGGATT TACCACACAG CATGGGATTA ATACTATAAG CAACAGTATG 
    ATTGGTAGTT ATAATTCTCA GGCTGCTTTG CAGGGATTGG GAACAGGACG CCAGGGAAAT 
    GGGAGATACT GGATTCGAGT TCATAATAAC AATACCCTCG CCGGACACGG ATGCAGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s22780g ( XM_024589979.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024445747.1 Populus trichocarpa UBP1-associated protein 2A (LOC7467969), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa422760
    Clone ID Related Accession (Same CDS sequence) XM_024589979.1
    Accession Version XM_024589979.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1425bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product UBP1-associated protein 2A
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGTCAAGA AACGAAAGCC CACTTCCAAA CCCCAACAAC CATCCTCTTC TAAACAACCC 
    AAAATTGAAA AGCCCCCGCA GCCTCCACCA CCTTCCTCAG AAGCCGAAGA AGTAGCAGCA 
    GTGGTAGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG AGGAGGAAGG AGACAGTTCC 
    TCGTCAGAAA CAGAGTCAGG GGATTCAGGA TCCGAAGAGG AGGAGGAATC TGAATCTGAA 
    TCCGAAGAAG AAGAAGAAGA AAGCGAAGAT TCTAAACGAG AAACCATAAG CAAAATCTTA 
    CAACCCTTCA CTAAAGAACT ACTTATCAAA ATCCTCAAAG AAGCAGCCTC CACTGACCCA 
    TGTATCGCCA CAGAAATCTT CAACTCCGTC GATTCTGACC CAGTCCACCG CAAAATCTTC 
    GTTCACGGAC TCGGTTGGGA TGCCCACAAC GAAACCCTTA TCTCAGTTTT CAAAAAATAC 
    GGTGAAATTG AGGAATGCAA GATTGTAACT GATAAGGCTA CAGGTCGCTC AAAAGGGTAT 
    GGTTTTCTTC TCTTTAAAAC GCGAATTGCT GCGCGGAAAG CGCTTAAAGA GCCACAAAAA 
    AAGGTGGGGA ATCGAACGGT TTCGTGTCAA TTGGCGTCTT TAGGAAAGGG GCAGAATCAG 
    AAACAGGACA ATAGCTCTGA TGTCAGTTTG AGGAAATTGT ACATAGGGAA TGTGGGTCCG 
    CAGATTAGTG TGGAGAATCT TAGAGAGTTT TTTGCTCAGT TTGGAGAAAT TGAAGATGGG 
    CCATCAGGTT TTGATAAGAG TACTATGAAG TTTAGGGGTT TTGCCTTTAT TGTTTATAAG 
    AGTTTAGAGG GGATTAGGAA GGCATTAGAA GAGCCTGTTA AGGTTTTTGA AGGTTTAAAG 
    TTGCAGTGTT CACTATCTAC TAAGAATAGC AGTGGTGGTG GTGGTAATGC TAATGTTGCG 
    GAGGCGTCCA GTGCTGGTGC TGGTAACAAT GCAGGAGTTG TGCAGGGAAA TTTGGGAATT 
    CAGGGTTTAT TGAACCAGGG AATGGTGGGG CAGAGTGTGA ATCCAACAGG TGCAGTTTTC 
    TTGGGGCAGA ATCCTGCTTT GGGGGTTTTG AATCCGGTGC TGGGTCTAGG TGTTGGTGCA 
    GGTGGGATGC TGAATCAGAC AGGGTTGAGT CCATTGTTTC CTGGTGGGGT TTCGCAGCCT 
    TTGAACAGAG TTGGGAATGT TGGTCCTTCT ATTGGATTGG GTGCAGGATT TACCACACAG 
    CATGGGATTA ATACTATAAG CAACAGTATG ATTGGTAGTT ATAATTCTCA GGCTGCTTTG 
    CAGGGATTGG GTGCTTATCA GAGTTCTCAA TTGAGTCAGC CTTCTGCATC AGCAGCAAGG 
    TCTCAGGCTG GCATTGGATC TGTGCCGAGT TATTTTGGGC GCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024445747.1
    CDS140..1564
    Translation

    Target ORF information:

    RefSeq Version XM_024589979.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa UBP1-associated protein 2A (LOC7467969), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024589979.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGTCAAGA AACGAAAGCC CACTTCCAAA CCCCAACAAC CATCCTCTTC TAAACAACCC 
    AAAATTGAAA AGCCCCCGCA GCCTCCACCA CCTTCCTCAG AAGCCGAAGA AGTAGCAGCA 
    GTGGTAGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGG AGGAGGAAGG AGACAGTTCC 
    TCGTCAGAAA CAGAGTCAGG GGATTCAGGA TCCGAAGAGG AGGAGGAATC TGAATCTGAA 
    TCCGAAGAAG AAGAAGAAGA AAGCGAAGAT TCTAAACGAG AAACCATAAG CAAAATCTTA 
    CAACCCTTCA CTAAAGAACT ACTTATCAAA ATCCTCAAAG AAGCAGCCTC CACTGACCCA 
    TGTATCGCCA CAGAAATCTT CAACTCCGTC GATTCTGACC CAGTCCACCG CAAAATCTTC 
    GTTCACGGAC TCGGTTGGGA TGCCCACAAC GAAACCCTTA TCTCAGTTTT CAAAAAATAC 
    GGTGAAATTG AGGAATGCAA GATTGTAACT GATAAGGCTA CAGGTCGCTC AAAAGGGTAT 
    GGTTTTCTTC TCTTTAAAAC GCGAATTGCT GCGCGGAAAG CGCTTAAAGA GCCACAAAAA 
    AAGGTGGGGA ATCGAACGGT TTCGTGTCAA TTGGCGTCTT TAGGAAAGGG GCAGAATCAG 
    AAACAGGACA ATAGCTCTGA TGTCAGTTTG AGGAAATTGT ACATAGGGAA TGTGGGTCCG 
    CAGATTAGTG TGGAGAATCT TAGAGAGTTT TTTGCTCAGT TTGGAGAAAT TGAAGATGGG 
    CCATCAGGTT TTGATAAGAG TACTATGAAG TTTAGGGGTT TTGCCTTTAT TGTTTATAAG 
    AGTTTAGAGG GGATTAGGAA GGCATTAGAA GAGCCTGTTA AGGTTTTTGA AGGTTTAAAG 
    TTGCAGTGTT CACTATCTAC TAAGAATAGC AGTGGTGGTG GTGGTAATGC TAATGTTGCG 
    GAGGCGTCCA GTGCTGGTGC TGGTAACAAT GCAGGAGTTG TGCAGGGAAA TTTGGGAATT 
    CAGGGTTTAT TGAACCAGGG AATGGTGGGG CAGAGTGTGA ATCCAACAGG TGCAGTTTTC 
    TTGGGGCAGA ATCCTGCTTT GGGGGTTTTG AATCCGGTGC TGGGTCTAGG TGTTGGTGCA 
    GGTGGGATGC TGAATCAGAC AGGGTTGAGT CCATTGTTTC CTGGTGGGGT TTCGCAGCCT 
    TTGAACAGAG TTGGGAATGT TGGTCCTTCT ATTGGATTGG GTGCAGGATT TACCACACAG 
    CATGGGATTA ATACTATAAG CAACAGTATG ATTGGTAGTT ATAATTCTCA GGCTGCTTTG 
    CAGGGATTGG GTGCTTATCA GAGTTCTCAA TTGAGTCAGC CTTCTGCATC AGCAGCAAGG 
    TCTCAGGCTG GCATTGGATC TGTGCCGAGT TATTTTGGGC GCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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