ORF » Species Summary » Populus trichocarpa » LOC7461640 cDNA ORF clone

LOC7461640 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7461640 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7461640 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa00352 XM_002298642.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s32770g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa422756 XM_002298642.3
Latest version!		 Populus trichocarpa serine hydroxymethyltransferase 4 (LOC7461640), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7461640 ( XM_002298642.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002298678.2 Populus trichocarpa hypothetical protein (POPTR_0001s32770g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa00352
    Clone ID Related Accession (Same CDS sequence) XM_002298642.2
    Accession Version XM_002298642.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1230bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298642.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCCAGGAA ACCGCTACTA CGGCGGGAAT GAATATATTG ATCAGATTGA AAATCTCTGC 
    AGATCTCGGG CTCTTGAAGC TTTTCATTTA GACCCCACAA AATGGGGTGT AAATGTTCAG 
    CCATATTCAG GTTCTCCTGC AAATTTTGCT GCTTATACAG CAGTTCTTCA GCCCCATGAC 
    AGAATCATGG GGTTGGATTT GCCTTCTGGA GGGCATTTGA CTCATGGGTA TTACACATCT 
    GGGGGCAAGA AGATTTCAGC TACCAGTATT TATTTTGAGA GTTTGCCTTA CAAGGTGAAT 
    TCGCAAAGTG GGTATATTGA TTATGATAAA TTGGAGGAGA AGGCTCTAGA TTTTAGGCCT 
    AAGCTTATTA TTTGTGGTGG AAGTGCTTAT CCGAGAGATT GGGATTATAA AAAGTTTAGA 
    TCTGTCGCTG ATAAGTGTGG TGCTCTTTTG CTTTGTGATA TGGCTCACAT CAGTGGCCTT 
    GTTGCTGCTC AGGAAGCTGC CAACCCCTTT GAGTACTGTG ACATAGTCAC CACCACTACC 
    CACAAAAGTT TGAGGGGTCC TAGGGCTGGT ATGATCTTCT ATCGCAAGGG CCCTAAACCA 
    CCAAAGAAGG GTCAGCCAGA GAATGCGGTT TATGACTTCG AAGACAAGAT CAACTTTGCT 
    GTTTTCCCAT CTCTTCAGGG CGGTCCCCAC AATCACCAGA TCGGTGCTCT GGCTGTTGCC 
    TTGAAACAGG TCCAAACCCC TGGGTTCAAG GCCTATGCCA AACAAGTCAA GGCAAATGCC 
    GTTGCCCTTG GAAACTACTT GATGGGCCAG GGATACAAGC TTGTTACTGA AGGAACTGAG 
    AACCACCTCG TTCTGTGGGA TCTTAGACCC CTTGGATTGA CAGGCAACAA GGTCGAAAAG 
    CTCTGTGACC TTGCAAACAT CACCGTCAAC AAAAATGCCG TGTTTGGTGA CAGCAGTGCT 
    TTGGCTCCGG GAGGAGTAAG AATTGGTACC CCCGCCATGA CTTCAAGAGG TTTGGTAGAG 
    AAGGATTTCG AACAGATTGG AGAGTTCCTC CACCGTGCTG TGACCATCAC GCTGAGCATC 
    CAAAAGGAAT ATGGAAAGCT CTTGAAGGAC TTCAACAAGG GTCTGGTGAA CAACAAGGAC 
    ATTGAGGCAC TCAAGGCTGA TGTTGAAAAG TTTTCTGGCT CCTTCGACAT GCCTGGGTTT 
    CAGATGTCTG AGATGAAGTA CAAGGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298678.2
    CDS247..1476
    Translation

    Target ORF information:

    RefSeq Version XM_002298642.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s32770g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298642.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCCAGGAA ACCGCTACTA CGGCGGGAAT GAATATATTG ATCAGATTGA AAATCTCTGC 
    AGATCTCGGG CTCTTGAAGC TTTTCATTTA GACCCCACAA AATGGGGTGT AAATGTTCAG 
    CCATATTCAG GTTCTCCTGC AAATTTTGCT GCTTATACAG CAGTTCTTCA GCCCCATGAC 
    AGAATCATGG GGTTGGATTT GCCTTCTGGA GGGCATTTGA CTCATGGGTA TTACACATCT 
    GGGGGCAAGA AGATTTCAGC TACCAGTATT TATTTTGAGA GTTTGCCTTA CAAGGTGAAT 
    TCGCAAAGTG GGTATATTGA TTATGATAAA TTGGAGGAGA AGGCTCTAGA TTTTAGGCCT 
    AAGCTTATTA TTTGTGGTGG AAGTGCTTAT CCGAGAGATT GGGATTATAA AAAGTTTAGA 
    TCTGTCGCTG ATAAGTGTGG TGCTCTTTTG CTTTGTGATA TGGCTCACAT CAGTGGCCTT 
    GTTGCTGCTC AGGAAGCTGC CAACCCCTTT GAGTACTGTG ACATAGTCAC CACCACTACC 
    CACAAAAGTT TGAGGGGTCC TAGGGCTGGT ATGATCTTCT ATCGCAAGGG CCCTAAACCA 
    CCAAAGAAGG GTCAGCCAGA GAATGCGGTT TATGACTTCG AAGACAAGAT CAACTTTGCT 
    GTTTTCCCAT CTCTTCAGGG CGGTCCCCAC AATCACCAGA TCGGTGCTCT GGCTGTTGCC 
    TTGAAACAGG TCCAAACCCC TGGGTTCAAG GCCTATGCCA AACAAGTCAA GGCAAATGCC 
    GTTGCCCTTG GAAACTACTT GATGGGCCAG GGATACAAGC TTGTTACTGA AGGAACTGAG 
    AACCACCTCG TTCTGTGGGA TCTTAGACCC CTTGGATTGA CAGGCAACAA GGTCGAAAAG 
    CTCTGTGACC TTGCAAACAT CACCGTCAAC AAAAATGCCG TGTTTGGTGA CAGCAGTGCT 
    TTGGCTCCGG GAGGAGTAAG AATTGGTACC CCCGCCATGA CTTCAAGAGG TTTGGTAGAG 
    AAGGATTTCG AACAGATTGG AGAGTTCCTC CACCGTGCTG TGACCATCAC GCTGAGCATC 
    CAAAAGGAAT ATGGAAAGCT CTTGAAGGAC TTCAACAAGG GTCTGGTGAA CAACAAGGAC 
    ATTGAGGCAC TCAAGGCTGA TGTTGAAAAG TTTTCTGGCT CCTTCGACAT GCCTGGGTTT 
    CAGATGTCTG AGATGAAGTA CAAGGATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7461640 ( XM_002298642.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002298678.3 Populus trichocarpa serine hydroxymethyltransferase 4 (LOC7461640), mRNA.
    Price & Availability↑
    CloneID OPa422756
    Clone ID Related Accession (Same CDS sequence) XM_002298642.3
    Accession Version XM_002298642.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1416bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product serine hydroxymethyltransferase 4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002298642.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGATCCAG TCACTGCATG GGGAAACACC TCCCTGGAAT CAGTGGACCC AGAAATCCAC 
    GACTTGATCG AGAAGGAAAA ACGCCGGCAA TGCAGAGGTA TCGAGCTCAT CGCTTCAGAA 
    AATTTCACAT CTTTCGCCGT TATAGAGGCC CTTGGCAGCG CTCTGACTAA TAAGTACTCA 
    GAGGGTATGC CAGGAAACCG CTACTACGGC GGGAATGAAT ATATTGATCA GATTGAAAAT 
    CTCTGCAGAT CTCGGGCTCT TGAAGCTTTT CATTTAGACC CCACAAAATG GGGTGTAAAT 
    GTTCAGCCAT ATTCAGGTTC TCCTGCAAAT TTTGCTGCTT ATACAGCAGT TCTTCAGCCC 
    CATGACAGAA TCATGGGGTT GGATTTGCCT TCTGGAGGGC ATTTGACTCA TGGGTATTAC 
    ACATCTGGGG GCAAGAAGAT TTCAGCTACC AGTATTTATT TTGAGAGTTT GCCTTACAAG 
    GTGAATTCGC AAAGTGGGTA TATTGATTAT GATAAATTGG AGGAGAAGGC TCTAGATTTT 
    AGGCCTAAGC TTATTATTTG TGGTGGAAGT GCTTATCCGA GAGATTGGGA TTATAAAAAG 
    TTTAGATCTG TCGCTGATAA GTGTGGTGCT CTTTTGCTTT GTGATATGGC TCACATCAGT 
    GGCCTTGTTG CTGCTCAGGA AGCTGCCAAC CCCTTTGAGT ACTGTGACAT AGTCACCACC 
    ACTACCCACA AAAGTTTGAG GGGTCCTAGG GCTGGTATGA TCTTCTATCG CAAGGGCCCT 
    AAACCACCAA AGAAGGGTCA GCCAGAGAAT GCGGTTTATG ACTTCGAAGA CAAGATCAAC 
    TTTGCTGTTT TCCCATCTCT TCAGGGCGGT CCCCACAATC ACCAGATCGG TGCTCTGGCT 
    GTTGCCTTGA AACAGGTCCA AACCCCTGGG TTCAAGGCCT ATGCCAAACA AGTCAAGGCA 
    AATGCCGTTG CCCTTGGAAA CTACTTGATG GGCCAGGGAT ACAAGCTTGT TACTGAAGGA 
    ACTGAGAACC ACCTCGTTCT GTGGGATCTT AGACCCCTTG GATTGACAGG CAACAAGGTC 
    GAAAAGCTCT GTGACCTTGC AAACATCACC GTCAACAAAA ATGCCGTGTT TGGTGACAGC 
    AGTGCTTTGG CTCCGGGAGG AGTAAGAATT GGTACCCCCG CCATGACTTC AAGAGGTTTG 
    GTAGAGAAGG ATTTCGAACA GATTGGAGAG TTCCTCCACC GTGCTGTGAC CATCACGCTG 
    AGCATCCAAA AGGAATATGG AAAGCTCTTG AAGGACTTCA ACAAGGGTCT GGTGAACAAC 
    AAGGACATTG AGGCACTCAA GGCTGATGTT GAAAAGTTTT CTGGCTCCTT CGACATGCCT 
    GGGTTTCAGA TGTCTGAGAT GAAGTACAAG GATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298678.3
    CDS90..1505
    Translation

    Target ORF information:

    RefSeq Version XM_002298642.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa serine hydroxymethyltransferase 4 (LOC7461640), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298642.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGATCCAG TCACTGCATG GGGAAACACC TCCCTGGAAT CAGTGGACCC AGAAATCCAC 
    GACTTGATCG AGAAGGAAAA ACGCCGGCAA TGCAGAGGTA TCGAGCTCAT CGCTTCAGAA 
    AATTTCACAT CTTTCGCCGT TATAGAGGCC CTTGGCAGCG CTCTGACTAA TAAGTACTCA 
    GAGGGTATGC CAGGAAACCG CTACTACGGC GGGAATGAAT ATATTGATCA GATTGAAAAT 
    CTCTGCAGAT CTCGGGCTCT TGAAGCTTTT CATTTAGACC CCACAAAATG GGGTGTAAAT 
    GTTCAGCCAT ATTCAGGTTC TCCTGCAAAT TTTGCTGCTT ATACAGCAGT TCTTCAGCCC 
    CATGACAGAA TCATGGGGTT GGATTTGCCT TCTGGAGGGC ATTTGACTCA TGGGTATTAC 
    ACATCTGGGG GCAAGAAGAT TTCAGCTACC AGTATTTATT TTGAGAGTTT GCCTTACAAG 
    GTGAATTCGC AAAGTGGGTA TATTGATTAT GATAAATTGG AGGAGAAGGC TCTAGATTTT 
    AGGCCTAAGC TTATTATTTG TGGTGGAAGT GCTTATCCGA GAGATTGGGA TTATAAAAAG 
    TTTAGATCTG TCGCTGATAA GTGTGGTGCT CTTTTGCTTT GTGATATGGC TCACATCAGT 
    GGCCTTGTTG CTGCTCAGGA AGCTGCCAAC CCCTTTGAGT ACTGTGACAT AGTCACCACC 
    ACTACCCACA AAAGTTTGAG GGGTCCTAGG GCTGGTATGA TCTTCTATCG CAAGGGCCCT 
    AAACCACCAA AGAAGGGTCA GCCAGAGAAT GCGGTTTATG ACTTCGAAGA CAAGATCAAC 
    TTTGCTGTTT TCCCATCTCT TCAGGGCGGT CCCCACAATC ACCAGATCGG TGCTCTGGCT 
    GTTGCCTTGA AACAGGTCCA AACCCCTGGG TTCAAGGCCT ATGCCAAACA AGTCAAGGCA 
    AATGCCGTTG CCCTTGGAAA CTACTTGATG GGCCAGGGAT ACAAGCTTGT TACTGAAGGA 
    ACTGAGAACC ACCTCGTTCT GTGGGATCTT AGACCCCTTG GATTGACAGG CAACAAGGTC 
    GAAAAGCTCT GTGACCTTGC AAACATCACC GTCAACAAAA ATGCCGTGTT TGGTGACAGC 
    AGTGCTTTGG CTCCGGGAGG AGTAAGAATT GGTACCCCCG CCATGACTTC AAGAGGTTTG 
    GTAGAGAAGG ATTTCGAACA GATTGGAGAG TTCCTCCACC GTGCTGTGAC CATCACGCTG 
    AGCATCCAAA AGGAATATGG AAAGCTCTTG AAGGACTTCA ACAAGGGTCT GGTGAACAAC 
    AAGGACATTG AGGCACTCAA GGCTGATGTT GAAAAGTTTT CTGGCTCCTT CGACATGCCT 
    GGGTTTCAGA TGTCTGAGAT GAAGTACAAG GATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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