ORF » Species Summary » Populus trichocarpa » LOC18100511 cDNA ORF clone

LOC18100511 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18100511 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18100511 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa16626 XM_006381756.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0006s18510g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa432236 XM_024604043.1
Latest version!		 Populus trichocarpa 4-coumarate--CoA ligase 2 (LOC18100511), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18100511 ( XM_006381756.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006381818.1 Populus trichocarpa hypothetical protein (POPTR_0006s18510g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa16626
    Clone ID Related Accession (Same CDS sequence) XM_006381756.1
    Accession Version XM_006381756.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1254bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGGCGG AAAATGATCA AGCACAAGAA TTCATTTTCA GGTCCAAACT CCCTGATATC 
    CACATCCCAA ACCACCTCCC TTTACACACT TATTGCTTTG AAAACCTTTC CCGATTCAAA 
    GACAGTCCCT GTTTGATCAA TGGCCCTACC GGTGAAATCC ACACCTACGC GGATGTTGAG 
    CTCACATCAC GCAAAGTCGC TTCCGGCCTC AACAAGTTAG GCATCAAACA AGGCGATGTT 
    ATATTGCTGT TGCTCCAAAA CTCGCCAGAA TTTGTGTTTG CGTTTCTCGG AGCATCAATT 
    ATTGGTGCTA TTAGCACAAC CGCAAACCCC TTCTACACTC CCGCTGAGGT CGCAAAGCAA 
    GCAACAGCAT CAAAGGCAAA GCTGATAATA ACACAGGCAG TTTACGCCGA GAAAGTGCAA 
    CAATTCGTCA AGGAAAATGA TCATGTCAAA ATAGTGACCG TTGACTCTCC ACCAGAAAAC 
    TACTTGCATT TTTCAGAGTT GACAAATTCT GATGAGGATG ATATTCCTGC TGTCGAGATT 
    AACCCTGATG ATGTCGTGGC ACTCCCTTAT TCGTCAGGGA CAACAGGTCT CCCTAAAGGT 
    GTCATGTTAA CTCATAAAGG GCTCGTTACT AGTGTGGCAC AACAAGTAGA TGGAGAGAAC 
    CCTAACCTCT ATTTTCACGA GAAGGATGTG ATTCTTTGTG TGTTGCCTTT GTTCCACATC 
    TACTCGCTCA ATTCCGTGTT ACTTTGTGGG CTAAGAGTTG GTTCAGCAAT TTTGCTTATG 
    CAAAAATTCG AGATTGTTAC GTTAATGGAG CTTGTACAAA AATATAAGGT GACAATTGCG 
    CCATTTGTCC CCCCTGTCGT CCTCGCAGTT GCAAAATGTC CAGTCGTTGA TAAGTATGAT 
    CTTTCTTCCA TTCGGACCGT AATGTCTGGC GCCGCACCAA TGGGGAAGGA GCTAGAGGAT 
    ACAGTAAGGG CTAAGCTGCC TAACGCTAAA CTTGGACAGG GATACGGAAT GACAGAGGCA 
    GGACCCGTGC TATCGATGTG CTTGGCATTT GCAAAGGAAC CGTTTGAAAT TAAATCAGGT 
    GCCTGTGGGA CTGTTGTTAG AAACGCCGAG ATGAAGATTG TTGACCCCGA TACCGGTAGA 
    TCCCTGCCAC GAAATCAAGC CGGAGAGATT TGCATTAGAG GCAGCCAAAT CATGAAAGGT 
    ACACGTTTCT ACCAACTATC TCAAAGGGTT CTTGCTAGTT GTTGCATGTC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381818.1
    CDS181..1434
    Translation

    Target ORF information:

    RefSeq Version XM_006381756.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s18510g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006381756.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGGCGG AAAATGATCA AGCACAAGAA TTCATTTTCA GGTCCAAACT CCCTGATATC 
    CACATCCCAA ACCACCTCCC TTTACACACT TATTGCTTTG AAAACCTTTC CCGATTCAAA 
    GACAGTCCCT GTTTGATCAA TGGCCCTACC GGTGAAATCC ACACCTACGC GGATGTTGAG 
    CTCACATCAC GCAAAGTCGC TTCCGGCCTC AACAAGTTAG GCATCAAACA AGGCGATGTT 
    ATATTGCTGT TGCTCCAAAA CTCGCCAGAA TTTGTGTTTG CGTTTCTCGG AGCATCAATT 
    ATTGGTGCTA TTAGCACAAC CGCAAACCCC TTCTACACTC CCGCTGAGGT CGCAAAGCAA 
    GCAACAGCAT CAAAGGCAAA GCTGATAATA ACACAGGCAG TTTACGCCGA GAAAGTGCAA 
    CAATTCGTCA AGGAAAATGA TCATGTCAAA ATAGTGACCG TTGACTCTCC ACCAGAAAAC 
    TACTTGCATT TTTCAGAGTT GACAAATTCT GATGAGGATG ATATTCCTGC TGTCGAGATT 
    AACCCTGATG ATGTCGTGGC ACTCCCTTAT TCGTCAGGGA CAACAGGTCT CCCTAAAGGT 
    GTCATGTTAA CTCATAAAGG GCTCGTTACT AGTGTGGCAC AACAAGTAGA TGGAGAGAAC 
    CCTAACCTCT ATTTTCACGA GAAGGATGTG ATTCTTTGTG TGTTGCCTTT GTTCCACATC 
    TACTCGCTCA ATTCCGTGTT ACTTTGTGGG CTAAGAGTTG GTTCAGCAAT TTTGCTTATG 
    CAAAAATTCG AGATTGTTAC GTTAATGGAG CTTGTACAAA AATATAAGGT GACAATTGCG 
    CCATTTGTCC CCCCTGTCGT CCTCGCAGTT GCAAAATGTC CAGTCGTTGA TAAGTATGAT 
    CTTTCTTCCA TTCGGACCGT AATGTCTGGC GCCGCACCAA TGGGGAAGGA GCTAGAGGAT 
    ACAGTAAGGG CTAAGCTGCC TAACGCTAAA CTTGGACAGG GATACGGAAT GACAGAGGCA 
    GGACCCGTGC TATCGATGTG CTTGGCATTT GCAAAGGAAC CGTTTGAAAT TAAATCAGGT 
    GCCTGTGGGA CTGTTGTTAG AAACGCCGAG ATGAAGATTG TTGACCCCGA TACCGGTAGA 
    TCCCTGCCAC GAAATCAAGC CGGAGAGATT TGCATTAGAG GCAGCCAAAT CATGAAAGGT 
    ACACGTTTCT ACCAACTATC TCAAAGGGTT CTTGCTAGTT GTTGCATGTC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18100511 ( XM_024604043.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024459811.1 Populus trichocarpa 4-coumarate--CoA ligase 2 (LOC18100511), mRNA.
    Price & Availability↑
    CloneID OPa432236
    Clone ID Related Accession (Same CDS sequence) XM_024604043.1
    Accession Version XM_024604043.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1638bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 4-coumarate--CoA ligase 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGAGGCGG AAAATGATCA AGCACAAGAA TTCATTTTCA GGTCCAAACT CCCTGATATC 
    CACATCCCAA ACCACCTCCC TTTACACACT TATTGCTTTG AAAACCTTTC CCGATTCAAA 
    GACAGTCCCT GTTTGATCAA TGGCCCTACC GGTGAAATCC ACACCTACGC GGATGTTGAG 
    CTCACATCAC GCAAAGTCGC TTCCGGCCTC AACAAGTTAG GCATCAAACA AGGCGATGTT 
    ATATTGCTGT TGCTCCAAAA CTCGCCAGAA TTTGTGTTTG CGTTTCTCGG AGCATCAATT 
    ATTGGTGCTA TTAGCACAAC CGCAAACCCC TTCTACACTC CCGCTGAGGT CGCAAAGCAA 
    GCAACAGCAT CAAAGGCAAA GCTGATAATA ACACAGGCAG TTTACGCCGA GAAAGTGCAA 
    CAATTCGTCA AGGAAAATGA TCATGTCAAA ATAGTGACCG TTGACTCTCC ACCAGAAAAC 
    TACTTGCATT TTTCAGAGTT GACAAATTCT GATGAGGATG ATATTCCTGC TGTCGAGATT 
    AACCCTGATG ATGTCGTGGC ACTCCCTTAT TCGTCAGGGA CAACAGGTCT CCCTAAAGGT 
    GTCATGTTAA CTCATAAAGG GCTCGTTACT AGTGTGGCAC AACAAGTAGA TGGAGAGAAC 
    CCTAACCTCT ATTTTCACGA GAAGGATGTG ATTCTTTGTG TGTTGCCTTT GTTCCACATC 
    TACTCGCTCA ATTCCGTGTT ACTTTGTGGG CTAAGAGTTG GTTCAGCAAT TTTGCTTATG 
    CAAAAATTCG AGATTGTTAC GTTAATGGAG CTTGTACAAA AATATAAGGT GACAATTGCG 
    CCATTTGTCC CCCCTGTCGT CCTCGCAGTT GCAAAATGTC CAGTCGTTGA TAAGTATGAT 
    CTTTCTTCCA TTCGGACCGT AATGTCTGGC GCCGCACCAA TGGGGAAGGA GCTAGAGGAT 
    ACAGTAAGGG CTAAGCTGCC TAACGCTAAA CTTGGACAGG GATACGGAAT GACAGAGGCA 
    GGGCCCGTGC TATCGATGTG CTTGGCATTT GCAAAGGAAC CGTTTGAAAT TAAATCAGGT 
    GCCTGTGGGA CTGTTGTTAG AAACGCCGAG ATGAAGATTG TTGACCCCGA TACCGGTAGA 
    TCCCTGCCAC GAAATCAAGC CGGAGAGATT TGCATTAGAG GCAGCCAAAT CATGAAAGGT 
    TATCTAAATG ACCCTGAGGC CACTGAAAGG ACTGTAGACA ATGATGGATG GTTGCACACC 
    GGCGACATTG GATACATCGA CGGAGATGAT GAGCTCTTTA TCGTTGATCG ATTGAAAGAA 
    TTGATTAAAT ACAAGGGTTT TCAAGTAGCA CCTGCTGAGC TTGAAGCAAT GTTGATTGCT 
    CATCCCGACA TCTCTGATTG TGCTGTAGTA CCCATGAAAG ATGAAGCTGC CGGAGAGGTT 
    CCTATTGCTT TTGTGGTGCG AGCAAATGGT TCCAAGATCA CCGAGGACGA AATCAAACAA 
    TATATCTCAA AACAGGTGGT CTTTTACAAG AGAATTAGTC GGGTGTTCTT CACGGAAGCG 
    ATTCCCAAGG CTCCATCCGG AAAAATCTTG AGAAAAGACC TAAGAGCAAG GCTTGCAACT 
    GGCGATCTTC CTCATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024459811.1
    CDS256..1893
    Translation

    Target ORF information:

    RefSeq Version XM_024604043.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 4-coumarate--CoA ligase 2 (LOC18100511), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024604043.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGAGGCGG AAAATGATCA AGCACAAGAA TTCATTTTCA GGTCCAAACT CCCTGATATC 
    CACATCCCAA ACCACCTCCC TTTACACACT TATTGCTTTG AAAACCTTTC CCGATTCAAA 
    GACAGTCCCT GTTTGATCAA TGGCCCTACC GGTGAAATCC ACACCTACGC GGATGTTGAG 
    CTCACATCAC GCAAAGTCGC TTCCGGCCTC AACAAGTTAG GCATCAAACA AGGCGATGTT 
    ATATTGCTGT TGCTCCAAAA CTCGCCAGAA TTTGTGTTTG CGTTTCTCGG AGCATCAATT 
    ATTGGTGCTA TTAGCACAAC CGCAAACCCC TTCTACACTC CCGCTGAGGT CGCAAAGCAA 
    GCAACAGCAT CAAAGGCAAA GCTGATAATA ACACAGGCAG TTTACGCCGA GAAAGTGCAA 
    CAATTCGTCA AGGAAAATGA TCATGTCAAA ATAGTGACCG TTGACTCTCC ACCAGAAAAC 
    TACTTGCATT TTTCAGAGTT GACAAATTCT GATGAGGATG ATATTCCTGC TGTCGAGATT 
    AACCCTGATG ATGTCGTGGC ACTCCCTTAT TCGTCAGGGA CAACAGGTCT CCCTAAAGGT 
    GTCATGTTAA CTCATAAAGG GCTCGTTACT AGTGTGGCAC AACAAGTAGA TGGAGAGAAC 
    CCTAACCTCT ATTTTCACGA GAAGGATGTG ATTCTTTGTG TGTTGCCTTT GTTCCACATC 
    TACTCGCTCA ATTCCGTGTT ACTTTGTGGG CTAAGAGTTG GTTCAGCAAT TTTGCTTATG 
    CAAAAATTCG AGATTGTTAC GTTAATGGAG CTTGTACAAA AATATAAGGT GACAATTGCG 
    CCATTTGTCC CCCCTGTCGT CCTCGCAGTT GCAAAATGTC CAGTCGTTGA TAAGTATGAT 
    CTTTCTTCCA TTCGGACCGT AATGTCTGGC GCCGCACCAA TGGGGAAGGA GCTAGAGGAT 
    ACAGTAAGGG CTAAGCTGCC TAACGCTAAA CTTGGACAGG GATACGGAAT GACAGAGGCA 
    GGGCCCGTGC TATCGATGTG CTTGGCATTT GCAAAGGAAC CGTTTGAAAT TAAATCAGGT 
    GCCTGTGGGA CTGTTGTTAG AAACGCCGAG ATGAAGATTG TTGACCCCGA TACCGGTAGA 
    TCCCTGCCAC GAAATCAAGC CGGAGAGATT TGCATTAGAG GCAGCCAAAT CATGAAAGGT 
    TATCTAAATG ACCCTGAGGC CACTGAAAGG ACTGTAGACA ATGATGGATG GTTGCACACC 
    GGCGACATTG GATACATCGA CGGAGATGAT GAGCTCTTTA TCGTTGATCG ATTGAAAGAA 
    TTGATTAAAT ACAAGGGTTT TCAAGTAGCA CCTGCTGAGC TTGAAGCAAT GTTGATTGCT 
    CATCCCGACA TCTCTGATTG TGCTGTAGTA CCCATGAAAG ATGAAGCTGC CGGAGAGGTT 
    CCTATTGCTT TTGTGGTGCG AGCAAATGGT TCCAAGATCA CCGAGGACGA AATCAAACAA 
    TATATCTCAA AACAGGTGGT CTTTTACAAG AGAATTAGTC GGGTGTTCTT CACGGAAGCG 
    ATTCCCAAGG CTCCATCCGG AAAAATCTTG AGAAAAGACC TAAGAGCAAG GCTTGCAACT 
    GGCGATCTTC CTCATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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