ORF » Species Summary » Populus trichocarpa » LOC18096961 cDNA ORF clone

LOC18096961 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18096961 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18096961 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa09029 XM_006385579.2
Latest version!		 Populus trichocarpa AP-2 complex subunit mu (LOC18096961), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa09029 XM_006385579.1 Populus trichocarpa AP47/50p mRNA family protein (POPTR_0003s08940g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18096961 ( XM_006385579.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006385641.1 Populus trichocarpa AP47/50p mRNA family protein (POPTR_0003s08940g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa09029
    Clone ID Related Accession (Same CDS sequence) XM_006385579.1 , XM_006385579.2
    Accession Version XM_006385579.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1317bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product AP47/50p mRNA family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCCGGTGG CTGCTTCCGC CGTCTACTTC TTGAATCTTC GCGGCGATGT CCTCATCAAT 
    CGCCTCTATC GTGACGATGT CGGTGGAAAT ATGGTGGATG CCTTCCGGAC ACATATAATG 
    CAAACGAAAG AACTGGGAAC ATGTCCAGTG CGGCAGATTG GAGGTTGCTC TTTCTTTTAC 
    ATGAGAATTA GCAATGTCTA CATTGTGATT GTTGTCAGCA GCAATGCTAA TGTAGCTTGT 
    GCATTCAAGT TTGTTGTTGA GGCTGTTGCA TTGTTCAAAT CATACTTTGG TGGGGCTTTT 
    GATGAAGATG CCATCAGAAA TAATTTTGTT CTGATTTATG AGCTGCTAGA TGAGATCATG 
    GACTTTGGTT ACCCACAAAA TCTTTCTCCT GAGATTTTAA AGCTTTACAT CACACAAGAA 
    GGAGTCCGCT CACCGTTTTC GTCCAAGCCT ACAGATAAAC CTGTCCCCAA TGCAACTTTA 
    CAAGTTACAG GTGCTGTCGG TTGGCGCAGA GAAGGCCTTG TTTATAAAAA GAATGAGGTT 
    TTTTTGGATA TTGTGGAGAG TGTTAACCTT CTTATGTCTT CAAAAGGTAA CGTCCTGCGC 
    TGTGATGTAA CTGGGAAGGT TCTTATGAAG TGCTTCCTCT CTGGAATGCC TGATTTGAAG 
    TTGGGTTTAA ATGATAAAAT TGGTCTTGAG AAAGAGTCAC AACTGAAATC TCGTCCTGCT 
    AAAAGTGGCA AAACAATTGA GCTTGATGAT GTTACTTTCC ATCAATGTGT AAATTTGACG 
    AGGTTTAACT CAGAGAAGAC TGTAAGTTTT GTCCCTCCAG ATGGTGAATT TGAATTGATG 
    AAGTATCGTA TCACTGAAGG GGTTAATCTT CCATTTCGGG TATTGCCAAC AATCAAGGAA 
    CTTGGTCGAA CACGCATGGA AGTGAATGTC AAGGTTAAGA GTGTCTTTGG TGCAAAAATG 
    TTTGCACTGG GGGTTGTCAT CAAAATTCCT GTTCCAAAAC AAACTGCTAA AACCAGTTTC 
    CAAGTTACAT CTGGTCGAGC AAAGTACAAT GCTGCAATTG ATTGCATAGT TTGGAAGATA 
    AGAAAATTTC CTGGACAAAC CGAGCCAACC ATGAGCGCAG AAGTCGAGCT GATTTCTACC 
    ATGGCAGAAA AGAAGTCTTG GACGAGGCCT CCGATTCAGA TGGAGTTCCA GGTTCCGATG 
    TTTACAGCAT CTGGTTTACG CGTTCGTTTT CTGAAGGTAT GGGAGAAAAG TGGGTACAAC 
    ACAGTTGAAT GGGTTCGTTA TATTACCAAA GCAGGCTCGT ATGAGATTAG GTGCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006385641.1
    CDS199..1515
    Translation

    Target ORF information:

    RefSeq Version XM_006385579.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa AP47/50p mRNA family protein (POPTR_0003s08940g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006385579.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCCGGTGG CTGCTTCCGC CGTCTACTTC TTGAATCTTC GCGGCGATGT CCTCATCAAT 
    CGCCTCTATC GTGACGATGT CGGTGGAAAT ATGGTGGATG CCTTCCGGAC ACATATAATG 
    CAAACGAAAG AACTGGGAAC ATGTCCAGTG CGGCAGATTG GAGGTTGCTC TTTCTTTTAC 
    ATGAGAATTA GCAATGTCTA CATTGTGATT GTTGTCAGCA GCAATGCTAA TGTAGCTTGT 
    GCATTCAAGT TTGTTGTTGA GGCTGTTGCA TTGTTCAAAT CATACTTTGG TGGGGCTTTT 
    GATGAAGATG CCATCAGAAA TAATTTTGTT CTGATTTATG AGCTGCTAGA TGAGATCATG 
    GACTTTGGTT ACCCACAAAA TCTTTCTCCT GAGATTTTAA AGCTTTACAT CACACAAGAA 
    GGAGTCCGCT CACCGTTTTC GTCCAAGCCT ACAGATAAAC CTGTCCCCAA TGCAACTTTA 
    CAAGTTACAG GTGCTGTCGG TTGGCGCAGA GAAGGCCTTG TTTATAAAAA GAATGAGGTT 
    TTTTTGGATA TTGTGGAGAG TGTTAACCTT CTTATGTCTT CAAAAGGTAA CGTCCTGCGC 
    TGTGATGTAA CTGGGAAGGT TCTTATGAAG TGCTTCCTCT CTGGAATGCC TGATTTGAAG 
    TTGGGTTTAA ATGATAAAAT TGGTCTTGAG AAAGAGTCAC AACTGAAATC TCGTCCTGCT 
    AAAAGTGGCA AAACAATTGA GCTTGATGAT GTTACTTTCC ATCAATGTGT AAATTTGACG 
    AGGTTTAACT CAGAGAAGAC TGTAAGTTTT GTCCCTCCAG ATGGTGAATT TGAATTGATG 
    AAGTATCGTA TCACTGAAGG GGTTAATCTT CCATTTCGGG TATTGCCAAC AATCAAGGAA 
    CTTGGTCGAA CACGCATGGA AGTGAATGTC AAGGTTAAGA GTGTCTTTGG TGCAAAAATG 
    TTTGCACTGG GGGTTGTCAT CAAAATTCCT GTTCCAAAAC AAACTGCTAA AACCAGTTTC 
    CAAGTTACAT CTGGTCGAGC AAAGTACAAT GCTGCAATTG ATTGCATAGT TTGGAAGATA 
    AGAAAATTTC CTGGACAAAC CGAGCCAACC ATGAGCGCAG AAGTCGAGCT GATTTCTACC 
    ATGGCAGAAA AGAAGTCTTG GACGAGGCCT CCGATTCAGA TGGAGTTCCA GGTTCCGATG 
    TTTACAGCAT CTGGTTTACG CGTTCGTTTT CTGAAGGTAT GGGAGAAAAG TGGGTACAAC 
    ACAGTTGAAT GGGTTCGTTA TATTACCAAA GCAGGCTCGT ATGAGATTAG GTGCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18096961 ( XM_006385579.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006385641.1 Populus trichocarpa AP-2 complex subunit mu (LOC18096961), mRNA.
    Price & Availability↑
    CloneID OPa09029
    Clone ID Related Accession (Same CDS sequence) XM_006385579.1 , XM_006385579.2
    Accession Version XM_006385579.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1317bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product AP-2 complex subunit mu
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006385579.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCCGGTGG CTGCTTCCGC CGTCTACTTC TTGAATCTTC GCGGCGATGT CCTCATCAAT 
    CGCCTCTATC GTGACGATGT CGGTGGAAAT ATGGTGGATG CCTTCCGGAC ACATATAATG 
    CAAACGAAAG AACTGGGAAC ATGTCCAGTG CGGCAGATTG GAGGTTGCTC TTTCTTTTAC 
    ATGAGAATTA GCAATGTCTA CATTGTGATT GTTGTCAGCA GCAATGCTAA TGTAGCTTGT 
    GCATTCAAGT TTGTTGTTGA GGCTGTTGCA TTGTTCAAAT CATACTTTGG TGGGGCTTTT 
    GATGAAGATG CCATCAGAAA TAATTTTGTT CTGATTTATG AGCTGCTAGA TGAGATCATG 
    GACTTTGGTT ACCCACAAAA TCTTTCTCCT GAGATTTTAA AGCTTTACAT CACACAAGAA 
    GGAGTCCGCT CACCGTTTTC GTCCAAGCCT ACAGATAAAC CTGTCCCCAA TGCAACTTTA 
    CAAGTTACAG GTGCTGTCGG TTGGCGCAGA GAAGGCCTTG TTTATAAAAA GAATGAGGTT 
    TTTTTGGATA TTGTGGAGAG TGTTAACCTT CTTATGTCTT CAAAAGGTAA CGTCCTGCGC 
    TGTGATGTAA CTGGGAAGGT TCTTATGAAG TGCTTCCTCT CTGGAATGCC TGATTTGAAG 
    TTGGGTTTAA ATGATAAAAT TGGTCTTGAG AAAGAGTCAC AACTGAAATC TCGTCCTGCT 
    AAAAGTGGCA AAACAATTGA GCTTGATGAT GTTACTTTCC ATCAATGTGT AAATTTGACG 
    AGGTTTAACT CAGAGAAGAC TGTAAGTTTT GTCCCTCCAG ATGGTGAATT TGAATTGATG 
    AAGTATCGTA TCACTGAAGG GGTTAATCTT CCATTTCGGG TATTGCCAAC AATCAAGGAA 
    CTTGGTCGAA CACGCATGGA AGTGAATGTC AAGGTTAAGA GTGTCTTTGG TGCAAAAATG 
    TTTGCACTGG GGGTTGTCAT CAAAATTCCT GTTCCAAAAC AAACTGCTAA AACCAGTTTC 
    CAAGTTACAT CTGGTCGAGC AAAGTACAAT GCTGCAATTG ATTGCATAGT TTGGAAGATA 
    AGAAAATTTC CTGGACAAAC CGAGCCAACC ATGAGCGCAG AAGTCGAGCT GATTTCTACC 
    ATGGCAGAAA AGAAGTCTTG GACGAGGCCT CCGATTCAGA TGGAGTTCCA GGTTCCGATG 
    TTTACAGCAT CTGGTTTACG CGTTCGTTTT CTGAAGGTAT GGGAGAAAAG TGGGTACAAC 
    ACAGTTGAAT GGGTTCGTTA TATTACCAAA GCAGGCTCGT ATGAGATTAG GTGCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006385641.1
    CDS233..1549
    Translation

    Target ORF information:

    RefSeq Version XM_006385579.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa AP-2 complex subunit mu (LOC18096961), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006385579.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCCGGTGG CTGCTTCCGC CGTCTACTTC TTGAATCTTC GCGGCGATGT CCTCATCAAT 
    CGCCTCTATC GTGACGATGT CGGTGGAAAT ATGGTGGATG CCTTCCGGAC ACATATAATG 
    CAAACGAAAG AACTGGGAAC ATGTCCAGTG CGGCAGATTG GAGGTTGCTC TTTCTTTTAC 
    ATGAGAATTA GCAATGTCTA CATTGTGATT GTTGTCAGCA GCAATGCTAA TGTAGCTTGT 
    GCATTCAAGT TTGTTGTTGA GGCTGTTGCA TTGTTCAAAT CATACTTTGG TGGGGCTTTT 
    GATGAAGATG CCATCAGAAA TAATTTTGTT CTGATTTATG AGCTGCTAGA TGAGATCATG 
    GACTTTGGTT ACCCACAAAA TCTTTCTCCT GAGATTTTAA AGCTTTACAT CACACAAGAA 
    GGAGTCCGCT CACCGTTTTC GTCCAAGCCT ACAGATAAAC CTGTCCCCAA TGCAACTTTA 
    CAAGTTACAG GTGCTGTCGG TTGGCGCAGA GAAGGCCTTG TTTATAAAAA GAATGAGGTT 
    TTTTTGGATA TTGTGGAGAG TGTTAACCTT CTTATGTCTT CAAAAGGTAA CGTCCTGCGC 
    TGTGATGTAA CTGGGAAGGT TCTTATGAAG TGCTTCCTCT CTGGAATGCC TGATTTGAAG 
    TTGGGTTTAA ATGATAAAAT TGGTCTTGAG AAAGAGTCAC AACTGAAATC TCGTCCTGCT 
    AAAAGTGGCA AAACAATTGA GCTTGATGAT GTTACTTTCC ATCAATGTGT AAATTTGACG 
    AGGTTTAACT CAGAGAAGAC TGTAAGTTTT GTCCCTCCAG ATGGTGAATT TGAATTGATG 
    AAGTATCGTA TCACTGAAGG GGTTAATCTT CCATTTCGGG TATTGCCAAC AATCAAGGAA 
    CTTGGTCGAA CACGCATGGA AGTGAATGTC AAGGTTAAGA GTGTCTTTGG TGCAAAAATG 
    TTTGCACTGG GGGTTGTCAT CAAAATTCCT GTTCCAAAAC AAACTGCTAA AACCAGTTTC 
    CAAGTTACAT CTGGTCGAGC AAAGTACAAT GCTGCAATTG ATTGCATAGT TTGGAAGATA 
    AGAAAATTTC CTGGACAAAC CGAGCCAACC ATGAGCGCAG AAGTCGAGCT GATTTCTACC 
    ATGGCAGAAA AGAAGTCTTG GACGAGGCCT CCGATTCAGA TGGAGTTCCA GGTTCCGATG 
    TTTACAGCAT CTGGTTTACG CGTTCGTTTT CTGAAGGTAT GGGAGAAAAG TGGGTACAAC 
    ACAGTTGAAT GGGTTCGTTA TATTACCAAA GCAGGCTCGT ATGAGATTAG GTGCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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