PB000837.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000837.02.0
Entrez Gene ID	3428306
Full Name	DNA-directed RNA polymerase, alpha subunit, putative
Synonyms	PB000837.02.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_022857831.1	XP_022713710.1	DNA-directed RNA polymerase, alpha subunit, putative
XM_674596.1	XP_679688.1	DNA-directed RNA polymerase, alpha subunit, truncated

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000837.02.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000837.02.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07080	XM_022857831.1 Latest version!	Plasmodium berghei ANKA DNA-directed RNA polymerase, alpha subunit, putative (PBANKA_133590), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000837.02.0 ( XM_022857831.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022713710.1 Plasmodium berghei ANKA DNA-directed RNA polymerase, alpha subunit, putative (PBANKA_133590), partial mRNA.

Price & Availability↑

CloneID	OPm07080
Clone ID Related Accession (Same CDS sequence)	XM_022857831.1
Accession Version	XM_022857831.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2418bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	DNA-directed RNA polymerase, alpha subunit, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036171). COMPLETENESS: incomplete on both ends.

ATGCGACTCA TTACTATTTC AGTATGGGTA TTAACAATAC TTTTTACATA TAATAAATGT 
TTAAAAGTTA AAAAGTTATT TTATATCCCA AGCAATAAAG AAAATATATT TTTTGAAAAT 
GGATTAAATA AAAAAAAGCA AAATTGTTCA GAAAAACCAT TTTATACAAT CAGAAAATAT 
CACGCCTCAA AAAATGGCGC AAAACATATC CTAGGAAACA ATAAGGATAA CAACAATAAT 
AATACTAATC CTGACATAAA TGAGGAATAT AAAGTATTTC AAAAAACAAA TTTCATAAAA 
AAGTACCAAA TAACAAAAGA AGAAATTGAC ACTTATATTG AGCAAATAAA AAACAGCAAA 
GCAAGTGGTT ATGAACCTAA ATTTCCAAAA GATGCATTTA GAACACCAGA TGGATTAACA 
AATGTTATTT TGGATTATAA ATATAAAAAT GATAATTTAA AAATACACAA TTATTATTAT 
TTTTTTATGC AATTTTTAAA AAAACTATCA GAAAATAATG ATAACCAAAA TCCTAATATT 
AAACAACCAA AAAATGACAA TAGCCTAATA AATATACACG ATTTTTTATA CTTAAAAAAA 
AAAGGGTTTT TTGAAGGAGA ATTATATACC TGGAAAAATT GGATCATACT TAATAGAGGG 
GAATGGAAAG ATGAAATAGG ATATGATAAT AATGAAAATG AAGAATATGA AATAAAAACA 
ATAAGACCAA TTGTGGAACC CAAAATGAAA AGAATGCCAA TAGAGTATTG GGGAAGTTTT 
AGAGCAATTG ATTTTAATGT AAATCATTAT CCTATATATA AAAAATTATT CGATTATTTT 
AATAAAATAA ATGTAACTGA GGATGAACCA TATCACAAAA TTCATCCTTT TCTTTTTTAT 
CCTCGATTTA GTGTGGGTCG AGATAGAGGA GGTTTGAGTT ATGGTGATGC AAATTATTTT 
GGAAATTATG GAGATATTTA TAAAAAAAAT GAAGAAAGAA AAAAAAGATT AAAAATGTTG 
AAAGAAAATA ATAATAATGG AGATGCAAGC ATAGATTTCG ATTTTGGTCA AAATGATAAT 
TATGAAAATG AAGATTCAAA AAATAATGAG GATAAAGAAA GTGTTATAAA TTCGAATATA 
CATAAAGAGC ATTTTATTGA CAAATATGAT TTTGGCCCCA ATGATATTAA AATTGAAGAA 
GCAACAGACG TATTAATATA TCCACAAAAT GGAAGATTAT ATCAAAAATT TTATATAGGT 
CCATTAAATA TAACAGATGG ACACACATTT GGTTCATTAA TTAAATATGT ATGTCAAAGT 
CAAATATATG GTTATGCTAT AGTAGGTATA AAAATACATA ATATGAATGA AGATACAAAA 
ATTGAAAACA CACAAGAAGA TTTACTTGAA ATTGCTTTAA ATTTATCTGA TGTTTGCATA 
TATAGTAAAG AAATAAATAT AGAAACAAAT ATTCGTTTAA TTTTTAAAGG ACCTTTAATG 
TTAGTTGCTG GAATGATCCC ATTACCATCT CATTTAAAAG TTGTAAATAA AGAACAATAT 
ATATGTACAA TAAAAGAAAA TGGATACATT GATATTTCTA TTAAAATTGA ATATGGTAAA 
GGACATTGGA TAACATATGA TAAAGGTTTA TATAAAAGAG AAATAGGATC AGATAATGAA 
TGTATGAAAA AAAGACAAAT AAAAGAAGTT GTAAATAACA ATTATACACC TTTAACTGCT 
AGTTTTAGTC CTTGCAGAAT GGTTCGAATC ACTGTTCATA AAATTGCAAC AAAATATTGG 
TGTGAGGATA GATGTGAATT TACAGATCCT AAACAAATGT TAGTTGTTGA AATTTGGACT 
GATCCAAGAA TGCTACCAAA AAATGTTCTA TTATATGGTA TTAAAAATAT TAAAAAAATT 
TTAAACAAAT TTAGAGAAAT GATAATCAAT GATACAGATT TTCCATGCGA TCAAGAAGAT 
CGAGAAATTA AAAAATTATG GCCTTTCATT GATAGATATA AATATTTACA AACTAAACAG 
AAAATGGAAG GAGGCCCACC TATAGTTAAT GTTGATGAAG AACTAAATAC AAAAAATACT 
AATGTTAATA CTGATCAAAA TGGATTAAAA ATGGATGAAC AAATTTTTAA AAATCCATTT 
ACTCAATCTC TTATGGACCC AGGAAATTTT CCAAAACATT CAAATATAAT GTTGCCATTG 
CAACAAACCC CCCCTCCATA TATCGACACT TTGGATTGGC TTAAAATGGA AGTGAATAAG 
GATAAAAATT CTACCAAACT TGATGGAAGA AATAAAAGAC AACATGATAA ATTTAAAAAC 
AAACGGATAT TTGACTATGA TAATTATTTG GATGATCAGC TTGCTGATAT ATTAAGTGAT 
AATCCGAGCT CTTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022713710.1
CDS	1..2418
Translation	MRLITISVWVLTILFTYNKCLKVKKLFYIPSNKENIFFENGLNKKKQNCSEKPFYTIRKYHASKNGAKHILGNNKDNNNNNTNPDINEEYKVFQKTNFIKKYQITKEEIDTYIEQIKNSKASGYEPKFPKDAFRTPDGLTNVILDYKYKNDNLKIHNYYYFFMQFLKKLSENNDNQNPNIKQPKNDNSLINIHDFLYLKKKGFFEGELYTWKNWIILNRGEWKDEIGYDNNENEEYEIKTIRPIVEPKMKRMPIEYWGSFRAIDFNVNHYPIYKKLFDYFNKINVTEDEPYHKIHPFLFYPRFSVGRDRGGLSYGDANYFGNYGDIYKKNEERKKRLKMLKENNNNGDASIDFDFGQNDNYENEDSKNNEDKESVINSNIHKEHFIDKYDFGPNDIKIEEATDVLIYPQNGRLYQKFYIGPLNITDGHTFGSLIKYVCQSQIYGYAIVGIKIHNMNEDTKIENTQEDLLEIALNLSDVCIYSKEINIETNIRLIFKGPLMLVAGMIPLPSHLKVVNKEQYICTIKENGYIDISIKIEYGKGHWITYDKGLYKREIGSDNECMKKRQIKEVVNNNYTPLTASFSPCRMVRITVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNIKKILNKFREMIINDTDFPCDQEDREIKKLWPFIDRYKYLQTKQKMEGGPPIVNVDEELNTKNTNVNTDQNGLKMDEQIFKNPFTQSLMDPGNFPKHSNIMLPLQQTPPPYIDTLDWLKMEVNKDKNSTKLDGRNKRQHDKFKNKRIFDYDNYLDDQLADILSDNPSSS

Target ORF information:

RefSeq Version	XM_022857831.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA DNA-directed RNA polymerase, alpha subunit, putative (PBANKA_133590), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022857831.1

ORF Insert Sequence:

ATGCGACTCA TTACTATTTC AGTATGGGTA TTAACAATAC TTTTTACATA TAATAAATGT 
TTAAAAGTTA AAAAGTTATT TTATATCCCA AGCAATAAAG AAAATATATT TTTTGAAAAT 
GGATTAAATA AAAAAAAGCA AAATTGTTCA GAAAAACCAT TTTATACAAT CAGAAAATAT 
CACGCCTCAA AAAATGGCGC AAAACATATC CTAGGAAACA ATAAGGATAA CAACAATAAT 
AATACTAATC CTGACATAAA TGAGGAATAT AAAGTATTTC AAAAAACAAA TTTCATAAAA 
AAGTACCAAA TAACAAAAGA AGAAATTGAC ACTTATATTG AGCAAATAAA AAACAGCAAA 
GCAAGTGGTT ATGAACCTAA ATTTCCAAAA GATGCATTTA GAACACCAGA TGGATTAACA 
AATGTTATTT TGGATTATAA ATATAAAAAT GATAATTTAA AAATACACAA TTATTATTAT 
TTTTTTATGC AATTTTTAAA AAAACTATCA GAAAATAATG ATAACCAAAA TCCTAATATT 
AAACAACCAA AAAATGACAA TAGCCTAATA AATATACACG ATTTTTTATA CTTAAAAAAA 
AAAGGGTTTT TTGAAGGAGA ATTATATACC TGGAAAAATT GGATCATACT TAATAGAGGG 
GAATGGAAAG ATGAAATAGG ATATGATAAT AATGAAAATG AAGAATATGA AATAAAAACA 
ATAAGACCAA TTGTGGAACC CAAAATGAAA AGAATGCCAA TAGAGTATTG GGGAAGTTTT 
AGAGCAATTG ATTTTAATGT AAATCATTAT CCTATATATA AAAAATTATT CGATTATTTT 
AATAAAATAA ATGTAACTGA GGATGAACCA TATCACAAAA TTCATCCTTT TCTTTTTTAT 
CCTCGATTTA GTGTGGGTCG AGATAGAGGA GGTTTGAGTT ATGGTGATGC AAATTATTTT 
GGAAATTATG GAGATATTTA TAAAAAAAAT GAAGAAAGAA AAAAAAGATT AAAAATGTTG 
AAAGAAAATA ATAATAATGG AGATGCAAGC ATAGATTTCG ATTTTGGTCA AAATGATAAT 
TATGAAAATG AAGATTCAAA AAATAATGAG GATAAAGAAA GTGTTATAAA TTCGAATATA 
CATAAAGAGC ATTTTATTGA CAAATATGAT TTTGGCCCCA ATGATATTAA AATTGAAGAA 
GCAACAGACG TATTAATATA TCCACAAAAT GGAAGATTAT ATCAAAAATT TTATATAGGT 
CCATTAAATA TAACAGATGG ACACACATTT GGTTCATTAA TTAAATATGT ATGTCAAAGT 
CAAATATATG GTTATGCTAT AGTAGGTATA AAAATACATA ATATGAATGA AGATACAAAA 
ATTGAAAACA CACAAGAAGA TTTACTTGAA ATTGCTTTAA ATTTATCTGA TGTTTGCATA 
TATAGTAAAG AAATAAATAT AGAAACAAAT ATTCGTTTAA TTTTTAAAGG ACCTTTAATG 
TTAGTTGCTG GAATGATCCC ATTACCATCT CATTTAAAAG TTGTAAATAA AGAACAATAT 
ATATGTACAA TAAAAGAAAA TGGATACATT GATATTTCTA TTAAAATTGA ATATGGTAAA 
GGACATTGGA TAACATATGA TAAAGGTTTA TATAAAAGAG AAATAGGATC AGATAATGAA 
TGTATGAAAA AAAGACAAAT AAAAGAAGTT GTAAATAACA ATTATACACC TTTAACTGCT 
AGTTTTAGTC CTTGCAGAAT GGTTCGAATC ACTGTTCATA AAATTGCAAC AAAATATTGG 
TGTGAGGATA GATGTGAATT TACAGATCCT AAACAAATGT TAGTTGTTGA AATTTGGACT 
GATCCAAGAA TGCTACCAAA AAATGTTCTA TTATATGGTA TTAAAAATAT TAAAAAAATT 
TTAAACAAAT TTAGAGAAAT GATAATCAAT GATACAGATT TTCCATGCGA TCAAGAAGAT 
CGAGAAATTA AAAAATTATG GCCTTTCATT GATAGATATA AATATTTACA AACTAAACAG 
AAAATGGAAG GAGGCCCACC TATAGTTAAT GTTGATGAAG AACTAAATAC AAAAAATACT 
AATGTTAATA CTGATCAAAA TGGATTAAAA ATGGATGAAC AAATTTTTAA AAATCCATTT 
ACTCAATCTC TTATGGACCC AGGAAATTTT CCAAAACATT CAAATATAAT GTTGCCATTG 
CAACAAACCC CCCCTCCATA TATCGACACT TTGGATTGGC TTAAAATGGA AGTGAATAAG 
GATAAAAATT CTACCAAACT TGATGGAAGA AATAAAAGAC AACATGATAA ATTTAAAAAC 
AAACGGATAT TTGACTATGA TAATTATTTG GATGATCAGC TTGCTGATAT ATTAAGTGAT 
AATCCGAGCT CTTCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000837.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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