PB000402.01.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000402.01.0
Entrez Gene ID	3426351
Full Name	RNA-binding protein, putative
Synonyms	PB000402.01.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_022858120.1	XP_022713972.1	RNA-binding protein, putative
XM_672706.1	XP_677798.1	Pb-reticulocyte binding protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000402.01.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000402.01.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07498	XM_022858120.1 Latest version!	Plasmodium berghei ANKA RNA-binding protein, putative (PBANKA_142560), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000402.01.0 ( XM_022858120.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022713972.1 Plasmodium berghei ANKA RNA-binding protein, putative (PBANKA_142560), partial mRNA.

Price & Availability↑

CloneID	OPm07498
Clone ID Related Accession (Same CDS sequence)	XM_022858120.1
Accession Version	XM_022858120.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3423bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	RNA-binding protein, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). COMPLETENESS: incomplete on both ends.

ATGATTTTCA CAAAGCAATG CTTGTTTCTA TCATTTTTTG TAGTCATTGT ATCATCTTTT 
TTGAAGCCCA AATTATTGCT AAACAACTAT ATATACTCCA AGACTAGTCA ATTTAAGAAA 
AGAAAGAAAG TAATTAATTA CCAATTATTA AAAAGTAAAG ATAAAGATGT CGAATCTTAC 
ATTCCCCATA TTTATAAGGA TATTGTACCA TCATTAAAAG AATTAGCTGA TCAAGAATAC 
TCTTATAAGC AACTTTTAAA TGCATATATT CCCGAAACAA TTGAAAGAGA GAAGAGAGAT 
AAATTAAACA AAAAAATAAA TCAAAAAAAT AGTAGAAAAC AAAGTAAGGA AAACAGAAAA 
ACTAATAATA ATAATGAAGT TGATGAAAAA GAGGAAAACG AAGATAATGA ATGTAATAAA 
GATTTATCAA ATAATATTGA CAAAATGATG GAAATAAAAA TGAAAGAAAA TGATATTAAA 
CATTTTGAAA ATTTAAGTGA AATAAATAAT CATAAAAATA AAAATAAAAT ATTAGATATA 
GCATATGATG TTATTGAAGA TACATTAAAA AATACTTATA TGGATCAAAA ATTAGGATTA 
GATAATGAAA ATAATGATTC AAAAAAAAAT TATTTAGAAA TCGCGAAAAA AAGAAAAGAC 
TTATTATATG ATAAATTAAT TAATAATTAT TCCATGTTAA ATAATTCTAG TACATTTGAT 
TTGTTTGGAG TTTTTTATGA CAACAATAAT TATAAAGATG ATAATAAGTT AATAGAAGAA 
CTTGACAAAA TTATGAATTT GGAGCCTTTT AAAAGTAACA AAGATAATAT TGATGAAGAT 
ATTGATGTCC TTTTAAAAAA AGATAAAATA CCTACACATA TTCGTAACTT TATTTTAAAG 
TATAAAAATT TGAGAAAAAT TAATATGTCA AATAAGAAAA TACATCATAC AAAAAAAAAC 
GAGAATGAGC AGGTGAAAGA AAGTGGTGGT GTTAAACAAA TGGACAACGA TGATAATGTA 
GATAATGAAA AAGAGAAAGA CGAAGAAAAC GGAAATTATG AAAACAATAT AAAAGATGAA 
AATGGAGAAA ATATATACAA CGATTTTAAT AGAGACTTAA ACAAAGTTTT GATGACTTTT 
AATAAAAATT TAACTAATGA AAAATTAATA AAGAGAGATA AATACATTAT AGATGAGTTA 
TATGAAGAAT ATAAAAAGCA TATAAAAAAT ATGAGCATTA AAAGAAATAA ATTAGAACCA 
CAAAAAGATA ATTATGATTT TTTAACATTT GTTCATGAAT ATGGTGAAGA GTTTTTTTTC 
CAAAAATATG GATATTTTGA TAATTATCTA AAGGAAAATG TTGAAAAAAT TAAAAATAAA 
GTTAGGAGCG AAAATGCAAG TATAGTAAGC ATTCCAAATA TTATGAATTC TGAATCGAAT 
TTAGAACAAG AGAAATCTTC GACAATTACT AAATCAAATG GCCCAGCAAA TAATATGGGA 
AATGAAAAAG ACAACATAAA TGAAGATTTT TTAAATGATT CTCCTGAAAA AAGAATCATT 
AAACAAAATA ATAGGAAAAT AAATAATGAG AAGAATAACA CACAAATGCG TAATAATTTA 
GACTGGAGAA AAGAAAGTAA TAAATTAGAA AGTTATATGC TATCAAATAT AGTACACGAA 
TATAATAAAA GAATATATGA TATATATAAA CCTAATGATA TGATAACAAA CCAATATGGA 
TTTAATAATT ATATTGACAA TGAAGAATAT GATATAGATA TAAATGTTTC TTTAAATAAA 
TATAGTATAA TGAATTATGA TAGTAAAGAG GAATTAAATA ATGATGAAAG TTTATATGTT 
GGTAAATTAA TATTTGGAAA AATATTTAGA ATTGAGAAAA ATATGGCAAT TGTAGATATA 
AATTATTCAC ATTATGGAGA AATCCATTCA GATCAAATGC CATACAATAT TACTAATATT 
AGTGATGTAT TTAAAGTTAA TGATAAATTA ATATTTGAAA TATATAAAAT GTATCCTAAT 
AGAATTGAAT TAACACTAAA AAATATTCAA AAAATTAACG ACCTTAATAA AATATTATTA 
TATAAAACAC AAGATATTCC TTTTGAAGTA ACAGTTTTGT CTATAATAAA AAATGGTATA 
ACTGTTTCTT ATAATGATAT ATATACATTT ATTCATATAT CTGCTATATC CTCTAAATAT 
AAAGTTATAG TAGACGAAAA TGAAACTATT GATTCAAATT TATTAAATAA AAAAATAAAA 
GTATTTTGTA CTGATATTAA TAAATTAAGT TTTTCAAACT TATTATATGA GCAAAATGAA 
CAATTAAAAA ATATAAATAT GTATGATGTG ATTGACGTGG AAATTATACA TATATCCAAA 
TACGGTATAA TGGTAAAATA TAATGATATT GTTGGGCTTA TACACATATC AGAAATTTCC 
AGAAAAAAAA TCGAAAATAT TAATAATGTT TTCAAAATTA ATGAAAAGAT TAAAGGAATG 
TTAATAAATA TAGATTATTA TAACAAACGA TTCTCTTTAT CTACTAAAAT TTTAGAAACT 
CACGATAAAA ATTTTATTGA TAATAGAGAT GACATTTATA ATAATATTGA GCATATTATT 
AATAACATTA AAAAAAGAAG TAATAAAATG GAAGTTAACG ATTCGAATAT TAAGAATCAG 
TTATTATCTC TAATTGATAT ATACAAAGAT GGTAATGGGT CTGAAAAAAT GAAAACTAAA 
GAGGGAAAAG ATGAAACTAC TAATCAACAT AAAAAAATAC AAGAGGAAAT AAAACTTTAC 
GAAAATGAAA AACTAGATAA ACACCCCCAA GTTACTAGTG AAAAAACTGG GAGTCAAGCT 
GAACATATTG CAGACATGAA AACTGATAAT AATATATTTG ATGGAGAAGA AAAATATAGC 
GTTAATTCTA TTGATAATCA TATTAAAAAA ATACAAGAAA AAGATCAAAA CGACGATGAT 
GGCACACTCT TCGAGTTAAA TCAATCTGAA GAAGAAAAAG AAGAATTATC TATTGATACC 
CACAATGAAA TTATCCCATA TCTACTTCTA AAGAAGTCCG ATTGCAACAA AGAAGAACAT 
GAGGAAGAAA AGAAGGAAAT TGTTTGGAAC CTGGACGACG AAGAATTTTT GCATTCTAAT 
TCTCCGACTC AGAATTCTCA ATATATCGAA TATCAGTGGT CATATTTAAA AGACAAAAAA 
TGGATACCCT TTCCATATAA CGTCAATAGA ATTATAAATT ACTATTTCAA CATTAACGAT 
GATTTTTTTA CGTATAAGGA AAAAAATGTA ACATACGAAA TATATTTTGC AAAAAACGTA 
AGGATTGATT TGTCTACTGG TTTGCAAAAC AAGATTAGAA AGACATTAAA GAATTTATCT 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022713972.1
CDS	1..3423
Translation	MIFTKQCLFLSFFVVIVSSFLKPKLLLNNYIYSKTSQFKKRKKVINYQLLKSKDKDVESYIPHIYKDIVPSLKELADQEYSYKQLLNAYIPETIEREKRDKLNKKINQKNSRKQSKENRKTNNNNEVDEKEENEDNECNKDLSNNIDKMMEIKMKENDIKHFENLSEINNHKNKNKILDIAYDVIEDTLKNTYMDQKLGLDNENNDSKKNYLEIAKKRKDLLYDKLINNYSMLNNSSTFDLFGVFYDNNNYKDDNKLIEELDKIMNLEPFKSNKDNIDEDIDVLLKKDKIPTHIRNFILKYKNLRKINMSNKKIHHTKKNENEQVKESGGVKQMDNDDNVDNEKEKDEENGNYENNIKDENGENIYNDFNRDLNKVLMTFNKNLTNEKLIKRDKYIIDELYEEYKKHIKNMSIKRNKLEPQKDNYDFLTFVHEYGEEFFFQKYGYFDNYLKENVEKIKNKVRSENASIVSIPNIMNSESNLEQEKSSTITKSNGPANNMGNEKDNINEDFLNDSPEKRIIKQNNRKINNEKNNTQMRNNLDWRKESNKLESYMLSNIVHEYNKRIYDIYKPNDMITNQYGFNNYIDNEEYDIDINVSLNKYSIMNYDSKEELNNDESLYVGKLIFGKIFRIEKNMAIVDINYSHYGEIHSDQMPYNITNISDVFKVNDKLIFEIYKMYPNRIELTLKNIQKINDLNKILLYKTQDIPFEVTVLSIIKNGITVSYNDIYTFIHISAISSKYKVIVDENETIDSNLLNKKIKVFCTDINKLSFSNLLYEQNEQLKNINMYDVIDVEIIHISKYGIMVKYNDIVGLIHISEISRKKIENINNVFKINEKIKGMLINIDYYNKRFSLSTKILETHDKNFIDNRDDIYNNIEHIINNIKKRSNKMEVNDSNIKNQLLSLIDIYKDGNGSEKMKTKEGKDETTNQHKKIQEEIKLYENEKLDKHPQVTSEKTGSQAEHIADMKTDNNIFDGEEKYSVNSIDNHIKKIQEKDQNDDDGTLFELNQSEEEKEELSIDTHNEIIPYLLLKKSDCNKEEHEEEKKEIVWNLDDEEFLHSNSPTQNSQYIEYQWSYLKDKKWIPFPYNVNRIINYYFNINDDFFTYKEKNVTYEIYFAKNVRIDLSTGLQNKIRKTLKNLS

Target ORF information:

RefSeq Version	XM_022858120.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA RNA-binding protein, putative (PBANKA_142560), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022858120.1

ORF Insert Sequence:

ATGATTTTCA CAAAGCAATG CTTGTTTCTA TCATTTTTTG TAGTCATTGT ATCATCTTTT 
TTGAAGCCCA AATTATTGCT AAACAACTAT ATATACTCCA AGACTAGTCA ATTTAAGAAA 
AGAAAGAAAG TAATTAATTA CCAATTATTA AAAAGTAAAG ATAAAGATGT CGAATCTTAC 
ATTCCCCATA TTTATAAGGA TATTGTACCA TCATTAAAAG AATTAGCTGA TCAAGAATAC 
TCTTATAAGC AACTTTTAAA TGCATATATT CCCGAAACAA TTGAAAGAGA GAAGAGAGAT 
AAATTAAACA AAAAAATAAA TCAAAAAAAT AGTAGAAAAC AAAGTAAGGA AAACAGAAAA 
ACTAATAATA ATAATGAAGT TGATGAAAAA GAGGAAAACG AAGATAATGA ATGTAATAAA 
GATTTATCAA ATAATATTGA CAAAATGATG GAAATAAAAA TGAAAGAAAA TGATATTAAA 
CATTTTGAAA ATTTAAGTGA AATAAATAAT CATAAAAATA AAAATAAAAT ATTAGATATA 
GCATATGATG TTATTGAAGA TACATTAAAA AATACTTATA TGGATCAAAA ATTAGGATTA 
GATAATGAAA ATAATGATTC AAAAAAAAAT TATTTAGAAA TCGCGAAAAA AAGAAAAGAC 
TTATTATATG ATAAATTAAT TAATAATTAT TCCATGTTAA ATAATTCTAG TACATTTGAT 
TTGTTTGGAG TTTTTTATGA CAACAATAAT TATAAAGATG ATAATAAGTT AATAGAAGAA 
CTTGACAAAA TTATGAATTT GGAGCCTTTT AAAAGTAACA AAGATAATAT TGATGAAGAT 
ATTGATGTCC TTTTAAAAAA AGATAAAATA CCTACACATA TTCGTAACTT TATTTTAAAG 
TATAAAAATT TGAGAAAAAT TAATATGTCA AATAAGAAAA TACATCATAC AAAAAAAAAC 
GAGAATGAGC AGGTGAAAGA AAGTGGTGGT GTTAAACAAA TGGACAACGA TGATAATGTA 
GATAATGAAA AAGAGAAAGA CGAAGAAAAC GGAAATTATG AAAACAATAT AAAAGATGAA 
AATGGAGAAA ATATATACAA CGATTTTAAT AGAGACTTAA ACAAAGTTTT GATGACTTTT 
AATAAAAATT TAACTAATGA AAAATTAATA AAGAGAGATA AATACATTAT AGATGAGTTA 
TATGAAGAAT ATAAAAAGCA TATAAAAAAT ATGAGCATTA AAAGAAATAA ATTAGAACCA 
CAAAAAGATA ATTATGATTT TTTAACATTT GTTCATGAAT ATGGTGAAGA GTTTTTTTTC 
CAAAAATATG GATATTTTGA TAATTATCTA AAGGAAAATG TTGAAAAAAT TAAAAATAAA 
GTTAGGAGCG AAAATGCAAG TATAGTAAGC ATTCCAAATA TTATGAATTC TGAATCGAAT 
TTAGAACAAG AGAAATCTTC GACAATTACT AAATCAAATG GCCCAGCAAA TAATATGGGA 
AATGAAAAAG ACAACATAAA TGAAGATTTT TTAAATGATT CTCCTGAAAA AAGAATCATT 
AAACAAAATA ATAGGAAAAT AAATAATGAG AAGAATAACA CACAAATGCG TAATAATTTA 
GACTGGAGAA AAGAAAGTAA TAAATTAGAA AGTTATATGC TATCAAATAT AGTACACGAA 
TATAATAAAA GAATATATGA TATATATAAA CCTAATGATA TGATAACAAA CCAATATGGA 
TTTAATAATT ATATTGACAA TGAAGAATAT GATATAGATA TAAATGTTTC TTTAAATAAA 
TATAGTATAA TGAATTATGA TAGTAAAGAG GAATTAAATA ATGATGAAAG TTTATATGTT 
GGTAAATTAA TATTTGGAAA AATATTTAGA ATTGAGAAAA ATATGGCAAT TGTAGATATA 
AATTATTCAC ATTATGGAGA AATCCATTCA GATCAAATGC CATACAATAT TACTAATATT 
AGTGATGTAT TTAAAGTTAA TGATAAATTA ATATTTGAAA TATATAAAAT GTATCCTAAT 
AGAATTGAAT TAACACTAAA AAATATTCAA AAAATTAACG ACCTTAATAA AATATTATTA 
TATAAAACAC AAGATATTCC TTTTGAAGTA ACAGTTTTGT CTATAATAAA AAATGGTATA 
ACTGTTTCTT ATAATGATAT ATATACATTT ATTCATATAT CTGCTATATC CTCTAAATAT 
AAAGTTATAG TAGACGAAAA TGAAACTATT GATTCAAATT TATTAAATAA AAAAATAAAA 
GTATTTTGTA CTGATATTAA TAAATTAAGT TTTTCAAACT TATTATATGA GCAAAATGAA 
CAATTAAAAA ATATAAATAT GTATGATGTG ATTGACGTGG AAATTATACA TATATCCAAA 
TACGGTATAA TGGTAAAATA TAATGATATT GTTGGGCTTA TACACATATC AGAAATTTCC 
AGAAAAAAAA TCGAAAATAT TAATAATGTT TTCAAAATTA ATGAAAAGAT TAAAGGAATG 
TTAATAAATA TAGATTATTA TAACAAACGA TTCTCTTTAT CTACTAAAAT TTTAGAAACT 
CACGATAAAA ATTTTATTGA TAATAGAGAT GACATTTATA ATAATATTGA GCATATTATT 
AATAACATTA AAAAAAGAAG TAATAAAATG GAAGTTAACG ATTCGAATAT TAAGAATCAG 
TTATTATCTC TAATTGATAT ATACAAAGAT GGTAATGGGT CTGAAAAAAT GAAAACTAAA 
GAGGGAAAAG ATGAAACTAC TAATCAACAT AAAAAAATAC AAGAGGAAAT AAAACTTTAC 
GAAAATGAAA AACTAGATAA ACACCCCCAA GTTACTAGTG AAAAAACTGG GAGTCAAGCT 
GAACATATTG CAGACATGAA AACTGATAAT AATATATTTG ATGGAGAAGA AAAATATAGC 
GTTAATTCTA TTGATAATCA TATTAAAAAA ATACAAGAAA AAGATCAAAA CGACGATGAT 
GGCACACTCT TCGAGTTAAA TCAATCTGAA GAAGAAAAAG AAGAATTATC TATTGATACC 
CACAATGAAA TTATCCCATA TCTACTTCTA AAGAAGTCCG ATTGCAACAA AGAAGAACAT 
GAGGAAGAAA AGAAGGAAAT TGTTTGGAAC CTGGACGACG AAGAATTTTT GCATTCTAAT 
TCTCCGACTC AGAATTCTCA ATATATCGAA TATCAGTGGT CATATTTAAA AGACAAAAAA 
TGGATACCCT TTCCATATAA CGTCAATAGA ATTATAAATT ACTATTTCAA CATTAACGAT 
GATTTTTTTA CGTATAAGGA AAAAAATGTA ACATACGAAA TATATTTTGC AAAAAACGTA 
AGGATTGATT TGTCTACTGG TTTGCAAAAC AAGATTAGAA AGACATTAAA GAATTTATCT 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000402.01.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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