ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_20872 cDNA ORF clone

PHATRDRAFT_20872 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_20872 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_20872 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb07332 XM_002180834.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_20872 ( XM_002180834.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002180870.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb07332
    Clone ID Related Accession (Same CDS sequence) XM_002180834.1
    Accession Version XM_002180834.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3954bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011678). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    ATGGAAGAAT CAGCGCGAAA AGATGCCTCT TCGGAACGCA AACGCATCCC CGAAGAGGAA 
    GCGTCGCTAC CTTCCCATCT CTTCTTCTTT TGGGCTCGCG GTCTCTTTCA AAGAGCTTCG 
    GTGTTGAGCA AGCAAGGCAA AGCTCTGGAA CACGAAGACT TGCTCCCTCT CCCTACGATT 
    GACTACGGTA AACGCATTGG ACCGGCGTTT GCCAATGCCT GGAACAAGGA AGAAGAGCAC 
    ATGCAAAGCG AGCAAAAAAG ACACAGCGCG TCGGAAGCGC CCACGGTAAT TGGTGCGGGT 
    TTGGCGGATG CTGTGGATGG TAGCTATTCC ACAACCCGTG TTCGCCACGC CATTTTTGCG 
    GTAATCGGTA GGCGATTTCT ATTTGCTGGT CTCATCAAAG TTCTAAACAC GGCTTTGCAA 
    TTCAGCTTCC CCCTACTTCT CAACGAGATC CTCGCATTTA TAGAGGACAC GCAGGCTGGA 
    AGAATTCCCG AAGATGCTTC GTGGGAAGAC AAGTACCGTG GCTACTGGCT ATCGGCTATT 
    TTGTTTGCCG CGATGGCAGC GAAAGCCATT ACGGAAAACG TATACTTTCA TAAGGTATAC 
    CGAGCTGGCT ACCAGGCTCG AGTTGCTGTT TCCGCGGCTG TTTATAATAA GGCTCTACGT 
    CTAGCAAACG CCGAGCGCCA AGGCACTACA TTGGGCGAGC TTATCAATTT AATGCAAGTC 
    GATGCCACCA AGATTGAAAT GTTTGTACCT CAAATTCACG TTTTGTGGGA TGGTGTGCTG 
    CAAATTTGTG GATACATTAC TATCCTGTAT ACGCTAATTG GATGGCCGTG TTTTGCGGGT 
    CTAGCAATCA TGATGTTTGC TGGCCCGGTA CAAGGAATCA TCATGAAGCG ATTGTTTGCT 
    TTGAATCGTA CTATGGTCAA GCACACGGAT TCTCGCATCA AGACGACCAA CGAAGCTTTA 
    CAAGGCATTC AATGTGTGAA GATGTATACT TGGGAGGAGT CCTTTCAACG CGAAATTGGT 
    AAAGCCCGGA ACGAAGAATT GGATAATCTG AAGGGTGTCG CGTACTTGCG CGGTTTTTCG 
    CGGGCATACA TGGGTGCCTT GCCGGGAATT GTGGCGGTCG CATCGTTCAT TGTTTTCGCG 
    GCCGCCAAGA CTGGCTCCAC TATTTCCGCA TCAACCCTAT TTGCTGCTTT AGTGGCGTTC 
    GATCAGTTGC GATTTCCTTT GCTCTTTTAT CCTTTGGCGT TGGCACAGCT TGCACAAGCT 
    AACGTTAGCG CTCGCCGTGT TGAAATCTTT TTGCAAATGC AAGAGATTGG AAAAGACGAT 
    TTGAAAGACG GAGGTCTTGA AGTGAGTTCA ATGGACGAAG CGGAAACCCC AACCAAACGC 
    TTTCCAAAGG CCATTCTTGA GAGCGTTTCT CTCCGAGTGG CCCCGGGAGA GCTCTGTGCG 
    GTTGTCGGCC GTGTCGGTAG CGGCAAAAGC ACACTTTGCT CTGCAATTTT AGGTGAAACT 
    CTATTACAGA GCGGAGAAGT TCAAGTTAAG GGGAAAATTG CATATGCATC GCAGTCAGCC 
    TGGATACTGA ATGCGACACT GCGTGACAAC ATTCTGTTTG GTATGCCATT TGATCAAGAA 
    AAATATGATA AAGTGCTGAA AGCTTGCCAG CTCTCACATG ACCTGGATAT GCTTGACAAC 
    GGTGACATGA CCGAAATTGG AGAGCGAGGC ATTAATCTGT CTGGTGGTCA AAAGCAGCGC 
    GTTTCAGTTG CTCGTGCGGC ATATTCGGAT GCCGACCTTG TAGTGCTGGA CGATCCCTTG 
    TCCGCTCTCG ATCCTGAAGT GGGACGCCAG TTGTTTGAGG AGTGCATTGT TGATCTAATG 
    AAGGAAAAAA CTCGACTCTT CGTCACAAAT CAACTCCAAT TTCTTCGGTA TTGCGACTCA 
    GTTGTTGCTC TTGGGAAGCG AAAGGTCATC GAACAGGGAA CGTTTGACGA CCTGAATGCT 
    GCCGAAGGTG GAGAAGTGAG GCGACTTTTG AACGAGTTGA AGTCTTCCGA ACAGTCACAA 
    AACCATGAAC AGGAGGAGAA TTCTAAGGTG GCAACTGTTG CGAGAACGGC ATCCGCCGCA 
    AAAGATCCCT CCGTCAACAG AAAGAAAGAG AAGAAAAGCG ATGCTGGTCT CGTGACAAAG 
    GAAGAGCGGA ATATTGGGGC AGTGTCATGG GAGGTATACA AGAAATACGT ACTAGCCGGG 
    GGTGGTTATT TCAAGTTCTT CTGCGTGTAT TTTGGATTTG TTCTCTCCGC AGCTAACGGT 
    TTGGCCAGCA CATCCTGGGT GTCTTTTTGG ACGAGCGATT CTGAGTACGA AAGGAACTCA 
    CAGGTGTTTT ACCTTAGTAT GTACGCTATG CTTGCAGTTA CTCTCGGACT GTTCACCTAC 
    ATGCGAGCTT TCCTCCTCGC TCGGTTCGGC GTTCGTGCCG CGGAAAAGTT TCACAAAGAC 
    TTGCTGGAGT CCGTTCTCCA AGCACCCCAA AGTTTTTTTG ATACTACACC TGTGGGTCGG 
    ATTCTTTCTC GATTCTCGAA GGACATGTAT TCGATCGATG TTGAGTTGAG CGACTATTTC 
    GATTTTTTCC TTTTCACGTC ACTTACTGTC GTCGTTTCTC TGGGAACAAT CATGTTTGTG 
    ACGCCCTGGT TCGGAGTTGC TATTCTACCA CTGGGACTTG TCTATTTTCG TGTGCTTAAT 
    TACTTTCGGA ACGTCTCTCG TGAGACCAAG CGCTTGGAAA GTATTTCGCG CTCTCCTGTA 
    TACGCTCATT TCTCTGAAAC CCTCGGTGGG CTTTCCACCA TTCGAGCCTA TGGACAGTCC 
    ATTCGCTTCA TGGAAGATTT TGAAGGCAAA GTTGACTACA ATACTCGTGC TTACTATAGC 
    AATAAGACGG CTGACCGATG GTTGTCAGTT CGTCTTGAAT TGATCGGTGC AACGATTGCA 
    GGGCTTGCAG CGGTATTCTC CTCCAACGTT GCTATTTCTG ATTCTGTTTC CGGTCAAGAC 
    AGCGATAGCA ATTTTGCTTC GTTGGCCGGT TTGTCTCTTT CCTTTGCTAT CTCTTTAACC 
    AGTTTACTAA ACTGGTGCGT ACGCTCGTTT GCGCAGCTCG AAGCCGCCAT GAATGCGTGT 
    GAACGTGTGC TATATTACAC GGAGAACATT CCGCAAGAAG CCCCGCCGGA TCGTGCTGCG 
    TTTAAGTGGC CCGACAAGGG AGAAATTACG TTGAAGAATC TTCGAATGCG GTATCGAGCG 
    GAAACACCGC TGGTCTTGAA GGGACTAAAC GTGACCATTC ATGGTGGAGA AAGGATTGGA 
    GTCGTAGGAC GTACGGGGAG TGGCAAGAGC TCACTCCTGT TGACTCTGTT GCGTTTGGTG 
    GAACCTTCCT TAGAAGAGGG AGATTACCAA GCTCCTCTTT CAATCGATGG AGTTGACGTG 
    CTTCGCATCG GCCTGAAAGA TCTCCGCTCC AAGCTTGGTA TTATTCCACA AAACCCTGTT 
    TTGTTTTCCG GTACCGTTCG TAGCAACATT GATCCGTTCG ACGAATACTC CGACAAACAA 
    ATTTGGGATG CCTTGTCCCG ATGCGGAATG AAAGAGTCGG TCGAAAATAT GCCGGGTATG 
    CTGAATGCTA GTATCGCTGA ATACGGAGAG AATTTATCGG CCGGAATGCG CCAGATGCTG 
    GTCCTTGGTC GTGCTTTGTT GAAGCAATGC CGTATTTTGC TCTTGGATGA AGCCACTTCG 
    AGCGTGGACT ACGAGACGGA TCGTGAGATC CAAAGAACGC TGCGGGAAGC CTTTAATCAG 
    TGCACCATTC TCACTATTGC TCATCGCATC AATACTATTA TGGACAGCGA CAAGATTCTG 
    GTCATGAAGG ATGGATATGT GGAGGAGTTT GCCCCTCCTC AAGAGCTTCT CAAGGACGAG 
    AATTCCACCT TTTCGGAAAT TGTACGACAC GCCAAGTCCG GAGAGCATCA GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002180870.1
    CDS215..4168
    Translation

    Target ORF information:

    RefSeq Version XM_002180834.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002180834.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    ATGGAAGAAT CAGCGCGAAA AGATGCCTCT TCGGAACGCA AACGCATCCC CGAAGAGGAA 
    GCGTCGCTAC CTTCCCATCT CTTCTTCTTT TGGGCTCGCG GTCTCTTTCA AAGAGCTTCG 
    GTGTTGAGCA AGCAAGGCAA AGCTCTGGAA CACGAAGACT TGCTCCCTCT CCCTACGATT 
    GACTACGGTA AACGCATTGG ACCGGCGTTT GCCAATGCCT GGAACAAGGA AGAAGAGCAC 
    ATGCAAAGCG AGCAAAAAAG ACACAGCGCG TCGGAAGCGC CCACGGTAAT TGGTGCGGGT 
    TTGGCGGATG CTGTGGATGG TAGCTATTCC ACAACCCGTG TTCGCCACGC CATTTTTGCG 
    GTAATCGGTA GGCGATTTCT ATTTGCTGGT CTCATCAAAG TTCTAAACAC GGCTTTGCAA 
    TTCAGCTTCC CCCTACTTCT CAACGAGATC CTCGCATTTA TAGAGGACAC GCAGGCTGGA 
    AGAATTCCCG AAGATGCTTC GTGGGAAGAC AAGTACCGTG GCTACTGGCT ATCGGCTATT 
    TTGTTTGCCG CGATGGCAGC GAAAGCCATT ACGGAAAACG TATACTTTCA TAAGGTATAC 
    CGAGCTGGCT ACCAGGCTCG AGTTGCTGTT TCCGCGGCTG TTTATAATAA GGCTCTACGT 
    CTAGCAAACG CCGAGCGCCA AGGCACTACA TTGGGCGAGC TTATCAATTT AATGCAAGTC 
    GATGCCACCA AGATTGAAAT GTTTGTACCT CAAATTCACG TTTTGTGGGA TGGTGTGCTG 
    CAAATTTGTG GATACATTAC TATCCTGTAT ACGCTAATTG GATGGCCGTG TTTTGCGGGT 
    CTAGCAATCA TGATGTTTGC TGGCCCGGTA CAAGGAATCA TCATGAAGCG ATTGTTTGCT 
    TTGAATCGTA CTATGGTCAA GCACACGGAT TCTCGCATCA AGACGACCAA CGAAGCTTTA 
    CAAGGCATTC AATGTGTGAA GATGTATACT TGGGAGGAGT CCTTTCAACG CGAAATTGGT 
    AAAGCCCGGA ACGAAGAATT GGATAATCTG AAGGGTGTCG CGTACTTGCG CGGTTTTTCG 
    CGGGCATACA TGGGTGCCTT GCCGGGAATT GTGGCGGTCG CATCGTTCAT TGTTTTCGCG 
    GCCGCCAAGA CTGGCTCCAC TATTTCCGCA TCAACCCTAT TTGCTGCTTT AGTGGCGTTC 
    GATCAGTTGC GATTTCCTTT GCTCTTTTAT CCTTTGGCGT TGGCACAGCT TGCACAAGCT 
    AACGTTAGCG CTCGCCGTGT TGAAATCTTT TTGCAAATGC AAGAGATTGG AAAAGACGAT 
    TTGAAAGACG GAGGTCTTGA AGTGAGTTCA ATGGACGAAG CGGAAACCCC AACCAAACGC 
    TTTCCAAAGG CCATTCTTGA GAGCGTTTCT CTCCGAGTGG CCCCGGGAGA GCTCTGTGCG 
    GTTGTCGGCC GTGTCGGTAG CGGCAAAAGC ACACTTTGCT CTGCAATTTT AGGTGAAACT 
    CTATTACAGA GCGGAGAAGT TCAAGTTAAG GGGAAAATTG CATATGCATC GCAGTCAGCC 
    TGGATACTGA ATGCGACACT GCGTGACAAC ATTCTGTTTG GTATGCCATT TGATCAAGAA 
    AAATATGATA AAGTGCTGAA AGCTTGCCAG CTCTCACATG ACCTGGATAT GCTTGACAAC 
    GGTGACATGA CCGAAATTGG AGAGCGAGGC ATTAATCTGT CTGGTGGTCA AAAGCAGCGC 
    GTTTCAGTTG CTCGTGCGGC ATATTCGGAT GCCGACCTTG TAGTGCTGGA CGATCCCTTG 
    TCCGCTCTCG ATCCTGAAGT GGGACGCCAG TTGTTTGAGG AGTGCATTGT TGATCTAATG 
    AAGGAAAAAA CTCGACTCTT CGTCACAAAT CAACTCCAAT TTCTTCGGTA TTGCGACTCA 
    GTTGTTGCTC TTGGGAAGCG AAAGGTCATC GAACAGGGAA CGTTTGACGA CCTGAATGCT 
    GCCGAAGGTG GAGAAGTGAG GCGACTTTTG AACGAGTTGA AGTCTTCCGA ACAGTCACAA 
    AACCATGAAC AGGAGGAGAA TTCTAAGGTG GCAACTGTTG CGAGAACGGC ATCCGCCGCA 
    AAAGATCCCT CCGTCAACAG AAAGAAAGAG AAGAAAAGCG ATGCTGGTCT CGTGACAAAG 
    GAAGAGCGGA ATATTGGGGC AGTGTCATGG GAGGTATACA AGAAATACGT ACTAGCCGGG 
    GGTGGTTATT TCAAGTTCTT CTGCGTGTAT TTTGGATTTG TTCTCTCCGC AGCTAACGGT 
    TTGGCCAGCA CATCCTGGGT GTCTTTTTGG ACGAGCGATT CTGAGTACGA AAGGAACTCA 
    CAGGTGTTTT ACCTTAGTAT GTACGCTATG CTTGCAGTTA CTCTCGGACT GTTCACCTAC 
    ATGCGAGCTT TCCTCCTCGC TCGGTTCGGC GTTCGTGCCG CGGAAAAGTT TCACAAAGAC 
    TTGCTGGAGT CCGTTCTCCA AGCACCCCAA AGTTTTTTTG ATACTACACC TGTGGGTCGG 
    ATTCTTTCTC GATTCTCGAA GGACATGTAT TCGATCGATG TTGAGTTGAG CGACTATTTC 
    GATTTTTTCC TTTTCACGTC ACTTACTGTC GTCGTTTCTC TGGGAACAAT CATGTTTGTG 
    ACGCCCTGGT TCGGAGTTGC TATTCTACCA CTGGGACTTG TCTATTTTCG TGTGCTTAAT 
    TACTTTCGGA ACGTCTCTCG TGAGACCAAG CGCTTGGAAA GTATTTCGCG CTCTCCTGTA 
    TACGCTCATT TCTCTGAAAC CCTCGGTGGG CTTTCCACCA TTCGAGCCTA TGGACAGTCC 
    ATTCGCTTCA TGGAAGATTT TGAAGGCAAA GTTGACTACA ATACTCGTGC TTACTATAGC 
    AATAAGACGG CTGACCGATG GTTGTCAGTT CGTCTTGAAT TGATCGGTGC AACGATTGCA 
    GGGCTTGCAG CGGTATTCTC CTCCAACGTT GCTATTTCTG ATTCTGTTTC CGGTCAAGAC 
    AGCGATAGCA ATTTTGCTTC GTTGGCCGGT TTGTCTCTTT CCTTTGCTAT CTCTTTAACC 
    AGTTTACTAA ACTGGTGCGT ACGCTCGTTT GCGCAGCTCG AAGCCGCCAT GAATGCGTGT 
    GAACGTGTGC TATATTACAC GGAGAACATT CCGCAAGAAG CCCCGCCGGA TCGTGCTGCG 
    TTTAAGTGGC CCGACAAGGG AGAAATTACG TTGAAGAATC TTCGAATGCG GTATCGAGCG 
    GAAACACCGC TGGTCTTGAA GGGACTAAAC GTGACCATTC ATGGTGGAGA AAGGATTGGA 
    GTCGTAGGAC GTACGGGGAG TGGCAAGAGC TCACTCCTGT TGACTCTGTT GCGTTTGGTG 
    GAACCTTCCT TAGAAGAGGG AGATTACCAA GCTCCTCTTT CAATCGATGG AGTTGACGTG 
    CTTCGCATCG GCCTGAAAGA TCTCCGCTCC AAGCTTGGTA TTATTCCACA AAACCCTGTT 
    TTGTTTTCCG GTACCGTTCG TAGCAACATT GATCCGTTCG ACGAATACTC CGACAAACAA 
    ATTTGGGATG CCTTGTCCCG ATGCGGAATG AAAGAGTCGG TCGAAAATAT GCCGGGTATG 
    CTGAATGCTA GTATCGCTGA ATACGGAGAG AATTTATCGG CCGGAATGCG CCAGATGCTG 
    GTCCTTGGTC GTGCTTTGTT GAAGCAATGC CGTATTTTGC TCTTGGATGA AGCCACTTCG 
    AGCGTGGACT ACGAGACGGA TCGTGAGATC CAAAGAACGC TGCGGGAAGC CTTTAATCAG 
    TGCACCATTC TCACTATTGC TCATCGCATC AATACTATTA TGGACAGCGA CAAGATTCTG 
    GTCATGAAGG ATGGATATGT GGAGGAGTTT GCCCCTCCTC AAGAGCTTCT CAAGGACGAG 
    AATTCCACCT TTTCGGAAAT TGTACGACAC GCCAAGTCCG GAGAGCATCA GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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