ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_11088 cDNA ORF clone

PHATRDRAFT_11088 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_11088 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_11088 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb06457 XM_002178534.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
$799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_11088 ( XM_002178534.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002178570.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb06457
    Clone ID Related Accession (Same CDS sequence) XM_002178534.1
    Accession Version XM_002178534.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3261bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011672). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGACAATCG AAACAGAGTC TGGTGCCGTA TCGGGAACTC GAGGAACTGC CAAACGTGAT 
    ACGTTGCGAG CGAACGAAGT CGCTGTGCAA AAGATTTGGG ACGAAGAGAA GGTGTTTGAA 
    ACGGAACCCG ACGATCGTGA AAGTTTCATG GTGACTTTTC CATACCCTTA TTCGAATGGT 
    CATTTGCACA TTGGACATGC ATTTTCCTTG ACGAAGGCAA TTTTCCGAGC TCAATTCGAG 
    CGCCACCGAG GCAAGAATGT GCTGTTTCCA TTTGCCTTTC ATTGCACAGG CATGCCAATT 
    CAAGCGGCAG CGAATAAGCT AACATCGGAG ATTGAATTGT ATGGATGCCC TCCTCAGTTT 
    CCGGAAGCCG ATCCTGAAGT CCGTGCCAAG ATGGAAGCAG AAATTGCCGC CTCGAAAGAA 
    GCCAAGGCGG CCCAACCTGA AAATAAGTCA AAAGGGAGCA AGACAAAGCT TGTGCAAAAG 
    ACCGGAACGG GAATTGTGCG ACAGTGGAAC ATTCTCCTCA AAATGGTTCC GGAAGATGAG 
    ATTCCGGCAT TCCAGGATCC TTTGCATTGG CTGAGCTACT TTCCTCCAAT TGGTGTAGAC 
    CACTTACACA ACTTTGGAGC AGGCGTGGAT TGGCGGCGGG CGTTTATAAC TACGTATGTC 
    AATCCATACT ATGATGCATT CATTCGTTGG CAGTTCGAGG TATTGAAAGA GAAAGGCAAG 
    ATCCTTTTTG GGAAACGTAA CAATGTGTTC TCGCTGGTTG ACGGACAAGT TTGTGCAGAT 
    CACGATCGTT CGGAAGGTGA AGGTGTAGGA CCTCAGGAAT ATGTCCTGAT TAAGCTTAAA 
    GTGCTGCAGC CAGGCCACGG ACAGTCCCGC CATGCGAAGA TGGAAGCAAT TTTGGCGAAA 
    TATGACCAGC CTGTATATTT TGTCCCTGCT ACCCTGCGCC CTGAAACTAT GTACGGACAA 
    ACCAACTGCT TTGTCCTCCC TGACGGTGAA TACGGTGCCT ATATGATTGA TGCAACGAAC 
    GAAATTTTTA TCATGAGTGC GAGATCGGCT CGGGGACTCT CATGCCAATC ATACCAGGGA 
    AATGAATACT TTACCAAAGA GTTTGGTAAA ATCCTGTGTC TCGAAACGTT TACAGGTAGC 
    GAATTGCTGG GCTTGCCGTT AAAAGCTCCG ATGGCGAAGT ACGATAAGAT TTATACCCTT 
    CCATTGTTGA CGATAAGCAT GGGCAAAGGA ACTGGAGTGG TGACATCCGT CCCTAGTGAC 
    GCTCCCGATG ACTTTGTTTC ACTTAAAGCG CTACAGGACA AACCCGACTT TCGCGCGAAA 
    TACGGCATTA CGGACGACAT GGTCATGCCG TACGAAGTTG TTCCAATCAT CACAATAGAA 
    GGATACGGCG ATGCGTCTGC TGTCTTTATG TGTGAAAAGC TAAAGATTAC AAGCTTCAAC 
    GATAAGGCTA AGCTTCAGCA AGCCAAGGAT GAGACATACC TTAAGGGTTT TAATATGGGA 
    ATTATGAAAG TCGGAAGCCA TTCCGGAAAG AAGGTCAGCG ATGCCAAACC AATTATCAAG 
    CAGGAATTGA TTCTTGCTGG CCAGGCGTGT CTGTACTTTG AACCAGAATC TAGGGTGGTT 
    TCCCGAACGA GTGACGAGTG TGTTGTCGCT TCTACAGATC AGTGGTATCT GGCATATGGA 
    GAGGAGTCGT GGACTAAAGC TGTTAAAAAG CACGTCTTGA ACTCGGATAA TTTCAACGCA 
    TATGACCCGG CTGCTTTGCA CAAGTATGAC TACACCATTG GCTGGTTGCA AGAATGGGCG 
    TGTACTCGGC AGTTCGGTCT GGGAACATTC TTGCCATGGG ATAGAGCCTG GGTTATTGAG 
    AGTTTGTCGG ACAGCACTAT CTACATGTCC TTTTATACTA TCGCACATTT TCTCCAGGGA 
    GAAGGCAATT TGACAGGTGA CAAATCAAAG TCTCCTTGCA GCATTGATCC TGCAGATTTG 
    TCAAATGACG TATTTGATTT CATTTTTCGC AAAGGACCAT TGCCAAGTGA CTCAAATATC 
    CCGGCCAAGA CATTAGAGAA GATGCGTACC GAGTTCCGTT ATTGGTACCC GATGAATTTA 
    CGTGTGAGCG CGAAAGACTT GATTCAGAAC CATTTGACTA TGGCGCTTTT CAATCATGCC 
    GCTGTTTGGG AGGAGGAACC AGAGCTATGG CCCAAAGGAT ACTACTGCAA TGGGCATGTC 
    CTTGTGGATG CCGAGAAGAT GTCAAAGTCG AAGGGGAACT TCTTGATGAT GAATGATACA 
    ATACAAACGT ATGGTGCGGA TGCCACCCGG TTTGCCTGTG CCGACGCTGG CGACTCGTTA 
    GATGATGCGA ACTTCAGCCG AGAGACAGCC GACGCCGCCA TTCTATCTCT TATCACGGAA 
    GATGCATGGA TAAGTGAAAC GCTCACATCT GTGGACCTTC GATCCGGCGA AGAAAATCTG 
    ATCGATAAAA TTCTGTTGAA CGAAACAAAC CGCCTAATTG CTAGTGCTGG TAGTAATTTT 
    GCTCGAATGC AATTCAAGGA AGGACTTAAG GAAGGATGGT TTGAGATGCT CAACGCCCGC 
    AATGACTATC GAGCCTGGTG CAAGGATAGC GGTGTTCCAA TGCACAAAGG TGTAGTTCTA 
    CGGTGGGCAG AGACCATTGT AATTTTGATT TGCCCGATTT GTCCGCATTG GTCCGAGAGG 
    ATATGGAAAC AGATCGGAAA CATCGGGTTG GCCATTCGGG CACCATGGCC GGTGGCGGAG 
    GAAGAAGACA AAATTTTGAC TCGACAAGCC AAGTTTTTGA GAGATTCTAT AAAGCACTTC 
    CGTTCCCAGG CTGGGAGAGC AAAGAAGGGG TGGATGAGGG CTTCTATTCT TGTAAACGAT 
    AGCTATCCTC AGTGGAAGAT TGATACGCTT GTATGGATGC AAGGCCAGTA CGATGTATCG 
    TCTGGATTTT CTCCAGGATT CATGAAAGAC CTAAAGGATT ATACTGCAAA GTTTGTGAAA 
    GACAAGAAAT TGATCAAGTT TACAATGCAG TTCGCCTCAT TCATGAAGAA AGAAACAGAG 
    GATGTAGGTG ACGCCGCGCT CGACGTTCTG CTTCCCTTTG ACCAGAAAGA GATACTTCAG 
    GTAAGTATTG AATACATTAA GGCGCAGCTC AACATCGAAG AACTTGATAT TATCCAGCTG 
    GGTGTGGAGG AAGCACCTGA AGTCCCAGAA AGAGTCCGGG AGAACGTAAC GCCAGGAAAG 
    CCGTCTCTTT ATATCCGCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002178570.1
    CDS1..3261
    Translation

    Target ORF information:

    RefSeq Version XM_002178534.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002178534.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    ATGACAATCG AAACAGAGTC TGGTGCCGTA TCGGGAACTC GAGGAACTGC CAAACGTGAT 
    ACGTTGCGAG CGAACGAAGT CGCTGTGCAA AAGATTTGGG ACGAAGAGAA GGTGTTTGAA 
    ACGGAACCCG ACGATCGTGA AAGTTTCATG GTGACTTTTC CATACCCTTA TTCGAATGGT 
    CATTTGCACA TTGGACATGC ATTTTCCTTG ACGAAGGCAA TTTTCCGAGC TCAATTCGAG 
    CGCCACCGAG GCAAGAATGT GCTGTTTCCA TTTGCCTTTC ATTGCACAGG CATGCCAATT 
    CAAGCGGCAG CGAATAAGCT AACATCGGAG ATTGAATTGT ATGGATGCCC TCCTCAGTTT 
    CCGGAAGCCG ATCCTGAAGT CCGTGCCAAG ATGGAAGCAG AAATTGCCGC CTCGAAAGAA 
    GCCAAGGCGG CCCAACCTGA AAATAAGTCA AAAGGGAGCA AGACAAAGCT TGTGCAAAAG 
    ACCGGAACGG GAATTGTGCG ACAGTGGAAC ATTCTCCTCA AAATGGTTCC GGAAGATGAG 
    ATTCCGGCAT TCCAGGATCC TTTGCATTGG CTGAGCTACT TTCCTCCAAT TGGTGTAGAC 
    CACTTACACA ACTTTGGAGC AGGCGTGGAT TGGCGGCGGG CGTTTATAAC TACGTATGTC 
    AATCCATACT ATGATGCATT CATTCGTTGG CAGTTCGAGG TATTGAAAGA GAAAGGCAAG 
    ATCCTTTTTG GGAAACGTAA CAATGTGTTC TCGCTGGTTG ACGGACAAGT TTGTGCAGAT 
    CACGATCGTT CGGAAGGTGA AGGTGTAGGA CCTCAGGAAT ATGTCCTGAT TAAGCTTAAA 
    GTGCTGCAGC CAGGCCACGG ACAGTCCCGC CATGCGAAGA TGGAAGCAAT TTTGGCGAAA 
    TATGACCAGC CTGTATATTT TGTCCCTGCT ACCCTGCGCC CTGAAACTAT GTACGGACAA 
    ACCAACTGCT TTGTCCTCCC TGACGGTGAA TACGGTGCCT ATATGATTGA TGCAACGAAC 
    GAAATTTTTA TCATGAGTGC GAGATCGGCT CGGGGACTCT CATGCCAATC ATACCAGGGA 
    AATGAATACT TTACCAAAGA GTTTGGTAAA ATCCTGTGTC TCGAAACGTT TACAGGTAGC 
    GAATTGCTGG GCTTGCCGTT AAAAGCTCCG ATGGCGAAGT ACGATAAGAT TTATACCCTT 
    CCATTGTTGA CGATAAGCAT GGGCAAAGGA ACTGGAGTGG TGACATCCGT CCCTAGTGAC 
    GCTCCCGATG ACTTTGTTTC ACTTAAAGCG CTACAGGACA AACCCGACTT TCGCGCGAAA 
    TACGGCATTA CGGACGACAT GGTCATGCCG TACGAAGTTG TTCCAATCAT CACAATAGAA 
    GGATACGGCG ATGCGTCTGC TGTCTTTATG TGTGAAAAGC TAAAGATTAC AAGCTTCAAC 
    GATAAGGCTA AGCTTCAGCA AGCCAAGGAT GAGACATACC TTAAGGGTTT TAATATGGGA 
    ATTATGAAAG TCGGAAGCCA TTCCGGAAAG AAGGTCAGCG ATGCCAAACC AATTATCAAG 
    CAGGAATTGA TTCTTGCTGG CCAGGCGTGT CTGTACTTTG AACCAGAATC TAGGGTGGTT 
    TCCCGAACGA GTGACGAGTG TGTTGTCGCT TCTACAGATC AGTGGTATCT GGCATATGGA 
    GAGGAGTCGT GGACTAAAGC TGTTAAAAAG CACGTCTTGA ACTCGGATAA TTTCAACGCA 
    TATGACCCGG CTGCTTTGCA CAAGTATGAC TACACCATTG GCTGGTTGCA AGAATGGGCG 
    TGTACTCGGC AGTTCGGTCT GGGAACATTC TTGCCATGGG ATAGAGCCTG GGTTATTGAG 
    AGTTTGTCGG ACAGCACTAT CTACATGTCC TTTTATACTA TCGCACATTT TCTCCAGGGA 
    GAAGGCAATT TGACAGGTGA CAAATCAAAG TCTCCTTGCA GCATTGATCC TGCAGATTTG 
    TCAAATGACG TATTTGATTT CATTTTTCGC AAAGGACCAT TGCCAAGTGA CTCAAATATC 
    CCGGCCAAGA CATTAGAGAA GATGCGTACC GAGTTCCGTT ATTGGTACCC GATGAATTTA 
    CGTGTGAGCG CGAAAGACTT GATTCAGAAC CATTTGACTA TGGCGCTTTT CAATCATGCC 
    GCTGTTTGGG AGGAGGAACC AGAGCTATGG CCCAAAGGAT ACTACTGCAA TGGGCATGTC 
    CTTGTGGATG CCGAGAAGAT GTCAAAGTCG AAGGGGAACT TCTTGATGAT GAATGATACA 
    ATACAAACGT ATGGTGCGGA TGCCACCCGG TTTGCCTGTG CCGACGCTGG CGACTCGTTA 
    GATGATGCGA ACTTCAGCCG AGAGACAGCC GACGCCGCCA TTCTATCTCT TATCACGGAA 
    GATGCATGGA TAAGTGAAAC GCTCACATCT GTGGACCTTC GATCCGGCGA AGAAAATCTG 
    ATCGATAAAA TTCTGTTGAA CGAAACAAAC CGCCTAATTG CTAGTGCTGG TAGTAATTTT 
    GCTCGAATGC AATTCAAGGA AGGACTTAAG GAAGGATGGT TTGAGATGCT CAACGCCCGC 
    AATGACTATC GAGCCTGGTG CAAGGATAGC GGTGTTCCAA TGCACAAAGG TGTAGTTCTA 
    CGGTGGGCAG AGACCATTGT AATTTTGATT TGCCCGATTT GTCCGCATTG GTCCGAGAGG 
    ATATGGAAAC AGATCGGAAA CATCGGGTTG GCCATTCGGG CACCATGGCC GGTGGCGGAG 
    GAAGAAGACA AAATTTTGAC TCGACAAGCC AAGTTTTTGA GAGATTCTAT AAAGCACTTC 
    CGTTCCCAGG CTGGGAGAGC AAAGAAGGGG TGGATGAGGG CTTCTATTCT TGTAAACGAT 
    AGCTATCCTC AGTGGAAGAT TGATACGCTT GTATGGATGC AAGGCCAGTA CGATGTATCG 
    TCTGGATTTT CTCCAGGATT CATGAAAGAC CTAAAGGATT ATACTGCAAA GTTTGTGAAA 
    GACAAGAAAT TGATCAAGTT TACAATGCAG TTCGCCTCAT TCATGAAGAA AGAAACAGAG 
    GATGTAGGTG ACGCCGCGCT CGACGTTCTG CTTCCCTTTG ACCAGAAAGA GATACTTCAG 
    GTAAGTATTG AATACATTAA GGCGCAGCTC AACATCGAAG AACTTGATAT TATCCAGCTG 
    GGTGTGGAGG AAGCACCTGA AGTCCCAGAA AGAGTCCGGG AGAACGTAAC GCCAGGAAAG 
    CCGTCTCTTT ATATCCGCTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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