ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_42900 cDNA ORF clone

PHATRDRAFT_42900 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_42900 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_42900 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb01133 XM_002176757.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_42900 ( XM_002176757.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002176793.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb01133
    Clone ID Related Accession (Same CDS sequence) XM_002176757.1
    Accession Version XM_002176757.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2610bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011669). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCACCGT CCGCGGAATC CCAAGAATCC ATGCATGTCC ACAAACCATT TTTCAATGAA 
    AAATATGTTC CCGTCCCAGC GATCGATTTT AGCAAGAACG TCACGGCCGC GATCAATTAC 
    GAAGTTTCGC TCGTGGACGA GTTCGTTGCT TCCCAGCGCA AGCGCCGAAG GCGTACCAAC 
    TCGACTACGA CGGATGCAGA AGCCCTACCC TTGAATACCA AAACATCCAA CACCGAAAAT 
    AGTACCCCGA ACGCCGATCG CGACCGCCAT ACCGTCAACA AAACCAACAC TTTTGTACAA 
    ACCCCTCCTT CGAAAGAAAT CTTGAATGAT TGCAAAAAGA GCAGATCGAA GGAACAGACG 
    CGTCGTTCGG CGCGCGACAA AGGGAAACGT GAATTGACTC TTGCGCGCGT CCGTGTGCGC 
    TACGATATGC AATTGGTTCC AGTCGTTCAT CGCAACCGCA AATTTTTGCA GTCCTTTCCT 
    GCCTGGTGGA AAACACCTGA ACCGAAACTT GCTCGCCGTT TATCGTCTCG ATTGACCACC 
    GAAGCTACGG AAGCCGTGTC TTGCCGGCTT TGTCAAACCC CCACCGCATT GGCGACCAAT 
    ACTCCCTTTT TGGAAAACTC GTCCGTCATT TGGATTCCTT CCAAGCGTTC CGAATGGGAA 
    GATACGGTTT CCGAGATGAC GGCGGTGTGT ACCTCAGGTG CTCTACGACG GCACGTCATG 
    ACGCAAGGCC GTGCCTCGAC TTCCAAACCA TTTCATGCTC CACTCTCCCG TGACTACATT 
    CGAGATCGTG TAGACATTGA CGACCCTTTG TTGGGCTACC AACTGCGACA CAAAGAAGGT 
    GGATGGCTAC AAGGGTTTGT GATGTTTACG AACTTTACCA CCTGGACGCA TGGATTCCGT 
    TGGGATTCTT TACACTCAAA GAGCGGAATC CCTGCTTTTT GCAATACTAC CAACAGTGCA 
    TCTATGAATC CACAATTTGT AGATGCCGAT GGCTCTCTTG CGTTGGAGCT GGAATCGATG 
    GAACGATCAG GCGATCCCTT GCGGGAAGGG ATCGTTTTCC CCCAGCTTGC TGAAATTGGA 
    CTGGTTGGAG GTTTGGGATG TGGGGAGTAT CTGTTGCGCA TGGCTTTGGA CCATATTAGG 
    ACGAAGGGAC AGTACAAGTA CGTCGTGTTA CAAGCAACTG ATTCATCTAA ATCTTTCTAC 
    GAACGCTTCG GTTTTATCCG TGTTGGTGCC GTTTGCATGT ACATGGGTCA GGACGCTTCG 
    AAGCAGGCGG ACAATGAGCT CGTAGGATAC CGTCATTGGA CGCATGCCAA CGAATCCCAA 
    ACAAGCTTGC ATTTGCACGG TGGCCCAAGC TATATGATGT GTTTGAAGTT ACCGACCGGA 
    ATTACACAGT GTTGCTCCGG GTGTAGGCTC CCAAATAGTC TACAGAAACG CCCGTCATTT 
    TTGGAAGCCA TGCTGTCTTT GCAGGTCTTG CGGAAGCCCG CTATCACCTC ACTTGGCGGA 
    TCTTCAACAC TGACCACCAC AACACCGAAA CTTTCCCGAA AGAACAGCGA TTCTGCTTCT 
    GCAGACGACG CCTCGCATAG CGAAGTCAAA AAGAATCTCG GACGCCGGCC AACCACTCCA 
    CATCATCGAC GAAAGAGCAA TACTCCTTCG AAGGAAGGTC CATCCTCAGT AACAAAACGA 
    TCATATGACT CCGATGCCCC ATCCCAAGAC CCTTCAAAAA AGAAACGCAA GGCCAACGGT 
    ACCACGGAGA AGATTTCTCG CGACCGTCTG CTTTCGGCTC CGAAAGGCGG AGTGTCACTG 
    TCGTACGCAC AGAAACAATA CCAAAGCGTT TGGTTGGCCG TTCCACCCAC TGAACCAAAA 
    GTAGGGCGCC CGCCCCCAAA GCCACGCTCA CAGGGAACCG GAGCTTCGGA TGGAGACAAC 
    GCGAAGGCGA ATCAAAATAT TCTTGGTGCT GGCAGCAAGA TTAAGTTCAA GATTGCGATT 
    GTGGACGGCA AGGAGAGACT GTACCACTCC GTCCGTGGAA TTGACGGTCG CTTTGTCCGG 
    ATTTATGCAG ACGAGGGATC GTTTGCTTCA ACTATCGCAC CGAATCTGAT GCCTCAAGCA 
    GTCAAAGCTG CTGCGTCAAA ACAGGAGATC AAATTCGAGC CTAAAGACGC CGAGCGTACG 
    AAGACAAGTA ACCCAAGGCC CAAACCAGTC GATACGCCTT TACCCCCTCC TTCTGTCCCG 
    CTCATGCCGC ATCCGTCTGG AAAACCACAA CCGATCGAAA AATCTTCTTT AAAAAAGCAA 
    AAAGTCCGCT CTTATCCGAG AAGTCGAGTT CATTACTTCA ACCGTGTTGT AAAAGCCGTC 
    AAGGCTGGTC CATCACCGAC GTACTATTTT GTGTTGCATT ACGATGAAGA CCGCAAGTGG 
    ATTCGAATCG TTCCGATCGA ACCTAAGGGG TCTCTGACGG GAAAATGCGA AGGCCGTGCT 
    CGCTACCAAG CAGTGCTTGC AGACACAGAT GAGAATCTTA TCTCTGCCAG CATCAACGAT 
    TTTCAGGTTG TTCCAGCCTC CATGATAATG AAAACTCCTC TTGTCTCTCA AGAAGCTTGG 
    GATGTCAATG ATCGGGACAC GCCGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002176793.1
    CDS96..2705
    Translation

    Target ORF information:

    RefSeq Version XM_002176757.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002176757.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCACCGT CCGCGGAATC CCAAGAATCC ATGCATGTCC ACAAACCATT TTTCAATGAA 
    AAATATGTTC CCGTCCCAGC GATCGATTTT AGCAAGAACG TCACGGCCGC GATCAATTAC 
    GAAGTTTCGC TCGTGGACGA GTTCGTTGCT TCCCAGCGCA AGCGCCGAAG GCGTACCAAC 
    TCGACTACGA CGGATGCAGA AGCCCTACCC TTGAATACCA AAACATCCAA CACCGAAAAT 
    AGTACCCCGA ACGCCGATCG CGACCGCCAT ACCGTCAACA AAACCAACAC TTTTGTACAA 
    ACCCCTCCTT CGAAAGAAAT CTTGAATGAT TGCAAAAAGA GCAGATCGAA GGAACAGACG 
    CGTCGTTCGG CGCGCGACAA AGGGAAACGT GAATTGACTC TTGCGCGCGT CCGTGTGCGC 
    TACGATATGC AATTGGTTCC AGTCGTTCAT CGCAACCGCA AATTTTTGCA GTCCTTTCCT 
    GCCTGGTGGA AAACACCTGA ACCGAAACTT GCTCGCCGTT TATCGTCTCG ATTGACCACC 
    GAAGCTACGG AAGCCGTGTC TTGCCGGCTT TGTCAAACCC CCACCGCATT GGCGACCAAT 
    ACTCCCTTTT TGGAAAACTC GTCCGTCATT TGGATTCCTT CCAAGCGTTC CGAATGGGAA 
    GATACGGTTT CCGAGATGAC GGCGGTGTGT ACCTCAGGTG CTCTACGACG GCACGTCATG 
    ACGCAAGGCC GTGCCTCGAC TTCCAAACCA TTTCATGCTC CACTCTCCCG TGACTACATT 
    CGAGATCGTG TAGACATTGA CGACCCTTTG TTGGGCTACC AACTGCGACA CAAAGAAGGT 
    GGATGGCTAC AAGGGTTTGT GATGTTTACG AACTTTACCA CCTGGACGCA TGGATTCCGT 
    TGGGATTCTT TACACTCAAA GAGCGGAATC CCTGCTTTTT GCAATACTAC CAACAGTGCA 
    TCTATGAATC CACAATTTGT AGATGCCGAT GGCTCTCTTG CGTTGGAGCT GGAATCGATG 
    GAACGATCAG GCGATCCCTT GCGGGAAGGG ATCGTTTTCC CCCAGCTTGC TGAAATTGGA 
    CTGGTTGGAG GTTTGGGATG TGGGGAGTAT CTGTTGCGCA TGGCTTTGGA CCATATTAGG 
    ACGAAGGGAC AGTACAAGTA CGTCGTGTTA CAAGCAACTG ATTCATCTAA ATCTTTCTAC 
    GAACGCTTCG GTTTTATCCG TGTTGGTGCC GTTTGCATGT ACATGGGTCA GGACGCTTCG 
    AAGCAGGCGG ACAATGAGCT CGTAGGATAC CGTCATTGGA CGCATGCCAA CGAATCCCAA 
    ACAAGCTTGC ATTTGCACGG TGGCCCAAGC TATATGATGT GTTTGAAGTT ACCGACCGGA 
    ATTACACAGT GTTGCTCCGG GTGTAGGCTC CCAAATAGTC TACAGAAACG CCCGTCATTT 
    TTGGAAGCCA TGCTGTCTTT GCAGGTCTTG CGGAAGCCCG CTATCACCTC ACTTGGCGGA 
    TCTTCAACAC TGACCACCAC AACACCGAAA CTTTCCCGAA AGAACAGCGA TTCTGCTTCT 
    GCAGACGACG CCTCGCATAG CGAAGTCAAA AAGAATCTCG GACGCCGGCC AACCACTCCA 
    CATCATCGAC GAAAGAGCAA TACTCCTTCG AAGGAAGGTC CATCCTCAGT AACAAAACGA 
    TCATATGACT CCGATGCCCC ATCCCAAGAC CCTTCAAAAA AGAAACGCAA GGCCAACGGT 
    ACCACGGAGA AGATTTCTCG CGACCGTCTG CTTTCGGCTC CGAAAGGCGG AGTGTCACTG 
    TCGTACGCAC AGAAACAATA CCAAAGCGTT TGGTTGGCCG TTCCACCCAC TGAACCAAAA 
    GTAGGGCGCC CGCCCCCAAA GCCACGCTCA CAGGGAACCG GAGCTTCGGA TGGAGACAAC 
    GCGAAGGCGA ATCAAAATAT TCTTGGTGCT GGCAGCAAGA TTAAGTTCAA GATTGCGATT 
    GTGGACGGCA AGGAGAGACT GTACCACTCC GTCCGTGGAA TTGACGGTCG CTTTGTCCGG 
    ATTTATGCAG ACGAGGGATC GTTTGCTTCA ACTATCGCAC CGAATCTGAT GCCTCAAGCA 
    GTCAAAGCTG CTGCGTCAAA ACAGGAGATC AAATTCGAGC CTAAAGACGC CGAGCGTACG 
    AAGACAAGTA ACCCAAGGCC CAAACCAGTC GATACGCCTT TACCCCCTCC TTCTGTCCCG 
    CTCATGCCGC ATCCGTCTGG AAAACCACAA CCGATCGAAA AATCTTCTTT AAAAAAGCAA 
    AAAGTCCGCT CTTATCCGAG AAGTCGAGTT CATTACTTCA ACCGTGTTGT AAAAGCCGTC 
    AAGGCTGGTC CATCACCGAC GTACTATTTT GTGTTGCATT ACGATGAAGA CCGCAAGTGG 
    ATTCGAATCG TTCCGATCGA ACCTAAGGGG TCTCTGACGG GAAAATGCGA AGGCCGTGCT 
    CGCTACCAAG CAGTGCTTGC AGACACAGAT GAGAATCTTA TCTCTGCCAG CATCAACGAT 
    TTTCAGGTTG TTCCAGCCTC CATGATAATG AAAACTCCTC TTGTCTCTCA AGAAGCTTGG 
    GATGTCAATG ATCGGGACAC GCCGGTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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