ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_49168 cDNA ORF clone

PHATRDRAFT_49168 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_49168 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_49168 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb05982 XM_002183779.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_49168 ( XM_002183779.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002183815.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb05982
    Clone ID Related Accession (Same CDS sequence) XM_002183779.1
    Accession Version XM_002183779.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1794bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011689). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCTGACA AAAACTGCCA GGCCTTAACC TTGGACTTTA TTGCCGTAGA GGACGACGCG 
    GAAATGATCG CCGTGGAGGA TGAGATTCGC CGGGACTTGA AAGAAATTGG CGTTACAGTC 
    AATACCCGTT TTCTTAGCCG AGAGGATTAC ATTGAAGCTG AGTTGAATGG TGACTATAAC 
    ATGCTCTTCA CTCGTACCTG GGGTGCCCCG TACGATCCTC ACAGCTATTT CAATTCGTGG 
    GCCGTTCCAA GCCACGTCGA GTACACGGCC ATTGACACGT TAGAAGCACC TCTTAGTCGC 
    GAGCTCCTTT TGAAAAAGAT TGAAAATGTG CAGAAGGAAC TAGATGAGAT GCAGATTCAG 
    GCACAGTGGC GAGAGATCTT GAACGATGTC CATCAGCAGG CCATCTTTTT GCCGCTCTGG 
    GGCACCCGAA TTCCATACGT GATCAACCGT CGTCTTTCAG GGTTTACGCC AAGTGATCAG 
    GCCTTTACGT ATCCATTAAG TAGCATTCGT ATCTCAAGCG GATCTGCCAA CATCACCATC 
    GCGCCGGGTT CCGGCGGCTC GCTCTTCACG TCGGTCGGAC CCTTGAATCC TCACCAGTAC 
    TTTCCCAATC AGATTTTCGC CAGCGATTGG ATTTACGAAG GCCTCGTGAA TTACGGACAA 
    GATGGTGAGA TTGTTCCATC GCTAGCATCG GAGTGGACTA CGGAACGCAC TGCCGAAGGA 
    CAGCGCGTTA TCTTCCAGCT TCGTGAAGGC GTCAAATTTC ACGATGGCAG TGATTGGAAC 
    TGCACTGTCG CCAAGCTCAA CTTTGACCAC ATTTTTTCCG ACACGGTCCG CGAACGTCAT 
    TCCTCATTTG GAGCTACAGC GAATCTCAAG AGCTGGACGT GCAATCAGAA TGGGGAGTTT 
    GTTTTGGAAA CGTCCGCACC GTTTTACCCT CTGCTCCAAG AGCTTACGTA TAGTCGCCCG 
    TTTGTTTTTG CGTCTGCTAG TTCCTTTGCT GCAGGCATTG ACTCTGATCC AGAGACTCAA 
    AACTCATGTG AATCCGGAGA TTTTGGGTCC AAATGGGACT ATCTTGAGGA GTTTGTTACC 
    TGCCTCGGTC TCTCGGCTCC CATTGGTACG GGACCGTTCA AATTTGCGGA TCGTGAATAC 
    CTCCCGGGAA CGAACGAGAC AATGGATGCC AAGGTTACGT TTGCGCGCCA CGAAGACTAT 
    TGGGGTGGCT TGCCCGCAAT CGAATTCCTT GAAATAATCC ACTTTGAGGA TACGGATGCG 
    GTCGAAGCCG CGTTATTTGA CGGTCAGCTG GATATGGTTT TGGGCTCCGG TCCCCTTTCT 
    GCCAAACAAG TTCAGAATAT CAAGTTTGTA CATAGCGACA AGTTTGATGT CCGCCACAGT 
    GCAGTTTTAC AGAATGCACT GGTTGTCTTA AACTCTGGTA AGGCACCAAC GGATGACATC 
    CAAACACGCC AAGCCATTAT TCACGCCGTC AACAAAGCAA TCTTTATTGA AGATGAGTTT 
    GCGGGCTTGG AACAAGCCGT TTCGCAGCTT TTGCCGCTCA CCGCACCGTA CAGTAACGTT 
    GATCTCAATC CAAAGTGGAA TTACGATTTG GAAAAAGCCA GATTTCTCAA CTGCCCTGCA 
    GATATGAATG GCAGCTCGGA GGACAGCTTG TCGGGTGGTG CAATTGGGGG TATTGTTGCG 
    GCAATTTTGG TGGTACTGGC AATGGCTGTC TTTTTGGGAC GTTTGATTCT ACGCGAAAAA 
    CAGGGGAAGC CAATGTTTGC CCCAGAAAAG ATACGCAAGG GCGAACAAGC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002183815.1
    CDS1..1794
    Translation

    Target ORF information:

    RefSeq Version XM_002183779.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002183779.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCTGACA AAAACTGCCA GGCCTTAACC TTGGACTTTA TTGCCGTAGA GGACGACGCG 
    GAAATGATCG CCGTGGAGGA TGAGATTCGC CGGGACTTGA AAGAAATTGG CGTTACAGTC 
    AATACCCGTT TTCTTAGCCG AGAGGATTAC ATTGAAGCTG AGTTGAATGG TGACTATAAC 
    ATGCTCTTCA CTCGTACCTG GGGTGCCCCG TACGATCCTC ACAGCTATTT CAATTCGTGG 
    GCCGTTCCAA GCCACGTCGA GTACACGGCC ATTGACACGT TAGAAGCACC TCTTAGTCGC 
    GAGCTCCTTT TGAAAAAGAT TGAAAATGTG CAGAAGGAAC TAGATGAGAT GCAGATTCAG 
    GCACAGTGGC GAGAGATCTT GAACGATGTC CATCAGCAGG CCATCTTTTT GCCGCTCTGG 
    GGCACCCGAA TTCCATACGT GATCAACCGT CGTCTTTCAG GGTTTACGCC AAGTGATCAG 
    GCCTTTACGT ATCCATTAAG TAGCATTCGT ATCTCAAGCG GATCTGCCAA CATCACCATC 
    GCGCCGGGTT CCGGCGGCTC GCTCTTCACG TCGGTCGGAC CCTTGAATCC TCACCAGTAC 
    TTTCCCAATC AGATTTTCGC CAGCGATTGG ATTTACGAAG GCCTCGTGAA TTACGGACAA 
    GATGGTGAGA TTGTTCCATC GCTAGCATCG GAGTGGACTA CGGAACGCAC TGCCGAAGGA 
    CAGCGCGTTA TCTTCCAGCT TCGTGAAGGC GTCAAATTTC ACGATGGCAG TGATTGGAAC 
    TGCACTGTCG CCAAGCTCAA CTTTGACCAC ATTTTTTCCG ACACGGTCCG CGAACGTCAT 
    TCCTCATTTG GAGCTACAGC GAATCTCAAG AGCTGGACGT GCAATCAGAA TGGGGAGTTT 
    GTTTTGGAAA CGTCCGCACC GTTTTACCCT CTGCTCCAAG AGCTTACGTA TAGTCGCCCG 
    TTTGTTTTTG CGTCTGCTAG TTCCTTTGCT GCAGGCATTG ACTCTGATCC AGAGACTCAA 
    AACTCATGTG AATCCGGAGA TTTTGGGTCC AAATGGGACT ATCTTGAGGA GTTTGTTACC 
    TGCCTCGGTC TCTCGGCTCC CATTGGTACG GGACCGTTCA AATTTGCGGA TCGTGAATAC 
    CTCCCGGGAA CGAACGAGAC AATGGATGCC AAGGTTACGT TTGCGCGCCA CGAAGACTAT 
    TGGGGTGGCT TGCCCGCAAT CGAATTCCTT GAAATAATCC ACTTTGAGGA TACGGATGCG 
    GTCGAAGCCG CGTTATTTGA CGGTCAGCTG GATATGGTTT TGGGCTCCGG TCCCCTTTCT 
    GCCAAACAAG TTCAGAATAT CAAGTTTGTA CATAGCGACA AGTTTGATGT CCGCCACAGT 
    GCAGTTTTAC AGAATGCACT GGTTGTCTTA AACTCTGGTA AGGCACCAAC GGATGACATC 
    CAAACACGCC AAGCCATTAT TCACGCCGTC AACAAAGCAA TCTTTATTGA AGATGAGTTT 
    GCGGGCTTGG AACAAGCCGT TTCGCAGCTT TTGCCGCTCA CCGCACCGTA CAGTAACGTT 
    GATCTCAATC CAAAGTGGAA TTACGATTTG GAAAAAGCCA GATTTCTCAA CTGCCCTGCA 
    GATATGAATG GCAGCTCGGA GGACAGCTTG TCGGGTGGTG CAATTGGGGG TATTGTTGCG 
    GCAATTTTGG TGGTACTGGC AATGGCTGTC TTTTTGGGAC GTTTGATTCT ACGCGAAAAA 
    CAGGGGAAGC CAATGTTTGC CCCAGAAAAG ATACGCAAGG GCGAACAAGC TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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