ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_49054 cDNA ORF clone

PHATRDRAFT_49054 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_49054 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_49054 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb00462 XM_002183713.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_49054 ( XM_002183713.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002183749.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb00462
    Clone ID Related Accession (Same CDS sequence) XM_002183713.1
    Accession Version XM_002183713.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2562bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011688). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTCTCGCC CATATGATGG CCAGACTCCA GCAGAGCAGG CAACTTTCGC TCGTGAAGAG 
    CTTATGCATC TGGATGAGGA ATCTATGATG GACGACTACA ACGACGACGA GACGGAGAAT 
    AACCAAAGTT TTCTCAATTT GCTCCCGGAA GACGACGAAG CCGGAAACGA CGACCCGGCA 
    CAGCTCTTTG CCATTCTTGA AGATGCCATC AATCAAACCG CCAAACAAAC AGGCGATACA 
    GGGCGAGCTT TAACGGCGGT AGAACAACAG CAAAAGCGCG AAAACGCGGA ACACACGTGG 
    GACCGCGTGC GGCGCTGGAT GTGGGCGCAT CCGCAAGTGG AACAACGCCA AGCCGCCGCG 
    TTTATTCGCG GGCAGGCCGA CGCCACAGCG TTGCATCTCA TGTGCAAACT GCATAATCCT 
    CCCGACGATA TTATCCAAGC CATCGTCGAC TCCGCCGTCG ATGTTGTGTC CTGGACGGAC 
    GCGCACGGTT GGTTGCCTTT GCACCATGCC TGCGCTAACG GAGTGTCTCC GGAAACCATG 
    AAAGTCCTCG TGGATGCCTA TCCCGCCGGT AAGCTGCAAC AGGACAATAT GAGGCGAACA 
    CCGCTCCACT TTTATGCCAC GCGGAATTCC GATAGTACGG TTATCATGAC AACTAACACC 
    GAACTCCTGG CTGACGATGG CGCGGCCGAA CTCACCGATC GTGGCGGCAT GTTACCCATG 
    CATTACGCGT GTGCGTACGG GACCGACCCG GCCGTACTCG AAGTCTTGGC TCAGGTCTAC 
    CCCGCCTCTC TCACGGCCAA AGAAAACAAG GGTCGAACGC CGATGCATTT GGCCATGGTA 
    AATGCTCACC GCGACGCCAG TCCGAACGTG ATTCATTTCT TATTGGAGTA CGCTGAATCC 
    CGAGCGACCG TCAACGTACG CGATCAAGAC GGTTACCTAC CCTTGCATTT GTTGGCTCTC 
    GGTCTCAAAG GATACACGGC GGATGAATCC ACCAAACGCA GTAACGTGAG CGCTTGCTTG 
    AGTATGTACA TGGACGCGGA GCCTCAAGCC GCAGCCGACT TTTTGACGGC GATTCAGGAT 
    TTGCCGGATT GGCTTCAAGA TACTGCAGTC GTATCGAAAC ACGTGCGGAA CGTTTTGAAC 
    TACAAAATTG TTCAGCCCTT TCCCACGTCT ATTCTCATGT TGGACGGATA CTTTCTGATT 
    GTCCTGATTG TATGTTTTGC GTTCTCGACG AAATATTATA TTGATTTCCT CTTCGAGCCG 
    GAGAGCAACA AAACAGACAT TGACATTTAC ATTGTGTTCC TTTTCATTGG AGCGTCGTAC 
    TTTTTGATGC GCGAGCTGGT ACAAGTGGCT TCGTTGGTTA GTCTCGGCAG TTTCAGTAGT 
    TGGTGGTCAG ACGCCGCCAA TTGGTTGGAT GTTGGTGTAA TTACAATGGT TTACTACTAC 
    GCCATCTGTA TGAGCATGGA CAGCCCAGTG GATAGAAATC TTTTTCGAAG TGGCGCCGCC 
    TTTGGACAAG GAATTCTGTA CGTGGCAGTC ATCGTTTATC TCAAAAGCAC ATACGTCGAC 
    TTTGCCGTAT TCGTGGGTGG CGTACTGTAC GTCGTACAAC GGCTAACGGC ATTTCTGACT 
    GCCGTGGGTG TTATCTTGTT GGCCTTTGCC CAAATGTTCT ACTTTATATA TGTGGATGGC 
    GAAATGTGCA CCAACAGGCT GCAGCCCGAT GATCTAAACT ACGACGCAGA CCTTGACTGT 
    CGCTTTTCTC ATTGCTCCTT TGAAGAATCC CTTCTGCGAG TGTACAGCAT GATGATGGGA 
    GAGATCGGAG ATGAAAAACG CTATTCCGCG GGCCCGACGA GTCTAGTGGC ACAGATATTG 
    TACGTCGGCT ACGCCTTTTT GGTTGTCATT CTGCTGTCGA ATGTTCTTAT TGCCATTGTC 
    ACCGATAGCT ACGAAATTAT TCAGAACGAC CGCGCTGCGA TTGTATTTTG GACGAATCGG 
    TTGGATTTCG TGGCCGAGAT GGATGCCATC ACGTACGGAG CACAGCGTCG CCTTGGTTGT 
    TTTCGAAAAA AGAAGGCGCC CATGCAGGTA GAGGAAATTC CCAATGCCCC GGGATTAGTC 
    TCGGATGACT ACAATGACAG GAATGGCTCT TCCGACTTCT TTCGATACGG TTGGCAACAA 
    GTCATGCTCT TGTTTGACGC AAACCTGTAC GAAGAGATCG ATCCTATCGA GTCGCTGGTG 
    TACAATATTT TTCGAATCGC TTGTATTGTT TTCGTTATAC CGTTGTGGTT GATCATGGGC 
    GCGGCAACTG CTGGGTGGTT ATGGCCTCCA CAAGTACGAG AGGCTCTATT TTGTCAGAAA 
    GGCACGACCA CCTCTCGTTC GGAGATTGAG CGCAAAAAAC TCGAGCAGCT GCGAACTATT 
    CAAACCGATC TGACATCATT GAAGAGTGAT ATAGTGCGAG AAATGACTAG CGATCGCGAC 
    GAAATGATAC GAATGAAGCT GGAAGTGGAA GGAGTCCAGG CAGAAGTCTT ATCCGATCTA 
    ATACAAGTTC GAGAGCTTAT CACGTCGCTT CTTGGAACTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002183749.1
    CDS1..2562
    Translation

    Target ORF information:

    RefSeq Version XM_002183713.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002183713.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTCTCGCC CATATGATGG CCAGACTCCA GCAGAGCAGG CAACTTTCGC TCGTGAAGAG 
    CTTATGCATC TGGATGAGGA ATCTATGATG GACGACTACA ACGACGACGA GACGGAGAAT 
    AACCAAAGTT TTCTCAATTT GCTCCCGGAA GACGACGAAG CCGGAAACGA CGACCCGGCA 
    CAGCTCTTTG CCATTCTTGA AGATGCCATC AATCAAACCG CCAAACAAAC AGGCGATACA 
    GGGCGAGCTT TAACGGCGGT AGAACAACAG CAAAAGCGCG AAAACGCGGA ACACACGTGG 
    GACCGCGTGC GGCGCTGGAT GTGGGCGCAT CCGCAAGTGG AACAACGCCA AGCCGCCGCG 
    TTTATTCGCG GGCAGGCCGA CGCCACAGCG TTGCATCTCA TGTGCAAACT GCATAATCCT 
    CCCGACGATA TTATCCAAGC CATCGTCGAC TCCGCCGTCG ATGTTGTGTC CTGGACGGAC 
    GCGCACGGTT GGTTGCCTTT GCACCATGCC TGCGCTAACG GAGTGTCTCC GGAAACCATG 
    AAAGTCCTCG TGGATGCCTA TCCCGCCGGT AAGCTGCAAC AGGACAATAT GAGGCGAACA 
    CCGCTCCACT TTTATGCCAC GCGGAATTCC GATAGTACGG TTATCATGAC AACTAACACC 
    GAACTCCTGG CTGACGATGG CGCGGCCGAA CTCACCGATC GTGGCGGCAT GTTACCCATG 
    CATTACGCGT GTGCGTACGG GACCGACCCG GCCGTACTCG AAGTCTTGGC TCAGGTCTAC 
    CCCGCCTCTC TCACGGCCAA AGAAAACAAG GGTCGAACGC CGATGCATTT GGCCATGGTA 
    AATGCTCACC GCGACGCCAG TCCGAACGTG ATTCATTTCT TATTGGAGTA CGCTGAATCC 
    CGAGCGACCG TCAACGTACG CGATCAAGAC GGTTACCTAC CCTTGCATTT GTTGGCTCTC 
    GGTCTCAAAG GATACACGGC GGATGAATCC ACCAAACGCA GTAACGTGAG CGCTTGCTTG 
    AGTATGTACA TGGACGCGGA GCCTCAAGCC GCAGCCGACT TTTTGACGGC GATTCAGGAT 
    TTGCCGGATT GGCTTCAAGA TACTGCAGTC GTATCGAAAC ACGTGCGGAA CGTTTTGAAC 
    TACAAAATTG TTCAGCCCTT TCCCACGTCT ATTCTCATGT TGGACGGATA CTTTCTGATT 
    GTCCTGATTG TATGTTTTGC GTTCTCGACG AAATATTATA TTGATTTCCT CTTCGAGCCG 
    GAGAGCAACA AAACAGACAT TGACATTTAC ATTGTGTTCC TTTTCATTGG AGCGTCGTAC 
    TTTTTGATGC GCGAGCTGGT ACAAGTGGCT TCGTTGGTTA GTCTCGGCAG TTTCAGTAGT 
    TGGTGGTCAG ACGCCGCCAA TTGGTTGGAT GTTGGTGTAA TTACAATGGT TTACTACTAC 
    GCCATCTGTA TGAGCATGGA CAGCCCAGTG GATAGAAATC TTTTTCGAAG TGGCGCCGCC 
    TTTGGACAAG GAATTCTGTA CGTGGCAGTC ATCGTTTATC TCAAAAGCAC ATACGTCGAC 
    TTTGCCGTAT TCGTGGGTGG CGTACTGTAC GTCGTACAAC GGCTAACGGC ATTTCTGACT 
    GCCGTGGGTG TTATCTTGTT GGCCTTTGCC CAAATGTTCT ACTTTATATA TGTGGATGGC 
    GAAATGTGCA CCAACAGGCT GCAGCCCGAT GATCTAAACT ACGACGCAGA CCTTGACTGT 
    CGCTTTTCTC ATTGCTCCTT TGAAGAATCC CTTCTGCGAG TGTACAGCAT GATGATGGGA 
    GAGATCGGAG ATGAAAAACG CTATTCCGCG GGCCCGACGA GTCTAGTGGC ACAGATATTG 
    TACGTCGGCT ACGCCTTTTT GGTTGTCATT CTGCTGTCGA ATGTTCTTAT TGCCATTGTC 
    ACCGATAGCT ACGAAATTAT TCAGAACGAC CGCGCTGCGA TTGTATTTTG GACGAATCGG 
    TTGGATTTCG TGGCCGAGAT GGATGCCATC ACGTACGGAG CACAGCGTCG CCTTGGTTGT 
    TTTCGAAAAA AGAAGGCGCC CATGCAGGTA GAGGAAATTC CCAATGCCCC GGGATTAGTC 
    TCGGATGACT ACAATGACAG GAATGGCTCT TCCGACTTCT TTCGATACGG TTGGCAACAA 
    GTCATGCTCT TGTTTGACGC AAACCTGTAC GAAGAGATCG ATCCTATCGA GTCGCTGGTG 
    TACAATATTT TTCGAATCGC TTGTATTGTT TTCGTTATAC CGTTGTGGTT GATCATGGGC 
    GCGGCAACTG CTGGGTGGTT ATGGCCTCCA CAAGTACGAG AGGCTCTATT TTGTCAGAAA 
    GGCACGACCA CCTCTCGTTC GGAGATTGAG CGCAAAAAAC TCGAGCAGCT GCGAACTATT 
    CAAACCGATC TGACATCATT GAAGAGTGAT ATAGTGCGAG AAATGACTAG CGATCGCGAC 
    GAAATGATAC GAATGAAGCT GGAAGTGGAA GGAGTCCAGG CAGAAGTCTT ATCCGATCTA 
    ATACAAGTTC GAGAGCTTAT CACGTCGCTT CTTGGAACTT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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