ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_48536 cDNA ORF clone

PHATRDRAFT_48536 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_48536 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_48536 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb00069 XM_002183127.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_48536 ( XM_002183127.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002183163.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.
    Price & Availability↑
    CloneID OPb00069
    Clone ID Related Accession (Same CDS sequence) XM_002183127.1
    Accession Version XM_002183127.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011686). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTGGAT GGTGGTGGGC CCCACAAGCG ACTGCAGTCG CGTCTTGTGA ACCTCCAGCT 
    GGGAAGACCT ATTTGACCAT AGGCCAAGAC CTGGCTGCGA TTCAAGACTA CGTCACGGAT 
    CAGTTCTCGT ACAGTTTGCA CCGAGCTCAA ACAAGGCAGA AGAAGGGTTT GAAATTAAAC 
    GATATGCGAC TCGACTGGTA TCGCGTTGCT CTTTCTCACG TCTTAACCTT TGCTCAATTT 
    TTACGCCCTT ACGTGCCTAG GAATGAAATC GCCGTGGGAC CGATTCCGCC GCTGACGGTG 
    GCAGACTTTT TGCCAGCCGC AACCATGGTC TACACGGACA TCCAGACGCT CAGCGGTTTG 
    AAAACACCGA TCGACTACGG TAGCGGCGTC CAGGACGCCG TCGGCGTCAC TCTGGAAGGA 
    CAGGTACCTG GTCTCCAAAT TGGCTTGTGG TTAAACGGCA CCACCGGATG TGCGGATATT 
    ATGGCGGGAA AGTTAAAGGC AGAGATTGAC TCGTTGATGA CCTTTCTGAC AAACGAAAGC 
    AACGCCACCA AGGTCTTTTT GCGCGTTGGA TACGAGTTTG ACAATCCAGG TTTTGGGTAC 
    AATAGTGATC CGGCGCTCTA CACGAAAGCC TACGTCAAGA TTGTCAACAG TTGCCGTTTC 
    TGGCCGGCTT GCCGCAACAA GGTCATCTTT GTTTGGCATT CGTGGGGAGC CGGTTTACCC 
    GCGAATACCA CACTAGCCGA CTTTTATCCT GGCGATGATG TCGTCGATTG GGTCGGGGTG 
    AGCATTTTTT CCCAGTTCTA CCAGCACTAT CCTAGTCTCG GCAGTATCTC GACATTGAAC 
    AACGTCTTGG ACTTTGCCAA CTTCCACAAC AAACCCACTA TGATCGCGGA ATCGACGCCG 
    TTTGGAGGGG TTCATGTCTT GAAAGACCCC TGGAGAGATT GGTATCATCC AGTACTGAAA 
    ATAATCAATG CGTACGATAT TGGTATGTGG AGCTACATTG ATTGCGACTG GGACTCTCTG 
    TCTATGTGGA ATGGAACGGG TTTCGGAGAC TCGCGCTTGG CGGCGAACCA AACAATCACA 
    CGCCTTTGTC AAAAATATGT TTTGAAGAAT CCACGTTTCG TTCAGCACGC AGGCCTTTGT 
    GCCGTCGGCC CCGCCAAAAC AGGTACACGA GTCTCTAAAA AGGGTGGCAA AAAGCCATTT 
    GATTGGACAG AATGGATGAG TAAGGGCAAA AAAGACAAGA TGGATAATGT AGACGAGGGC 
    AACACATTTG GATGGGATAG CGACGGCAGC AGTGGACGCT TAGATCTTTT GGCTGCGAGG 
    GGGAAGGATG GTTTTCTTAT AGCTAATGGT TCGTCCTTTT TCTTTGTGGG GGGCATCCTT 
    ATTGCCTTGC TTGCCTCGCT TTGGACTCAT CGACGACATC GTCGCCGAGG ATACGAAACC 
    ATCAATGAAC TGTTGGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002183163.1
    CDS141..1601
    Translation

    Target ORF information:

    RefSeq Version XM_002183127.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002183127.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTGGAT GGTGGTGGGC CCCACAAGCG ACTGCAGTCG CGTCTTGTGA ACCTCCAGCT 
    GGGAAGACCT ATTTGACCAT AGGCCAAGAC CTGGCTGCGA TTCAAGACTA CGTCACGGAT 
    CAGTTCTCGT ACAGTTTGCA CCGAGCTCAA ACAAGGCAGA AGAAGGGTTT GAAATTAAAC 
    GATATGCGAC TCGACTGGTA TCGCGTTGCT CTTTCTCACG TCTTAACCTT TGCTCAATTT 
    TTACGCCCTT ACGTGCCTAG GAATGAAATC GCCGTGGGAC CGATTCCGCC GCTGACGGTG 
    GCAGACTTTT TGCCAGCCGC AACCATGGTC TACACGGACA TCCAGACGCT CAGCGGTTTG 
    AAAACACCGA TCGACTACGG TAGCGGCGTC CAGGACGCCG TCGGCGTCAC TCTGGAAGGA 
    CAGGTACCTG GTCTCCAAAT TGGCTTGTGG TTAAACGGCA CCACCGGATG TGCGGATATT 
    ATGGCGGGAA AGTTAAAGGC AGAGATTGAC TCGTTGATGA CCTTTCTGAC AAACGAAAGC 
    AACGCCACCA AGGTCTTTTT GCGCGTTGGA TACGAGTTTG ACAATCCAGG TTTTGGGTAC 
    AATAGTGATC CGGCGCTCTA CACGAAAGCC TACGTCAAGA TTGTCAACAG TTGCCGTTTC 
    TGGCCGGCTT GCCGCAACAA GGTCATCTTT GTTTGGCATT CGTGGGGAGC CGGTTTACCC 
    GCGAATACCA CACTAGCCGA CTTTTATCCT GGCGATGATG TCGTCGATTG GGTCGGGGTG 
    AGCATTTTTT CCCAGTTCTA CCAGCACTAT CCTAGTCTCG GCAGTATCTC GACATTGAAC 
    AACGTCTTGG ACTTTGCCAA CTTCCACAAC AAACCCACTA TGATCGCGGA ATCGACGCCG 
    TTTGGAGGGG TTCATGTCTT GAAAGACCCC TGGAGAGATT GGTATCATCC AGTACTGAAA 
    ATAATCAATG CGTACGATAT TGGTATGTGG AGCTACATTG ATTGCGACTG GGACTCTCTG 
    TCTATGTGGA ATGGAACGGG TTTCGGAGAC TCGCGCTTGG CGGCGAACCA AACAATCACA 
    CGCCTTTGTC AAAAATATGT TTTGAAGAAT CCACGTTTCG TTCAGCACGC AGGCCTTTGT 
    GCCGTCGGCC CCGCCAAAAC AGGTACACGA GTCTCTAAAA AGGGTGGCAA AAAGCCATTT 
    GATTGGACAG AATGGATGAG TAAGGGCAAA AAAGACAAGA TGGATAATGT AGACGAGGGC 
    AACACATTTG GATGGGATAG CGACGGCAGC AGTGGACGCT TAGATCTTTT GGCTGCGAGG 
    GGGAAGGATG GTTTTCTTAT AGCTAATGGT TCGTCCTTTT TCTTTGTGGG GGGCATCCTT 
    ATTGCCTTGC TTGCCTCGCT TTGGACTCAT CGACGACATC GTCGCCGAGG ATACGAAACC 
    ATCAATGAAC TGTTGGTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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